Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1213 ATGGGAAATACCTTAGGAGGCAAAAAAACCACGAAGGTAATGAAAATAGATGGAGAAACCTTCAAGCTCAAGACTCCATTGAAGGCTGGTGATGTTCTCAAGGACCATCCTGGTTTGGTTCTGCTAGATTCTGAAGCAGTGAAGCATTATGGTATGAGAGCTAAGCCTCTGCAACCTCACAAAGATTTGTTGCCTAAGAGACTGTATTTTCTGGTGGAGCTTCCGAAGGAGACAGTGACAGTTCCTAGAAGGGTTCGTTCCGAGATCAACATGAGCGCGAAAGATCGCCTCGAGAGCCTCATGCTCGCTAGAAGATCTGCCTCTGATCTGTCCATTATCAAACAAATTAATGAGAAGAATGTGCATGATGGTGTTGCAGATCAGGAGATGGACGTTAATGGCGGCGGCGGCGGTGGAGTGAGGTTGAAGATGAAGCTTCCTAGGGCTCAGGTTGAGAAGCTTGTGAGAGAAGCCAAAGATGAAGCTGAAGCTGCACACAAGATTATGAGTCTTTGCATGCAGAAAGAAGCAGAGAGTAATACAAAGACACGTGAGAGGAGAGTGAGTTTCATGCCCATCAGCAAAGAAATTAGTGAAATAGCTGTGGCTTCTTGA 615 0.4569 MGNTLGGKKTTKVMKIDGETFKLKTPLKAGDVLKDHPGLVLLDSEAVKHYGMRAKPLQPHKDLLPKRLYFLVELPKETVTVPRRVRSEINMSAKDRLESLMLARRSASDLSIIKQINEKNVHDGVADQEMDVNGGGGGGVRLKMKLPRAQVEKLVREAKDEAEAAHKIMSLCMQKEAESNTKTRERRVSFMPISKEISEIAVAS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1213 204 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 184 - -
Lele49g1213 204 Coils Coil 148 168 - -
Lele49g1213 204 Pfam PADRE domain 1 178 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1213 Lele-ChrLele49 8111548 8113253 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g1213 49 8111548 8113253 Lele49g1213 49 8111548 8113253 ECH
Lele49g1213 49 8111548 8113253 Lele25g1265 25 8514876 8516451 ECH
Lele49g1213 49 8111548 8113253 Lele26g1278 26 8432210 8433907 ECH
Lele49g1213 49 8111548 8113253 Lele27g0818 27 16226922 16228502 ECH
Lele49g1213 49 8111548 8113253 Lele28g1270 28 8478871 8480400 ECH
Lele49g1213 49 8111548 8113253 Lele51g1232 51 8137345 8137953 hybridization
Lele49g1213 49 8111548 8113253 Lele52g1579 52 19666558 19668171 hybridization