Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0635 ATGGCTTCCCACAAGCTCTTTGCTATCATTTTCGTTCTCTCTCTCCTTGCTCACTCTACATTCACCGTTGCCCACAACAAACCAAAACCATGCCCGCCACCGACCCCACCGCCGACCCCGAAGCCGAGTCCTACACCCCCGACACCGGCGACGATGGACAAATGCCCGAAGGATACGCTGAAGCTGGCGTTGTGTGCGGATGTTCTGGGACTGGTTCATGTTGTTGTCGGAACTCCATTGTCGGAGAAGTGTTGTGCATTGTTGGATGGATTGGTGGATTTGGAGGCGGCACTTTGTCTGTGCACAGCAATTAAGGCCAACTTGCTTGGAATCAACTTGAATGTCCCAGTCACTCTCAGCGTAATCCTTAGTGCTTGTCAGAAAACAGTTCCTCCTGGTTTCCAATGCCCTTAG 414 0.5217 MASHKLFAIIFVLSLLAHSTFTVAHNKPKPCPPPTPPPTPKPSPTPPTPATMDKCPKDTLKLALCADVLGLVHVVVGTPLSEKCCALLDGLVDLEAALCLCTAIKANLLGINLNVPVTLSVILSACQKTVPPGFQCP 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0635 137 Gene3D - 53 137 IPR036312 -
Lele28g0635 137 SMART aai_6 55 136 IPR016140 -
Lele28g0635 137 CDD HPS_like 53 136 IPR027923 -
Lele28g0635 137 FunFam pEARLI1-like lipid transfer protein 1 53 137 - -
Lele28g0635 137 PANTHER - 7 136 - -
Lele28g0635 137 Pfam Hydrophobic seed protein 55 137 IPR027923 -
Lele28g0635 137 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 58 137 IPR036312 -
Lele28g0635 137 MobiDBLite consensus disorder prediction 27 51 - -
Lele28g0635 137 MobiDBLite consensus disorder prediction 27 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0635 Lele-ChrLele28 4053391 4053804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0635 43 137 Acyl Lipid Metabolism Gene Families AT4G22490 36.842 4.20e-17 70.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0637 25 4028780 4030682 Lele28g0635 28 4053391 4053804 hybridization
Lele26g0653 26 4146844 4147266 Lele28g0635 28 4053391 4053804 hybridization