Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0791 ATGGAAATGTCGGGGCTGACTCTCCCTCTCGCTAACTCCCTCCGACTCGATGAGGCCGTCGGCGACGATGATGATGAATGCGACGTCGTACCCAATCATCCATGCGACCCTCCTCCTACTTCACCTAAAAATCACGAACCTCATCACCTGCAACAACAACCACCGCAAGACAATGAGTTTGGATTAGAAGATGAAGCGCATGCTCGAGGAGTCCAAGAGGATCTTCATGTATTCAAGCAAACTCTGACCCGTCAATTCTGGGGAATGGCATCTTTCTTAGCTCCTCCCCCGCTAGATTCCCACCCTTCCTTTCCCTCTCATCGCCACACGCAATCTTTTCCCGCTGCATCCACTCGTAATCTATCAGAGCCCTCCGATTACTGTGTTTCTGAGAATGCTGAAGAATCAGAGGCTGGACGGATTCGGAGAGACTTTTCCCACGTCGAAGAAGCAAGTTTCCACCGGGATGCCCCTGGAACTTTCGATAAAAATCCGAATTTGATTTCATTTGGATCCGAGTCTCTACGAAACGAGGAATCCGAAATGGAGGAGTATGATTTTGAACGCGTGGTTGGAATTACGGATGAGGTATTGGCCTTCGCGAGAAATATCGCGATGCATCCCGAGACGTGGTTGGATTACCCTGTCGACGAAGAAGATGACACGGATGATTTTGACATGTACGATGCCCAACAAGAGCATGCTATGGCCATTGAAAGACTTGATCCTAGATTAGCTGCGCTCAGAATTGAGCTGTGCCCTTGCCATATGAGTGAAAGTTACTTTTGGAAAGTCTATTTTGTACTTTTGCATTCCAGGCTTAATAAACAAGATGCTGAGGTTTTATCTACACCTCAGGTTTTGGCGGCCAGAGCACTGTGGATGGAGGAGTTACATAAGCAAGAGAAACTGGAATCTGAATGTTTTGGAAGGAGCATTTCCTACTCAAGAGACACAGCTCCGCATGAAGACTTTTCTCCCAGATTTTTCGATAATGCCAATTCTGTTGTCATGCCTCATGGAACATACAGATTTGAGGACGATTATGAGAGTGAGAAGCACATGGGTGATAGCTCTGAAGCACATGTCATCCATAAGGCAGTCATCGAGGAAAACTCAAAAACTAAAACTGAGGACAAGGACCTATCAAGGATCCGATCCTGTAAATTTGTTCTCGAGGACTATGAAGACGATGAGTATGAATGGCCAGAGGACGATATTGATGGAATTACGGTGCCCGAGGTAAATGAAGAAGACATATCTTTTAGTGATCTCGAGGATGATAATTATTCGTTGAAACCTTTTAAATCCAAAACAGAATCAAATGCTCCATGA 1335 0.4569 MEMSGLTLPLANSLRLDEAVGDDDDECDVVPNHPCDPPPTSPKNHEPHHLQQQPPQDNEFGLEDEAHARGVQEDLHVFKQTLTRQFWGMASFLAPPPLDSHPSFPSHRHTQSFPAASTRNLSEPSDYCVSENAEESEAGRIRRDFSHVEEASFHRDAPGTFDKNPNLISFGSESLRNEESEMEEYDFERVVGITDEVLAFARNIAMHPETWLDYPVDEEDDTDDFDMYDAQQEHAMAIERLDPRLAALRIELCPCHMSESYFWKVYFVLLHSRLNKQDAEVLSTPQVLAARALWMEELHKQEKLESECFGRSISYSRDTAPHEDFSPRFFDNANSVVMPHGTYRFEDDYESEKHMGDSSEAHVIHKAVIEENSKTKTEDKDLSRIRSCKFVLEDYEDDEYEWPEDDIDGITVPEVNEEDISFSDLEDDNYSLKPFKSKTESNAP 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0791 444 MobiDBLite consensus disorder prediction 415 444 - -
Lele03g0791 444 MobiDBLite consensus disorder prediction 17 60 - -
Lele03g0791 444 ProSiteProfiles BSD domain profile. 222 274 IPR005607 -
Lele03g0791 444 SMART wurzfinal6 222 274 IPR005607 -
Lele03g0791 444 Gene3D BSD domain 191 284 IPR035925 -
Lele03g0791 444 MobiDBLite consensus disorder prediction 104 129 - -
Lele03g0791 444 Pfam BSD domain 222 278 IPR005607 -
Lele03g0791 444 MobiDBLite consensus disorder prediction 100 142 - -
Lele03g0791 444 PANTHER BSD DOMAIN-CONTAINING PROTEIN 3 430 - -
Lele03g0791 444 SUPERFAMILY BSD domain-like 192 279 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0791 Lele-ChrLele03 4629337 4631468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0791 192 272 EF-hand Containing Proteins AT1G69030 29.670 1.17e-06 48.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0791 03 4629337 4631468 Lele25g0794 25 5072601 5075545 CCT
Lele03g0791 03 4629337 4631468 Lele26g0806 26 5129570 5133490 CCT
Lele03g0791 03 4629337 4631468 Lele27g1282 27 19597377 19600345 CCT
Lele03g0791 03 4629337 4631468 Lele28g0793 28 5065075 5068729 CCT
Lele03g0791 03 4629337 4631468 Lele03g0791 03 4629337 4631468 ECH
Lele01g0798 01 4630648 4632787 Lele03g0791 03 4629337 4631468 hybridization
Lele02g0770 02 4698029 4700016 Lele03g0791 03 4629337 4631468 hybridization