Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0794 ATGAAGGATGACGCAGATGATCGAAAACGGGATGATCCATGGCCCTCGTCAAATTCGCCCTATCAGGGGGAACCCCAACATGATATGAAGCTTTGGGGAGTTTTTCTCTTCGGCTTGATTGGTGCCACTGCCACAACCTTCGCCGTTAGTCAGCTGCGGAGGACTGTTGATTGGTTCTATGCACAGATGTCCAGATCGCAATCATCATGGAAAGGAGGGACAGGCAATTCCTTTCGATCAGCTTTTCAGGAAGAAGCATGGAAAAGTTACAATAAGCGGCTCCAAGAAGAGTATGAAGAGGAAATGGCGAGGGTGGAACGTATAAGGCGTATGCAAAGTGTGTATAACAGGGAAAGGAATAAGTACAAAAGAAGCTATGAGAACTGGAGCCAAAACGGTCAAGGTGGTGCGTATCATCACCATTTCCAAAGAGATGATTGGTATTGGAAGACTGATGCATCCTACAGAGATTGGAGGACCAATTATCGAGAAGCTCCAAGGGAAACCGGAAGCTATTCATTATCGCATCACTACTCAGTTTTGGGTCTTGACAGGTTTAGAACGACATCATATACAGATGCAGAGATTAAGACAGCATTTAGGACAAAGGCAAAGGAGTATCATCCTGATCAGAACCAGGATAACAGAGAGTCTGCAGAGGCAAAATTCAAAGAGGTGGTGAATTCTTATGAAACCATAAAAAAGGAAAGAGGGAATCAGCTGTAA 726 0.4463 MKDDADDRKRDDPWPSSNSPYQGEPQHDMKLWGVFLFGLIGATATTFAVSQLRRTVDWFYAQMSRSQSSWKGGTGNSFRSAFQEEAWKSYNKRLQEEYEEEMARVERIRRMQSVYNRERNKYKRSYENWSQNGQGGAYHHHFQRDDWYWKTDASYRDWRTNYREAPRETGSYSLSHHYSVLGLDRFRTTSYTDAEIKTAFRTKAKEYHPDQNQDNRESAEAKFKEVVNSYETIKKERGNQL 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0794 241 Gene3D DnaJ domain 170 240 IPR036869 -
Lele25g0794 241 PRINTS DnaJ domain signature 200 215 IPR001623 -
Lele25g0794 241 PRINTS DnaJ domain signature 178 196 IPR001623 -
Lele25g0794 241 PRINTS DnaJ domain signature 218 238 IPR001623 -
Lele25g0794 241 SUPERFAMILY Chaperone J-domain 172 235 IPR036869 -
Lele25g0794 241 Pfam DnaJ domain 177 236 IPR001623 -
Lele25g0794 241 SMART dnaj_3 175 238 IPR001623 -
Lele25g0794 241 ProSiteProfiles dnaJ domain profile. 176 241 IPR001623 -
Lele25g0794 241 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 240 - -
Lele25g0794 241 Coils Coil 91 111 - -
Lele25g0794 241 MobiDBLite consensus disorder prediction 1 25 - -
Lele25g0794 241 Coils Coil 216 236 - -
Lele25g0794 241 CDD DnaJ 177 234 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0794 Lele-ChrLele25 5072601 5075545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0794 177 233 Miscellaneous Gene Families AT5G49580 43.860 4.19e-06 45.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0798 01 4630648 4632787 Lele25g0794 25 5072601 5075545 CCT
Lele02g0770 02 4698029 4700016 Lele25g0794 25 5072601 5075545 CCT
Lele03g0791 03 4629337 4631468 Lele25g0794 25 5072601 5075545 CCT
Lele04g0788 04 4831504 4833636 Lele25g0794 25 5072601 5075545 CCT
Lele25g0794 25 5072601 5075545 Lele27g1282 27 19597377 19600345 hybridization
Lele25g0794 25 5072601 5075545 Lele28g0793 28 5065075 5068729 hybridization