Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1990 ATGGAGCTCAACGGCACGCCGGCTTCTCTTGGCTTTCATATGCCTGCAGATTGGGAACCCCACTCACACTGTTGGATTGGTGGGCCTGAAAGCCCAGATAATTGGAGAGACAATGCTGTTCCCTCCCAACATGTATTTGCCAGGGTAGCATCTGCGATCGCGAAGTTTGAGCCTGTGACTGCTTGTGCAAGTTCTGCCCAGAATGCGCGAAGTTTGCTGCCTTCAAATATCAGGGTCGCTGAGATGAGCTTCAATGATTCATGGTTTCGTGACACTGGGCCCACTTTTGTTGTGAGCAGAAATCCCTCAAAGTCTGATACAGAGCCGAAGGTCGCAAGAATTGATTGGGATTTTAACAGCTGGGGTGGTTTAGATGGCGGTTGTTACAGTGACTTGAGTCTTGACCTCCTAGTTGCAAAGAACATTCTGGAAATTGAAACAATTCCTAGATTTCCCCAAACAATTGTGCTTGAAGGTGGAAGCATCCATGTAGATGGAGAAGGGACTTGTCTTACAACCGAGGAATGTCTCTTGAACAAAAACAGGAATCCAAGATTGAGTAAAATCCAGATAGAGGATGAACTCAAAGCATATCTGGGAGTCAGAAAGATTATATGGTTGCCTCGTGGACTGTATAGGGATGATGATACTAATGGTCATAACGACAACATGTGCTGTTTTGCAAGGCCTGGTGTGGTTCTTCTGTCTTGGACTGATGATGAAACTGATCCGCAGTATGAAAGATCTGTAGAGGCATATTCTTTGCTTTCAAGTGTAACTGATGCCAATGGCAGAAAACTTGAAATAATTAAAATCCATGTACCTGGCCCACTCTATAGACAGAGGAAGAGGCTGCTGGGCCCATTCAGGCAAGATGGCGATGGCAAACCCAGACTTCCAGGTACAAGACTTGCTGCTACTTATGTAAACTTCTATATTGCAAACGGAGCTGTCATCGTTCCACAGTTTGGAACGAAGAAGCTCTGCAAGTCCTATCTAAGGCCTTTCCTCATCGCAAAGTAA 1023 0.4555 MELNGTPASLGFHMPADWEPHSHCWIGGPESPDNWRDNAVPSQHVFARVASAIAKFEPVTACASSAQNARSLLPSNIRVAEMSFNDSWFRDTGPTFVVSRNPSKSDTEPKVARIDWDFNSWGGLDGGCYSDLSLDLLVAKNILEIETIPRFPQTIVLEGGSIHVDGEGTCLTTEECLLNKNRNPRLSKIQIEDELKAYLGVRKIIWLPRGLYRDDDTNGHNDNMCCFARPGVVLLSWTDDETDPQYERSVEAYSLLSSVTDANGRKLEIIKIHVPGPLYRQRKRLLGPFRQDGDGKPRLPGTRLAATYVNFYIANGAVIVPQFGTKKLCKSYLRPFLIAK 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1990 340 Pfam Porphyromonas-type peptidyl-arginine deiminase 13 326 IPR007466 GO:0004668|GO:0009446
Lele21g1990 340 PANTHER AGMATINE DEIMINASE-RELATED 2 327 IPR007466 GO:0004668|GO:0009446
Lele21g1990 340 SUPERFAMILY Pentein 3 326 - -
Lele21g1990 340 Gene3D - 2 333 - -
Lele21g1990 340 TIGRFAM agmatine_aguA: agmatine deiminase 6 326 IPR017754 GO:0009446|GO:0047632
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1990 Lele-ChrLele21 26839569 26844660 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1990 21 26839569 26844660 Lele17g0864 17 19939496 19944952 CCT
Lele21g1990 21 26839569 26844660 Lele18g0662 18 3978157 3983153 CCT
Lele21g1990 21 26839569 26844660 Lele19g0701 19 4062314 4067744 CCT
Lele21g1990 21 26839569 26844660 Lele20g0755 20 14508531 14513805 CCT
Lele21g1990 21 26839569 26844660 Lele21g1990 21 26839569 26844660 ECH
Lele21g1990 21 26839569 26844660 Lele23g0022 23 124970 130920 hybridization
Lele21g1990 21 26839569 26844660 Lele24g1909 24 23796691 23800198 hybridization