Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0022 ATGGAGCTCAACGGCACGCCGGCTTCGCTTGGCTTTCATATGCCTGCAGAGTGGGAACCCCACTCACACTGTTGGATTGGTTGGCCTGAACGCTCAGATAATTGGAGAGACAATGCTGTTCCCTCCCAACATGTATTTGCCAGGGTAGCATCTGCTATCTCGAAGTTTGAGCCTGTGACTGTTTGTGCAAGTTCTGCCCAGTGGAAGAATGCGCGAAGTTTGCTGCCTTCAAATATCAGGGTCGCTGAGATGAGCTTCAATGATTCTTGGTTTCGTGACACTGGGCCCACTTTTGTTGTGAGCAGAAATCCCTCAAAGTCTGATACAGAGCCTAAGGTCGCAGGAATTGATTGGGATTTTAACAGCTGGGGAGGTTTAGATGGCGGTTGTTACAGTGACTGGAGTCTTGACGTCCTAGTTGCAAAGAAGATTCTGGAAATTGAGACGATTCCTAGATTTCCCCAAACAATTGTGCTTGAAGGTGGAAGCATCCATGTAGATGGAGAAGGGACTTGTCTTACAACCGAGGAATGTCTCTTGAACAAAAACAGGAATCCAAGCTTGAGTAAAATCCAGATAGAGGATGAACTCAAAGCATATCTGGGAGTCAGAAAGATTATATGGTTGCCTCGTGGACTGTATGGGGATGATGATACTAATGGTCATATCGACAACATGTGCTGTTTTGCAAGGCCTGGTGTGGTTCTTCTGTCTTGGACTGATGATGAAACTGATCCGCAGTATGAAAGATCTGTAGAGGCATATTCTTTGCTTTCAAGTGTAACCGATGCCAATGGCAGAAAACTTGAAATAATTAAAATCCATGTACCTGGCCCACTCTATATGACAGAGGAAGAGGCTGCTGGGCTCATTCAGGATGGCGATGGCAAACCCAGACTTCCAGGTACAAGACTTGCTGCTACTTATGTAAACTTCTATATTGCAAACGGAGCTGTCATTGTTCCACAGTTTGGAGATAAAAAGAGGGACGAAGAAGCTCTGCAAGTCCTATCTAAGGCCTTTCCTCATCGCAAAGTTGTGGGAATCGAAGGTGCAAGGGAGATTGTTTTGGGGGGTGGAAATATACACTGCATTACTCAGCAGCAACCAGTCATCAAGACGGCAGTTTGA 1131 0.4589 MELNGTPASLGFHMPAEWEPHSHCWIGWPERSDNWRDNAVPSQHVFARVASAISKFEPVTVCASSAQWKNARSLLPSNIRVAEMSFNDSWFRDTGPTFVVSRNPSKSDTEPKVAGIDWDFNSWGGLDGGCYSDWSLDVLVAKKILEIETIPRFPQTIVLEGGSIHVDGEGTCLTTEECLLNKNRNPSLSKIQIEDELKAYLGVRKIIWLPRGLYGDDDTNGHIDNMCCFARPGVVLLSWTDDETDPQYERSVEAYSLLSSVTDANGRKLEIIKIHVPGPLYMTEEEAAGLIQDGDGKPRLPGTRLAATYVNFYIANGAVIVPQFGDKKRDEEALQVLSKAFPHRKVVGIEGAREIVLGGGNIHCITQQQPVIKTAV 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0022 376 Gene3D - 2 375 - -
Lele23g0022 376 PANTHER AGMATINE DEIMINASE-RELATED 2 371 IPR007466 GO:0004668|GO:0009446
Lele23g0022 376 Pfam Porphyromonas-type peptidyl-arginine deiminase 13 370 IPR007466 GO:0004668|GO:0009446
Lele23g0022 376 SUPERFAMILY Pentein 3 370 - -
Lele23g0022 376 TIGRFAM agmatine_aguA: agmatine deiminase 6 370 IPR017754 GO:0009446|GO:0047632
Lele23g0022 376 Hamap Agmatine deiminase [aguA]. 5 371 IPR017754 GO:0009446|GO:0047632
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0022 Lele-ChrLele23 124970 130920 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0022 23 124970 130920 Lele17g0864 17 19939496 19944952 CCT
Lele23g0022 23 124970 130920 Lele18g0662 18 3978157 3983153 CCT
Lele23g0022 23 124970 130920 Lele19g0701 19 4062314 4067744 CCT
Lele23g0022 23 124970 130920 Lele20g0755 20 14508531 14513805 CCT
Lele23g0022 23 124970 130920 Lele23g0022 23 124970 130920 ECH
Lele21g1990 21 26839569 26844660 Lele23g0022 23 124970 130920 hybridization
Lele22g1957 22 24217579 24224227 Lele23g0022 23 124970 130920 hybridization