Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0755 ATGTCGAAGCTGCTTCTCCGCAGGCCTCATCTCAGTTCTGTTCTCCGATGCATCCCCTTTCTTTCCCCTCCCTTCTCTACCTCCATTGCCTCCCTTTCTCTCCTCCATTTTCGAAGCCGCTTCTCCGTTTCCATTTCTTCTCAATCGCACCTTCAAAGTATCTGCCCCTTTCGGTCCCGTAGGGACCTATCAGTTTGTGCTTTCGATTCTTCATCATCAGAGACTAAAGACGAGGAAGAAGCTGTCGGAAAGGATGGAATCGATAATCAATTTGTTAAAACTGCTGATGAGGATTATCCGCCCGGGGAATTTGAATTTGAACTCATTACGGGGTGGAGAGGATTTCTAGTGAAGCTTAAGATGCTGGTTGCCTTCCCTTGGGAGCGTGTTCGCAAGGGCAGCGTTCTCACAATGAAGTTGCGCGGCCAGTTTAAAGCTAGAATTAGCTTCGGATTTTTTGTTTTGGAGTATAAATGCGCTGTTCTCTCATGTGTTCAGATATCCGATCAAATAAAGAGTAGATTCTCTCGGGGATTATCTCTACCTCAGATTTGTGAGAACTTTCTGAAAGCAGCATATGATCCTCGTATTTCTGGTGTCTATCTCCATATTGATATTTTGAGTTGTGGTTGGGGTAAAGTAGAAGATATTCGAAGGCACATACTGAACTTCAAACAGTCAGGTGTTTTAGATAGCATAGGAATTGAACCACAAGTGGAAAGAATTGGCAAATACAAAAGCGCTGGGGATCAACTGGCCTGCAGAACCATATCTGAAGCAAACAGTGAGATGCTGACTGCATTGCTTGATAATATCTACACAAATTGGCTGGATAAAGTTTCCTCTGCAAAAGGAAAAAAAAGAGAAGATGTTGAGAACTTTATAAATGAAGGAGTCTATCAAGTAGACAAGCTGAAAGAAGAGGGCTTCATAACTAACATAATGTATGATAACGAGTTGCTCTTTCTGATTAACAACATGAAACCAAGTCATATTGATGGTCTAAGTCTTTCTGAAAGTGGAAGTCCAAAAAATATAAGGCTGCTATTATCCGAATTGACAGTCCTGGAGGTGATGCTCTCGCGTCTGATCTGTAAGTGCTGAAAAGTAGTGTGTGAGAAGGACAACCCGCAGGTTCAGCTAGCATACTCTTGGGTCATGGTCTGCAGGATGTGGAGAGAAATCAGACTTTTGGCTGCTTTAAAACCAGTCATTGCTTCAATGTCTGATGTGGCAGAAAGTGGAGGTTATTATATGGCAATGGCAGCAGGAACTATTGTTGCTGAAAGCCTTACTTTAACTGGTTCAATCGGAGTGGTTACAGGAAAATTCAACCTGGGTAAACTGTACGAGAAGATTGGATTTAATAAAGAAATCATATCAAGGGGAAGATATGCTGAGCTACTTGCGGCAGAACAACGTCCTTTTAGACCGGATGAAGCCGAGTTATTTGCCAAGTCTGCACAGAATGCTTACAAACAATTTCGAGATAAGGCAGCATTTTCCAGATCCATGACCGTAGAGAAGATGGAGGAGGTTGCACAGGGGAGAGTTTGGACCGGTAAAGATGCAGCCGCACGTGGTTTGGTTGACGCTATTGGTGGCCTTTCTCGTGCAATTGGCCCTAGCGAAATCGAAGGCCGACATACCCGAAGACAAACCGGTTACAGTTGTGGAGGTCTCAAGAACAAGCCCTTCCAGAGATTTTGA 1710 0.4363 MSKLLLRRPHLSSVLRCIPFLSPPFSTSIASLSLLHFRSRFSVSISSQSHLQSICPFRSRRDLSVCAFDSSSSETKDEEEAVGKDGIDNQFVKTADEDYPPGEFEFELITGWRGFLVKLKMLVAFPWERVRKGSVLTMKLRGQFKARISFGFFVLEYKCAVLSCVQISDQIKSRFSRGLSLPQICENFLKAAYDPRISGVYLHIDILSCGWGKVEDIRRHILNFKQSGVLDSIGIEPQVERIGKYKSAGDQLACRTISEANSEMLTALLDNIYTNWLDKVSSAKGKKREDVENFINEGVYQVDKLKEEGFITNIMYDNELLFLINNMKPSHIDGLSLSESGSPKNIRLLLSELTVLEVMLSRLICKCXKVVCEKDNPQVQLAYSWVMVCRMWREIRLLAALKPVIASMSDVAESGGYYMAMAAGTIVAESLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGRYAELLAAEQRPFRPDEAELFAKSAQNAYKQFRDKAAFSRSMTVEKMEEVAQGRVWTGKDAAARGLVDAIGGLSRAIGPSEIEGRHTRRQTGYSCGGLKNKPFQRF 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0755 569 SUPERFAMILY ClpP/crotonase 391 535 IPR029045 -
Lele20g0755 569 SUPERFAMILY ClpP/crotonase 168 316 IPR029045 -
Lele20g0755 569 Gene3D - 473 548 - -
Lele20g0755 569 Pfam Peptidase family S49 227 317 IPR002142 GO:0006508|GO:0008233
Lele20g0755 569 Pfam Peptidase family S49 399 540 IPR002142 GO:0006508|GO:0008233
Lele20g0755 569 Gene3D - 221 285 - -
Lele20g0755 569 PANTHER PROTEASE 4 390 540 - -
Lele20g0755 569 CDD S49_Sppa_N_C 390 540 IPR002142 GO:0006508|GO:0008233
Lele20g0755 569 Gene3D - 370 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0755 Lele-ChrLele20 14508531 14513805 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1990 21 26839569 26844660 Lele20g0755 20 14508531 14513805 CCT
Lele22g1957 22 24217579 24224227 Lele20g0755 20 14508531 14513805 CCT
Lele23g0022 23 124970 130920 Lele20g0755 20 14508531 14513805 CCT
Lele24g1909 24 23796691 23800198 Lele20g0755 20 14508531 14513805 CCT
Lele17g0864 17 19939496 19944952 Lele20g0755 20 14508531 14513805 hybridization
Lele18g0662 18 3978157 3983153 Lele20g0755 20 14508531 14513805 hybridization