Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0662 ATGCGTTTCTTTTCTTCACTATGTAGTCAATCGTCATACGATAGTTATGAATTGATCCTCCTTCGTCACAGAATGTCGAAGCTTCTTCTCCACAGCTCTCATCTCAGCTCCGTTCACCGATGCATCACCTTTCTTTCCCTTCCCTTCTCTACCTCCATTGCCTCCGTTTCTCTCCTCCATTTTCGAAGCCGCTTCTCCGTTTCCATTTCTTCTCAATCGCACCTTCAAAGTATCTGCCCCTTTCAGTCCCGTAGGCACCTATCAGTTTGTGCTTTCGATTCTTCATCATCAGAGACTAAAGACGAGGAAGAAGCTGTCGGAAAGGATGGAATCGATAATCAATTTGTTAAAAATGCTGATGAGGATTATCCGACCGGGGAATTTGAATTTGAACCCATTACGGGGTGGAGAGGATTTCTAGTGAAGCTTAAGATGCTGGTTGCCTTCCCTTGGGAGCGTGTTCGCAAGGGCAGCGTCCTCAAAATGAAGTTCCGCGGCCAGATATCCGATCAAATAAAGAGTAGATTCTCTCGGGGATTATCTCTACCTCAGATTTGTGAGAACTTTCTGAAATCAGCATATGATCCTCGTATTTCTGGTGTCTATCTCCATATTGATATTTTGAGTTGTGGAAAATTTGTTGTGGCTTATGTCCCTTCATGTCAGGAAAAAGAATACTACCTTGCTTGTGCTTGTGACGAGATATACGCCCCTCCAAGTGCCTATTTTTCTTTGTTTGGCTTGACTGTTCAAGCTTCATTCCTCAGGGGTAATTGCCTCAAGACTGTCCCTGATTCAGGTGTTTTAGATAACATAGGAATTGAACCACAAGTGGAAAGGATTGGCAAATACAAAAGCTCTGGGGATCAACTGGCCCGCAGAACCATATCCGAGGCAAACAGTGAGATGCCGACTGCATTGCTTGATAATATCTACACAAATTGGCTGGATAAAGTTTCCTCTGCAAAAGGAAAAAAAAGAGAAGATATTGAGAACTTTATAAATGAAAGAGTCTATCAAGTAGACAAGCTGAAAGAAGAGGGCTTCATAACTAACATAATCTATGATGACGAGGTTATTTCCATGTTGAAAGAGAGACTTGGAGTGGCTACAGATAAAGATCTTCCTATGGTGGATTACAGAAAGTATTCCAAAGTTAGGAAATGGACCGTTGGAATATCAGGTGGTAAAGACTTGATAGCTCTCATCCGAGCCTCAGGGAGTATTAGCCGTATTGAGGGTCCATTAAGTGTGTCAGGCTCAGGGATCGCTGGGGAGAAGTTTATTGAGAAGATTCGCAGTAGTCCAAAAAATATAAGGCTGCTATTATCCGAATTGACAGTCCTGGAGGTGATGCTCTTGCGTCTGATCTGTAAGTGCTGGATGTGGAGAGAAATCAGACTTTTGGCTGCTTCAAAACCGGTCATTGCTTCAATGTCTGATGTGGCAGCAAGTGGAGGATATTATATGGCAATGGCAGCAGGAACTATTGTTGCTGAAAGCCTTACTTTAACTGGTTCAGTCGGAGTGGTTACAGGAAAACTCAACCTGGGTAAACTGTACGAGAAGATTGGATTTAAAAAAGAAATCATATCAAGGGGAAGATATGCTGAGCTACTTGCGGCAGAACAACGTCCTTTTAGACCGGATGAAGCCGAGTTATTTGCCAAGTCTGCACAGAATGCCTACAAGCAATTTTGA 1701 0.4297 MRFFSSLCSQSSYDSYELILLRHRMSKLLLHSSHLSSVHRCITFLSLPFSTSIASVSLLHFRSRFSVSISSQSHLQSICPFQSRRHLSVCAFDSSSSETKDEEEAVGKDGIDNQFVKNADEDYPTGEFEFEPITGWRGFLVKLKMLVAFPWERVRKGSVLKMKFRGQISDQIKSRFSRGLSLPQICENFLKSAYDPRISGVYLHIDILSCGKFVVAYVPSCQEKEYYLACACDEIYAPPSAYFSLFGLTVQASFLRGNCLKTVPDSGVLDNIGIEPQVERIGKYKSSGDQLARRTISEANSEMPTALLDNIYTNWLDKVSSAKGKKREDIENFINERVYQVDKLKEEGFITNIIYDDEVISMLKERLGVATDKDLPMVDYRKYSKVRKWTVGISGGKDLIALIRASGSISRIEGPLSVSGSGIAGEKFIEKIRSSPKNIRLLLSELTVLEVMLLRLICKCWMWREIRLLAASKPVIASMSDVAASGGYYMAMAAGTIVAESLTLTGSVGVVTGKLNLGKLYEKIGFKKEIISRGRYAELLAAEQRPFRPDEAELFAKSAQNAYKQF 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0662 566 CDD S49_SppA_67K_type 160 365 - -
Lele18g0662 566 PANTHER PROTEASE 4 117 434 - -
Lele18g0662 566 Pfam Peptidase family S49 211 369 IPR002142 GO:0006508|GO:0008233
Lele18g0662 566 Pfam Peptidase family S49 469 566 IPR002142 GO:0006508|GO:0008233
Lele18g0662 566 Gene3D - 395 545 - -
Lele18g0662 566 SUPERFAMILY ClpP/crotonase 464 558 IPR029045 -
Lele18g0662 566 CDD S49_Sppa_N_C 400 566 IPR002142 GO:0006508|GO:0008233
Lele18g0662 566 Gene3D - 152 253 - -
Lele18g0662 566 SUPERFAMILY ClpP/crotonase 149 358 IPR029045 -
Lele18g0662 566 Gene3D - 260 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0662 Lele-ChrLele18 3978157 3983153 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1990 21 26839569 26844660 Lele18g0662 18 3978157 3983153 CCT
Lele22g1957 22 24217579 24224227 Lele18g0662 18 3978157 3983153 CCT
Lele23g0022 23 124970 130920 Lele18g0662 18 3978157 3983153 CCT
Lele24g1909 24 23796691 23800198 Lele18g0662 18 3978157 3983153 CCT
Lele18g0662 18 3978157 3983153 Lele19g0701 19 4062314 4067744 hybridization
Lele18g0662 18 3978157 3983153 Lele20g0755 20 14508531 14513805 hybridization