Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0247 ATGTTTTGGAAGCTCCCATCTGCCTCCTCTCCCGTCGAGGCAATTTTGGATAAAGAGAATTTCGCTTTGGAAGAACTCCTGGATGAAGAAGAAATTATCCAAGAATGCAAGGCCTTAAACAGTCGTCTCATTAACTTCCTGAGGGATAGAGCTCAAGTGGAGCAATTACTACGCTACATTATTGAAGAGCCACCAGAAAATGCTGAAAGCAAACGGACCTTCAAGTTTCCATTCATTGCTTCTGAGGTTTTCACATGTGAAATTGATGTTATTTTGAAGACCTTGGTGGAGGAAGAAGAGTTGATGAACTTATTATTCTCCTTCTTGGAGCCTGATCGTTCTCATGGTTCCTTGCTAGCTGGGTATTTTAGCAAGGTTGTTGTTTGCCTAATGATTCGGAAGACAGTGCCGTTGATGAATTATGTTCAAGCCCATCAGAATGTTTTTGGCCAACTGGTTGATTTGATAGGAATTACATCTATTATGGAGGTTTTGGTTCGCTTAGTAGGTGCTGATGATCATGTGTATCCCAATTTTATAGATGTGATGCAATGGTTGGCTGAGAGCAACCTGCTAGAGATGATTGTTGATAAATTAACTCCTTCTAGTCCTCCTGAAGTTCATGCAAATGCGGCTGAAACCTTATGTACCATAACTCGAAATTCCTCATCTGCTTTAGCAATTAAGCTTTCAAGTCCAAGTTTTGTTGTAAGAATTATGGCCCATGCACTGAAAGATTCACAGTCAAATTCTAGCCTTGTTCACGCACTGTCAGTGTGTATTTCTTTGTTGAATCCAAAAAGATCAACATTTCCACCACCCCTTGTCCCTTCGTTCCGAAGTCAACAATTATATGAGGTTTCAACTCCAGTTAACCCAGATACGATTGGTGCAATGCTCCCAAAACTTGGTGACTTACTTATGGTTTTAAATGTGTCAACGGATGATAAGGTTTTGCCTACAACATATGGAGAATTGAGGCCTCCACTTGGGAAGCATCGATTGAAGATTGTCGAGTTTATAGCAGTGCTTCTGAGAACTGGCGGTGAAGTGGCTGAAAAGGAATTGGTCAGCTCAGGAATGATCCGACGAGTCATTGATCTTTTCTTTGAGTATCCATATAACAACTCGTTGCACCATCATGTAGAAAGTGTCATATTAATTTGTTTGGAGCGCAAAAGTGATGTCATTATTGATCACCTTCTTCAAGACTGTGATTTAATTGGAAAATTTCTTCAAGCAGATAAACATCCTATTCTTTCTGGTATTGATAATCAGCCAACTGTACCTGCTGCTGGAAAACAGGCACCACGGGCAGGAAACATTGGACATATTACTCGCATTGCTAATAAACTTATTCAATTGGCACATAATCAAAGCCAAATCCAAGCATATATTCAGGAAAATAGTGAGTGGAATCAATGGCAAACTACTGTTCTGCAGGAGCGTAACACGATCGAAAATGTTCACCGTTGGGCTTGTGGACGTCCTACTGCATTACACGATAGGATGAGGGATAGTGATGAAGATGATCTTCATGACAGAGACTATGACGTTGCAGCTTTAGCAAATAATTTGAACCACCCTTTTAAATATAATATTTATGGAACCGAGGAAAATGAAGAGGACCAAGGAGGTCTTGAACGTGATGCTGAGGATGTCTACTTTGATGATGACTCGGCAGAAGTTGTCATATCATCCTTAAGACTTGGTGATGATCAGGGGAGTAGTCTGTTTACAAACTCCAACTGGTTTGCGTTCCAAGATGACAGAATTGGTGATGCATCTGGGGGCACATCATCCTCTGAGATGATGAATGATATTAACTTGACCGGGGCTGCAAATGGTGGTAACAACAGTAGTGATGACGAAGTGGTGATTGGAGAGGATGAAGGTTTGGCTGAAAACAAGAATACCATTAATGGCACATCGAATTCAAGCACAAGTTTCTTCAGTGGTTTAACTGCCTTTGATTCCATGAACGGTGGCATTTTGAATTTGGAAGGTGAGAAGGCAAGTGTATCCCATGATATGGGATTCTTTGGGTTTGAAGCGCCAGACAATGAGGACTTGTTTGGGAATAGGCCGCTACCTGAGTGGGTGGGATGGGGTGAACCATCAGAGATACAAGCGGCCGGTTCAAGCACGAACCCCTTTTTGGATCATGATGAGTCCGATGTCAATTCTTCCGCCAAACCTCAATTAGGTGGCCCTAATCCTACTGCAAATGGAAAGTCGGTACCTTCAAATGGGTCTCCCACTCGAGATGTTAACAAGGGGGATGGTGAATCGAATCTAAAAACAGCAGCAGTACCCTCCCTATTTGAAGAGGATGTTGAATTTGTAGGCGTGGAATTGGAAGGTACTGAGAAGGCTATGGAACAGGCCCTAAAAGAAGGGATAGTTGGGGAAGCGGGGCCTTTGAAAAAGAATTCATCCCAAAAGGCGGTGGAGAGAGAGAATTCTGAAGAAGGTGGACCTGACCGTATGAAGGAATTCAATGACGCAAATTACTGGAGGGTGGACCAAGAGGTTGCGGTTCTGGAATGA 