Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0798 ATGGAAATGGAAATGTCGTGGCTGACTCGCTCTCTCGCTAACTCCCTCCGACTCGATGAGGCCGTCGGCGACGTTGATGATAAATGCGACGTCGTACCCAATTATCCCTGCGACCCTCCTCCTACTTCACCTAAAAATCACGAACCTCATCACCTGCAACAACAACCACCGCAAGACAATGAGTTTGGATTAGAAGATGAAGCGCATGCTCGAGGAGTCCAAGAGGATCTTCATGTATTCAAGCAAACTCTGACCCGTCAATTCTGGGGAATGGCATCTTTCTTAGCTCCTCCACCGCTAGATTCCCACCCTTCCTTTCCCTCTCATCGCCACACGCAATCTTTTCCCGCTGCATCCACTCGTAATAGATCAGAGCCCTCCGATTACTGTGTTTCTGAGAATGCTGAAGAATCAGAGGCTCGGCGGATTCGGAGAGGCTTTTCCCACATCGAAGAAGCAAATTTCCACCGGGATGCCCCTGAAACTTTCGATAAAAATCCGAATTTGATTTCGTTAGGATCCGAGTCTCTACGAAACGAGGAATCCGAAATGGAGGAGTATGATTTTGAACGCGTGGTTGGAATTACGGATGAGGTATTGGCCTTCGCGAGAAATATCGCTATGCATCCCGAGACGTGGTTGGATTACCCTGTCGACGAAGAAGATGACACGGATGATTTTGACATGTCCGATGCCCAACAAGAGCATGCTTTGGCCATTGAAAGACTTGATCCTAGATTAGCTGCGCTCAGAATTGAGCTGTGCCCTTGCCATATGAGTGAAAGTTACTTTTGGAAAGTCTATTTTGTACTATTGCATTCCAGGCTTAATAAACAAGATGCTGAGGTTTTATCTACACCTCAGGTTTTGGCGGCCAGAGCACTGTGGATGGAGGAGTTACATAAGCAAGAGAAACTGGAATCTGAATGTTTTGGAAGGAGCATTTCCTACTCAAGAGACACAGCTCCACATGAAGACTTTTCTCCCAGATTTTTCGATAATGCCAATTCTGGTGTCACGCCTCAAGTAACATACAGATTTGAGGATGATTATGAGAGTGAGAAGCACATGGGTGATAGCTCTGAAGCACATGTCATCCATAAGGCAGTCATCGAGGAAAACTCAAAAACTAAAACTGAGGACAAGGACCTATCAAGGATCCGATCCTCTAAATTTGTTCTCGAGGACTATGAAGACGATGAGTATGAATGGCCAGAGGACGAAATTGATGGAATTACGGTGCCCGAGGTAAATGAAGAAGAAATATCTTTTAGTGATCTCGAGGATGATAATTATTCGTTGAAACCTTTTAAATCCAAAACAGAATCAAATGCTCCATGA 1341 0.4526 MEMEMSWLTRSLANSLRLDEAVGDVDDKCDVVPNYPCDPPPTSPKNHEPHHLQQQPPQDNEFGLEDEAHARGVQEDLHVFKQTLTRQFWGMASFLAPPPLDSHPSFPSHRHTQSFPAASTRNRSEPSDYCVSENAEESEARRIRRGFSHIEEANFHRDAPETFDKNPNLISLGSESLRNEESEMEEYDFERVVGITDEVLAFARNIAMHPETWLDYPVDEEDDTDDFDMSDAQQEHALAIERLDPRLAALRIELCPCHMSESYFWKVYFVLLHSRLNKQDAEVLSTPQVLAARALWMEELHKQEKLESECFGRSISYSRDTAPHEDFSPRFFDNANSGVTPQVTYRFEDDYESEKHMGDSSEAHVIHKAVIEENSKTKTEDKDLSRIRSSKFVLEDYEDDEYEWPEDEIDGITVPEVNEEEISFSDLEDDNYSLKPFKSKTESNAP 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0798 446 ProSiteProfiles BSD domain profile. 224 276 IPR005607 -
Lele01g0798 446 MobiDBLite consensus disorder prediction 423 446 - -
Lele01g0798 446 MobiDBLite consensus disorder prediction 102 135 - -
Lele01g0798 446 MobiDBLite consensus disorder prediction 32 62 - -
Lele01g0798 446 SUPERFAMILY BSD domain-like 194 281 IPR035925 -
Lele01g0798 446 SMART wurzfinal6 224 276 IPR005607 -
Lele01g0798 446 MobiDBLite consensus disorder prediction 106 131 - -
Lele01g0798 446 Pfam BSD domain 224 280 IPR005607 -
Lele01g0798 446 Gene3D BSD domain 193 286 IPR035925 -
Lele01g0798 446 PANTHER BSD DOMAIN-CONTAINING PROTEIN 5 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0798 Lele-ChrLele01 4630648 4632787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0798 194 274 EF-hand Containing Proteins AT1G69030 30.769 3.82e-07 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0798 01 4630648 4632787 Lele25g0794 25 5072601 5075545 CCT
Lele01g0798 01 4630648 4632787 Lele26g0806 26 5129570 5133490 CCT
Lele01g0798 01 4630648 4632787 Lele27g1282 27 19597377 19600345 CCT
Lele01g0798 01 4630648 4632787 Lele28g0793 28 5065075 5068729 CCT
Lele01g0798 01 4630648 4632787 Lele01g0798 01 4630648 4632787 ECH
Lele01g0798 01 4630648 4632787 Lele03g0791 03 4629337 4631468 hybridization
Lele01g0798 01 4630648 4632787 Lele04g0788 04 4831504 4833636 hybridization