Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1278 ATGGGTAACGCCGTTGGACGAAGTAGGAAAGCGAAGGTGATGAAAGTAGATGGAGAGACGTTCAAGTTTAAGACGCCGGTGAGGGTGGATGACGTCGTTAAGGACCATCCGGGTCATGTGTTGTTGGATTCGGAGGCGGTTAAGCATTCCGGAGTTCGGGCTAAACCGTTGGAGCCTTACCAGGAGTTAAAGCCTAAGAGAATCTACTTCCTCGTGGAGCTTCCTAAGGTTCAGCCGCCGCCGGTGGAGCCTCAGCTACACAGGAGGGTCCGATCCAGTGGGATTCGGGGAATGAATGCTAGGGATAGGCTCGACTTCTTGATGCTTTCTAAGCGATCGGTCTCGGATATCACGTTCGCAAACAACAAGCAGCAGCCGGTCGCCGGCCGATTGGATGGTCTCGGGCCCGCGCCTGACGACGAGCCCTTGAGAGTCAAAATGAGGCTTCCTAAGGCCCAGCTGGAGAAGCTCATGGAGGAGAGCCAAGACGGAGCTCAGGTCGCCGAAAAGATAATCAAATTGTATATGGCCAATAATGCCGCCGAGGCTGGTGGCGTCGCCGGCGAAGCCAAGGCTGAGCTCGGTGCCATAAAAGAGGCTCAAAAGCCACGAGGGAAACGAGTGAGTTTCAGTCCAATGGAAGAAGAAGGAGAAATATGCGTAGCAGCAGCTTCTCAATAG 681 0.5419 MGNAVGRSRKAKVMKVDGETFKFKTPVRVDDVVKDHPGHVLLDSEAVKHSGVRAKPLEPYQELKPKRIYFLVELPKVQPPPVEPQLHRRVRSSGIRGMNARDRLDFLMLSKRSVSDITFANNKQQPVAGRLDGLGPAPDDEPLRVKMRLPKAQLEKLMEESQDGAQVAEKIIKLYMANNAAEAGGVAGEAKAELGAIKEAQKPRGKRVSFSPMEEEGEICVAAASQ 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1278 226 Pfam PADRE domain 1 199 IPR025322 -
Lele26g1278 226 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1278 Lele-ChrLele26 8432210 8433907 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1265 25 8514876 8516451 Lele26g1278 26 8432210 8433907 CCT
Lele26g1278 26 8432210 8433907 Lele25g1273 25 8585625 8586050 CCT
Lele26g1278 26 8432210 8433907 Lele27g0811 27 16165524 16165949 CCT
Lele26g1278 26 8432210 8433907 Lele28g1277 28 8534908 8535333 CCT
Lele26g1278 26 8432210 8433907 Lele26g1278 26 8432210 8433907 ECH
Lele25g1265 25 8514876 8516451 Lele26g1278 26 8432210 8433907 ECH
Lele49g1213 49 8111548 8113253 Lele26g1278 26 8432210 8433907 ECH
Lele51g1232 51 8137345 8137953 Lele26g1278 26 8432210 8433907 ECH
Lele52g1579 52 19666558 19668171 Lele26g1278 26 8432210 8433907 ECH
Lele26g1278 26 8432210 8433907 Lele27g0818 27 16226922 16228502 hybridization
Lele26g1278 26 8432210 8433907 Lele28g1270 28 8478871 8480400 hybridization