Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1139 ATGGAGACAGAAAGTGAGATGAAACAATCCAAATTCAAGAGGATTTGTGTTTTCTGTGGCAGCTGCCCAGGCAAGAAAAGCAGTTACAGGGATGCTGCAATTGAGCTCGGAAGAGAGTTGGTGTCGAGGAATATTGATCTGGTTTATGGAGGAGGCAGCATGGGTTTAATGGGGCTGATTTCCCAAGCTGTTCATAATGGTGGCCGGCATGTGATAGGAGTTATTCCCAAGACACTCATGCCCAGAGAGATCACTGGAGAAACAGTTGGAGAAGTGAAGGCTGTTGCAGACATGCATCAAAGAAAAGCCGAGATGGCTAGGCACTCTGATGCCTTCATCGCCTTACCCGGTGGCTATGGGACACTCGAGGAGCTTCTGGAGGTGATCACTTGGGCTCAACTCGGAATCCATGATAAACCAGTGGGATTGTTGAATGTGGACGGATACTACAATTCCTTGTTATCATTTGTTGACAAAGCAGTGGAGGAAGGCTTCATCAGCCCTAATGCACGTCACATAATTGTCTCTGCCCCAACTGCAATAGAGCTTGTCAAAAAAATGGAGGAATATTTCCCACGCCATGAAGGAGTTGCTCCGAAGCGAAGCTGGGAAAATGAGCAGCTTATCAACGACTCCTCTGCGTATGAGATCTTAATGTGA 660 0.4712 METESEMKQSKFKRICVFCGSCPGKKSSYRDAAIELGRELVSRNIDLVYGGGSMGLMGLISQAVHNGGRHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMARHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFVDKAVEEGFISPNARHIIVSAPTAIELVKKMEEYFPRHEGVAPKRSWENEQLINDSSAYEILM 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1139 219 TIGRFAM TIGR00730: TIGR00730 family protein 13 190 IPR005269 GO:0009691|GO:0016787
Lele10g1139 219 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
Lele10g1139 219 PANTHER LOG FAMILY PROTEIN YJL055W 1 210 - -
Lele10g1139 219 FunFam CASP-like protein 3 189 - -
Lele10g1139 219 Gene3D - 2 189 - -
Lele10g1139 219 SUPERFAMILY MCP/YpsA-like 11 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1139 Lele-ChrLele10 22715952 22718214 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g1139 10 22715952 22718214 Lele29g0247 29 1437227 1444473 CCT
Lele10g1139 10 22715952 22718214 Lele30g1162 30 14542308 14553006 CCT
Lele10g1139 10 22715952 22718214 Lele31g1302 31 19121019 19128317 CCT
Lele10g1139 10 22715952 22718214 Lele32g0234 32 1409583 1416744 CCT
Lele30g1173 30 14623524 14627295 Lele10g1139 10 22715952 22718214 CCT
Lele10g1139 10 22715952 22718214 Lele12g0157 12 1193692 1196339 hybridization