Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1909 ATGGAGCTCAACGGCACGCCGGCTTCTCTTGGCTTTCATATGCCTGCAGAGTGGGAACCACACTCTCACTGTTGGATTGGTTGGCCTGAACGCCCAGATAATTGGAGAGACAATGCTGTTCCCGCCCAACATGTATTTGCCAGGGTAGCATCTGAAATCTCGAAGTTTGAGCCTGTGACTGTTTGTGCAAGTTCTGCTCAGTGGGAGAATGCTCGAAGTCTGCTGCCTTCAAATATCAGGGTCGCTGAGATGAGCTTCAATGATTCTTGGTTTCGTGACACTGGCCCCACTTTTGTTGTGAGCAGAAATCCCTCAAAGTCTGATACAGAGCCGAAGGTCGCAGGAATTGATTGGAATTTTAACAGCTGGGGAGGTTTAGATGGTGGTTGTTACAGTGTCTGGAATCTTGACCTCCTAGTTGCAAAGAAGATTCTGGAAATTGAGAGGATTCCTGGATTTCCCCAAAAACTTGTGCTTGAAGGTGGAAGCATCCATGTAGATGGAGAAGGGACTTGTCTTACAACTGAGGAATGTCTCTTGAACATAAACCGGAATCCAAGCTTGAGTAAGATCCAGATAGAGGATGAACTCAAAGCATATCTGGGAGTCAGAAAGATTATATGGTTGCCTCGTGGACTGTATGGGGATGATGATACTAATGGTCATATCGACAACATGTGCTGTTTTGCAAGGCCTGGTGCGGTTCTTCTGTCTTGGACTGATGATGAAACTGATCCGCAGTATGAAAGATCTGTAGAGGCATATTCTTTACTTTCAAGCGTAACCGATGCCAATGGTAGACAACTTGAAATAATTAAACTCCATGTACCTGGTCCACTCTATATGACGAAGGAAGAGGCTGCTGGGCTCACTAAGGCAAGCATCCAAGTTGCATATCTTGCTTTTTTTATCGGAAGTCTTCTTTGA 927 0.4542 MELNGTPASLGFHMPAEWEPHSHCWIGWPERPDNWRDNAVPAQHVFARVASEISKFEPVTVCASSAQWENARSLLPSNIRVAEMSFNDSWFRDTGPTFVVSRNPSKSDTEPKVAGIDWNFNSWGGLDGGCYSVWNLDLLVAKKILEIERIPGFPQKLVLEGGSIHVDGEGTCLTTEECLLNINRNPSLSKIQIEDELKAYLGVRKIIWLPRGLYGDDDTNGHIDNMCCFARPGAVLLSWTDDETDPQYERSVEAYSLLSSVTDANGRQLEIIKLHVPGPLYMTKEEAAGLTKASIQVAYLAFFIGSLL 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1909 308 TIGRFAM agmatine_aguA: agmatine deiminase 6 294 IPR017754 GO:0009446|GO:0047632
Lele24g1909 308 Pfam Porphyromonas-type peptidyl-arginine deiminase 13 304 IPR007466 GO:0004668|GO:0009446
Lele24g1909 308 PANTHER AGMATINE DEIMINASE-RELATED 2 292 IPR007466 GO:0004668|GO:0009446
Lele24g1909 308 Gene3D - 2 305 - -
Lele24g1909 308 SUPERFAMILY Pentein 3 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1909 Lele-ChrLele24 23796691 23800198 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1909 24 23796691 23800198 Lele17g0864 17 19939496 19944952 CCT
Lele24g1909 24 23796691 23800198 Lele18g0662 18 3978157 3983153 CCT
Lele24g1909 24 23796691 23800198 Lele19g0701 19 4062314 4067744 CCT
Lele24g1909 24 23796691 23800198 Lele20g0755 20 14508531 14513805 CCT
Lele24g1909 24 23796691 23800198 Lele24g1909 24 23796691 23800198 ECH
Lele21g1990 21 26839569 26844660 Lele24g1909 24 23796691 23800198 hybridization
Lele22g1957 22 24217579 24224227 Lele24g1909 24 23796691 23800198 hybridization