Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0770 ATGCAACAACAACAACAACCGCAAGACAATGAGTTTGGATTAGAAAATGAAGCGCATGCTCGAGGAGTCCAAGAGGATCTTCACGTATTCAAGCAAACTCTGACCCGTCAATTCTGGGGAATGGCGTCCTTCTTAGCTCCTCCCCCGCTAAATTCCCACCCTTCCTCTCCCTCTTATCGCCATACGCAATCTTTTCCCGCCGCATCCACTCGTAATCGATCAGAGTCTTCCGATCACTGTGTTTACCAGAAAGATGAAGAATCAGAGGCGCCACAGATTCGGAGAGGCTTTTCTCACATCATAGAAGCAAGTTTCCTCCGGGAGGCCCCTGAAACTCTGGGCACAAATCCATATTCGATTTCGTTTCAATCCGAGCCTCTACGAAACGAGGAATCCGCAATGGAGGAGTATGATTTTGAAAGCGTGGTTGGAATTACGGATGAGGTGTTGTCCTTCGCTAGCAATATCGGGATGCATCCCGAGACGTGGTTGGATTACCCTGTAGACGAAGAAGATGACCCGGATGTGATGAAATTGGCTGTCTGCCCACAATTAATTCTGCATATATACTTACTCGTAGATTTTGACATGTCCGATGCCCAACAAGAGCATGCTATGGCCATTGAAAGACTTGATCCTAGATTAGCTGCGCTCAGAATTGAGCTGTGCCCTTGCCATATGAGTGAAAGTTACTTTTGGAAAGTCTATTTTGTACTTTTGCATTCCAGGCTTAATAAACAAGATGCTGAGGTTTTATCTACACCTCAGGTTTTGGCGGCCAGAGCACTGTGGATGGAGGAGTTACATAAGCAAGAGAAACTGGAATCTGACTGTTTTGGAAGGAGCATTTCCTACTCAAGAGACACAGCTCCGCATGAAGACTCCTCTCCAAGATTTTTCGAAAATGCCTATTCTGGTGCCATGCCTCATGGAACGTACAGATTTGAGGATGATTATGAGAGTGAGAAGCACATGGGCGAAAGCTCTGAAGCACATTTCATCGATAAGGCGGTCATCGAGGAAAACTCAAAAACTAAAACTGAGGACAAGGACCTATCCAGGATTCGATCCTCTAAATTTGTTCTCGAGGACTATGAAGACGATGAGTATGGATGGCCAGAGGACGATATTGATGGAATTGTGGTGCCCGATGTAAATGAAGAAGACATATCTTTTAGTGACCTCGAGGATGATAATTATTCGTTGAAACCTTTTAAATCCAAAACAGAATCAAATGCTCCATGA 1245 0.449 MQQQQQPQDNEFGLENEAHARGVQEDLHVFKQTLTRQFWGMASFLAPPPLNSHPSSPSYRHTQSFPAASTRNRSESSDHCVYQKDEESEAPQIRRGFSHIIEASFLREAPETLGTNPYSISFQSEPLRNEESAMEEYDFESVVGITDEVLSFASNIGMHPETWLDYPVDEEDDPDVMKLAVCPQLILHIYLLVDFDMSDAQQEHAMAIERLDPRLAALRIELCPCHMSESYFWKVYFVLLHSRLNKQDAEVLSTPQVLAARALWMEELHKQEKLESDCFGRSISYSRDTAPHEDSSPRFFENAYSGAMPHGTYRFEDDYESEKHMGESSEAHFIDKAVIEENSKTKTEDKDLSRIRSSKFVLEDYEDDEYGWPEDDIDGIVVPDVNEEDISFSDLEDDNYSLKPFKSKTESNAP 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0770 414 Pfam BSD domain 194 248 IPR005607 -
Lele02g0770 414 MobiDBLite consensus disorder prediction 52 89 - -
Lele02g0770 414 SUPERFAMILY BSD domain-like 144 249 IPR035925 -
Lele02g0770 414 MobiDBLite consensus disorder prediction 388 414 - -
Lele02g0770 414 MobiDBLite consensus disorder prediction 55 76 - -
Lele02g0770 414 PANTHER BSD DOMAIN-CONTAINING PROTEIN 16 400 - -
Lele02g0770 414 ProSiteProfiles BSD domain profile. 192 244 IPR005607 -
Lele02g0770 414 SMART wurzfinal6 192 244 IPR005607 -
Lele02g0770 414 Gene3D BSD domain 145 254 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0770 Lele-ChrLele02 4698029 4700016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0770 144 242 EF-hand Containing Proteins AT1G69030 28.283 3.95e-07 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0770 02 4698029 4700016 Lele25g0794 25 5072601 5075545 CCT
Lele02g0770 02 4698029 4700016 Lele26g0806 26 5129570 5133490 CCT
Lele02g0770 02 4698029 4700016 Lele27g1282 27 19597377 19600345 CCT
Lele02g0770 02 4698029 4700016 Lele28g0793 28 5065075 5068729 CCT
Lele02g0770 02 4698029 4700016 Lele02g0770 02 4698029 4700016 ECH
Lele02g0770 02 4698029 4700016 Lele03g0791 03 4629337 4631468 hybridization
Lele02g0770 02 4698029 4700016 Lele04g0788 04 4831504 4833636 hybridization