Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0234 ATGTTTTGGAAGCTCCCATCTATATCTGCCTCCTCCCCCGTTGAGGCAATTTTGGATAAAGAGAATTTCACTTTGGAAGAGCTCCTGGATGAAGAAGAAATTATCCAAGAATGCAAGGCTTTAAACAGTCGTCTCATTAACTTCCTGAGAGATAGAGCTCAAGTGGAGCAATTACTACGCTACATTATTGAAGAGCCAGCAGAAAATGCTGAAAGCAAACGGACCTTCAAGTTTCCATTCATTGCTTGTGAGGTTTTTACATGTGAAATTGATGTTATTTTGAAGACCTTGGTGGAGGAAGAAGAGTTGATGAACTTATTATTCTCCTTCTTGGAGCCTGATCGATCCCATGGTTCCTTGCTAGCTGGGTATTTTAGCAAGGTTGTTGTTTGCCTAATGATTCGGAAGACAGTGCCGCTGATGAACTATGTTCAAGCCCATCAGAATGTTTTTGGCCAACTGGTTGATTTGATAGGAATTACATCTATTATGGAGGTTTTGGTTCGCTTAGTAGGTGCTGATGATCACATGTATCCCAATTTTATAGATGTGATGCAATGGTTGGCTGAGAGCAACCTGTTAGAGATGATTGTTGATAAATTAACTCCTTCTAGTCCTCCTGAAGTTCATGCAAATGCGGCTGAAACCTTATGTACCATCACTCGAAATTCCTCATCTGCTTTGGCAATTAAACTTTCAAGTCCAAGTTTTGTTGTAAGAATTATGGACCATGCCCTGAAAGATTCACAGTCAAAGTCTAGCCTTGTTCACTCACTTTCAGTGTGTATTTCTTTGTTGAATCCAAAAAGATCAACATTTCCACCTCCCCTAGTTCCTTCTTTCCGAAGTCAACAATTACATGAGGTTTCAACTCCAGTTAACCCAGATACCATTGGTGCAATGCTCCCAAAACTTGGTGACTTACTTATGGTTTTAAATGTGTCAACGGATGATAAGGTTTTGCCTACAACATATGGAGAATTGCGGCCTCCACTTGGGAAGCATCGATTAAAGATTGTCGAGTTTATAGCAGTGCTTCTGAGAACTGGCGGTGAAGTGGCTGAAAAGGAATTGGTCAGCTCAGGAATGATCCGACGAGTCATTGACCTTTTCTTTGAGTATCCATATAACAACTCGTTGCACCATCATGTAGAAAGTATCATATTAATTTGTTTGGACCGCAGAAGTGATGTCATTATTGATCACCTTCTTCAAGAGTGTGACTTAATTGGAAAATTTCTTCAAGAAGATAAAAATCCTATTCTGTCTGGTATTGATAATCAGCCAACTGTACCTGCTGCTGGAAAACAGGCACCACGGGCAGGAAACATTGGGCATATTACTCGCATTGCTAATAAACTTATTCAATTGGCACATAATCAAAGCCACATACAAGCATATATTCAGGAAAATAGTGAGTGGAATCAATGGCAAACTACTGTTCTGCAGGAGCGTAACATGATTGAAAATGTTCACCGTTGGGCCTGTGGACGTCCTACTGCATTACATGATAGGATGAGGGATAGTGATGAAGATGATCTTCATGACAGAGACTATGACGTTGCAGCTTTAGCAAATAATTTGGGCCACCCTTTTAAATATAATATTTATGGAACTGAGGAAAATGAAGAGGACCAACGAGGTCTTGATCGTGATGCTGAGGATGTCTATTTTGATGATGACTCGGCAGAAGTTGTCATATCATCATTAAGACTTGGTGATGATCAGGGGAGTAGTCTGTTTACAAACTCCAACTGGTTTGCATTCCAAGATGACAGAATTGGTGATGCCCCTGGGGGCACATCATCCTCTGAGATGATGGATGAGATTAACTTGAACGGGGCTGCAAATGGTGGTAACAACAGTAGCGATGACGAAGTGGTGATTGGAGAGGATGAAGGTTTGGCTGAAAACAAAAATACTATTAATGGCATATCGAATTCTAGCACAAGTTTCTTCAGCGGTTTAACTGCCTTTGATTCCATGAACGGTGGCATTTTGAATTTGGAAGGTGAGCAGGCAAGTGTGTCCCATGATATGGGATTCTTTGGGTTTGAAGCGCCAGACAATGAGGACTTGTTTGGGGATAGGCCTCTACCTGAGTGGGTGGGATGGGGTGAACCAGCAGATATACAAGTGGCTGGTTCAAGCACGAACCCCTTTGTGGATCATGATGAGTCGGATGTCAATTCTCCCGCCAATCCTCAATTAGGTAGCCCTAGTCCTACTGCAAATGGGGAGTCCGTACCTTCAAGTGGGTCTCCGTCTACTAGAGATGTCAGCAAGGAGGATGGTGACTCGAATCTAAAAACAGCAGCGGTACCCTCCCTATTTGAAGAGGATGTTGAATTTGTAGGCTTGGAATTGGAAGGTACTGAGAAGGCTATGGAACAGGCTCTAAAAGAAGGAATAGTTGGGGAAGCTGGACCTTTGAAAAAGAACACATCCCAAAAGGCGGCGGAGAGGGAGAATTCTGAAGAAGGCGGACCCGACCGTATGAAAGAATTCAATGACGCAAATTACTGGAGGGTGGACCAAGAGGTTGCGGTTCTGGAATGA 