2550 0.4243 MFWKLPSASSPVEAILDKENFALEELLDEEEIIQECKALNSRLINFLRDRAQVEQLLRYIIEEPPENAESKRTFKFPFIASEVFTCEIDVILKTLVEEEELMNLLFSFLEPDRSHGSLLAGYFSKVVVCLMIRKTVPLMNYVQAHQNVFGQLVDLIGITSIMEVLVRLVGADDHVYPNFIDVMQWLAESNLLEMIVDKLTPSSPPEVHANAAETLCTITRNSSSALAIKLSSPSFVVRIMAHALKDSQSNSSLVHALSVCISLLNPKRSTFPPPLVPSFRSQQLYEVSTPVNPDTIGAMLPKLGDLLMVLNVSTDDKVLPTTYGELRPPLGKHRLKIVEFIAVLLRTGGEVAEKELVSSGMIRRVIDLFFEYPYNNSLHHHVESVILICLERKSDVIIDHLLQDCDLIGKFLQADKHPILSGIDNQPTVPAAGKQAPRAGNIGHITRIANKLIQLAHNQSQIQAYIQENSEWNQWQTTVLQERNTIENVHRWACGRPTALHDRMRDSDEDDLHDRDYDVAALANNLNHPFKYNIYGTEENEEDQGGLERDAEDVYFDDDSAEVVISSLRLGDDQGSSLFTNSNWFAFQDDRIGDASGGTSSSEMMNDINLTGAANGGNNSSDDEVVIGEDEGLAENKNTINGTSNSSTSFFSGLTAFDSMNGGILNLEGEKASVSHDMGFFGFEAPDNEDLFGNRPLPEWVGWGEPSEIQAAGSSTNPFLDHDESDVNSSAKPQLGGPNPTANGKSVPSNGSPTRDVNKGDGESNLKTAAVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKKNSSQKAVERENSEEGGPDRMKEFNDANYWRVDQEVAVLE 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0247 849 Pfam SIT4 phosphatase-associated protein 355 489 IPR007587 GO:0019903|GO:0043666
Lele29g0247 849 Pfam SIT4 phosphatase-associated protein 129 348 IPR007587 GO:0019903|GO:0043666
Lele29g0247 849 MobiDBLite consensus disorder prediction 813 831 - -
Lele29g0247 849 MobiDBLite consensus disorder prediction 709 759 - -
Lele29g0247 849 MobiDBLite consensus disorder prediction 802 831 - -
Lele29g0247 849 SUPERFAMILY ARM repeat 138 559 IPR016024 -
Lele29g0247 849 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 821 IPR007587 GO:0019903|GO:0043666
Lele29g0247 849 MobiDBLite consensus disorder prediction 708 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0247 Lele-ChrLele29 1437227 1444473 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1165 09 20740357 20745753 Lele29g0247 29 1437227 1444473 CCT
Lele10g1139 10 22715952 22718214 Lele29g0247 29 1437227 1444473 CCT
Lele29g0247 29 1437227 1444473 Lele31g1302 31 19121019 19128317 hybridization
Lele29g0247 29 1437227 1444473 Lele32g0234 32 1409583 1416744 hybridization