Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1282 ATGAAGGATGACGCAGATGATCGAAAACGGGATAATCCATGGCCCTCATCAAATTCGCCCTATCAGGGGGAGCCCGAACATGATATGAAGCTTTGGGGAGTTTTTCTCTTCGGCTTGATTGGTGCCACTGCCACAACCTTCGCCGTGAGTTATTTGCTTTTATTTTCGTCAATTGATTCTAAGTGTTCAGCAAATCCCAGCCATATTAGCAGTGACGTTCCCAAGTGTAGGTGGTTTGAATTATTCGAAACAAGTGCACGTCTTAAGCCTCCGGTTGGCTATGAAAACTCGCACTTCATCGCATGGCAATATAGCTTATTGCGGGTTAGTCAGCTGCGGAGGACTGTTGATTGGTTCTATGCACAAATGTCCAGATCGCAATCATCATGGAAAGGAGGGACAGGCAATTCCTTTCGATCAGCTTTTCAGGAAGAAGCATGGAAAAGGTACAATAAGCGGCTCCAAGAAGAGTATGAAGAGGAAATGGCTAGGGTGGAACGTATAAGGCGTATGCAAAGTGTGTATAACAGGGAAAGGAATAAGTACAAAAGCAGCTATGAGAACTGGAGCCAAAATGGTCAGGGTGGTGCATATCATCACCATTTCCAAAGAGATGATTGGTATTGGAAGACTGATGCATCATCCTATAGAGATTGGAGGACCAATTATCGAGATGCTCCAAGGGAAACCGGAAGCTATTCATTATCGCATCACTACTCAGTTTTGGGTCTTGACAGGTTTAGAACGACACCATATACAGATGCAGAGATTAAGACAGCATTTAGGACAAAGGCAAAGGAGTATCATCCTGATCAGAACCAGGATAATAGAGAGGCTGCAGAGGCAAAATTCAAAGAGGTGGTGAATTCTTATGAAACCATAAAAAAGGAAAGAGGGAATCAGCTGTAA 909 0.4378 MKDDADDRKRDNPWPSSNSPYQGEPEHDMKLWGVFLFGLIGATATTFAVSYLLLFSSIDSKCSANPSHISSDVPKCRWFELFETSARLKPPVGYENSHFIAWQYSLLRVSQLRRTVDWFYAQMSRSQSSWKGGTGNSFRSAFQEEAWKRYNKRLQEEYEEEMARVERIRRMQSVYNRERNKYKSSYENWSQNGQGGAYHHHFQRDDWYWKTDASSYRDWRTNYRDAPRETGSYSLSHHYSVLGLDRFRTTPYTDAEIKTAFRTKAKEYHPDQNQDNREAAEAKFKEVVNSYETIKKERGNQL 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1282 302 PRINTS DnaJ domain signature 261 276 IPR001623 -
Lele27g1282 302 PRINTS DnaJ domain signature 279 299 IPR001623 -
Lele27g1282 302 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 53 - -
Lele27g1282 302 SUPERFAMILY Chaperone J-domain 236 297 IPR036869 -
Lele27g1282 302 SMART dnaj_3 236 299 IPR001623 -
Lele27g1282 302 Coils Coil 151 171 - -
Lele27g1282 302 ProSiteProfiles dnaJ domain profile. 237 302 IPR001623 -
Lele27g1282 302 Coils Coil 277 297 - -
Lele27g1282 302 Gene3D DnaJ domain 232 301 IPR036869 -
Lele27g1282 302 CDD DnaJ 238 295 IPR001623 -
Lele27g1282 302 MobiDBLite consensus disorder prediction 1 23 - -
Lele27g1282 302 Pfam DnaJ domain 238 297 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1282 Lele-ChrLele27 19597377 19600345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1282 238 294 Miscellaneous Gene Families AT5G49580 45.614 3.07e-06 46.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0798 01 4630648 4632787 Lele27g1282 27 19597377 19600345 CCT
Lele02g0770 02 4698029 4700016 Lele27g1282 27 19597377 19600345 CCT
Lele03g0791 03 4629337 4631468 Lele27g1282 27 19597377 19600345 CCT
Lele04g0788 04 4831504 4833636 Lele27g1282 27 19597377 19600345 CCT
Lele25g0794 25 5072601 5075545 Lele27g1282 27 19597377 19600345 hybridization
Lele26g0806 26 5129570 5133490 Lele27g1282 27 19597377 19600345 hybridization