2559 0.4252 MFWKLPSISASSPVEAILDKENFTLEELLDEEEIIQECKALNSRLINFLRDRAQVEQLLRYIIEEPAENAESKRTFKFPFIACEVFTCEIDVILKTLVEEEELMNLLFSFLEPDRSHGSLLAGYFSKVVVCLMIRKTVPLMNYVQAHQNVFGQLVDLIGITSIMEVLVRLVGADDHMYPNFIDVMQWLAESNLLEMIVDKLTPSSPPEVHANAAETLCTITRNSSSALAIKLSSPSFVVRIMDHALKDSQSKSSLVHSLSVCISLLNPKRSTFPPPLVPSFRSQQLHEVSTPVNPDTIGAMLPKLGDLLMVLNVSTDDKVLPTTYGELRPPLGKHRLKIVEFIAVLLRTGGEVAEKELVSSGMIRRVIDLFFEYPYNNSLHHHVESIILICLDRRSDVIIDHLLQECDLIGKFLQEDKNPILSGIDNQPTVPAAGKQAPRAGNIGHITRIANKLIQLAHNQSHIQAYIQENSEWNQWQTTVLQERNMIENVHRWACGRPTALHDRMRDSDEDDLHDRDYDVAALANNLGHPFKYNIYGTEENEEDQRGLDRDAEDVYFDDDSAEVVISSLRLGDDQGSSLFTNSNWFAFQDDRIGDAPGGTSSSEMMDEINLNGAANGGNNSSDDEVVIGEDEGLAENKNTINGISNSSTSFFSGLTAFDSMNGGILNLEGEQASVSHDMGFFGFEAPDNEDLFGDRPLPEWVGWGEPADIQVAGSSTNPFVDHDESDVNSPANPQLGSPSPTANGESVPSSGSPSTRDVSKEDGDSNLKTAAVPSLFEEDVEFVGLELEGTEKAMEQALKEGIVGEAGPLKKNTSQKAAERENSEEGGPDRMKEFNDANYWRVDQEVAVLE 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0234 852 MobiDBLite consensus disorder prediction 802 839 - -
Lele32g0234 852 MobiDBLite consensus disorder prediction 712 758 - -
Lele32g0234 852 Pfam SIT4 phosphatase-associated protein 356 491 IPR007587 GO:0019903|GO:0043666
Lele32g0234 852 Pfam SIT4 phosphatase-associated protein 131 350 IPR007587 GO:0019903|GO:0043666
Lele32g0234 852 MobiDBLite consensus disorder prediction 816 839 - -
Lele32g0234 852 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 822 IPR007587 GO:0019903|GO:0043666
Lele32g0234 852 SUPERFAMILY ARM repeat 182 561 IPR016024 -
Lele32g0234 852 MobiDBLite consensus disorder prediction 711 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0234 Lele-ChrLele32 1409583 1416744 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1165 09 20740357 20745753 Lele32g0234 32 1409583 1416744 CCT
Lele10g1139 10 22715952 22718214 Lele32g0234 32 1409583 1416744 CCT
Lele29g0247 29 1437227 1444473 Lele32g0234 32 1409583 1416744 hybridization
Lele30g1162 30 14542308 14553006 Lele32g0234 32 1409583 1416744 hybridization