Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1162 ATGATCCGTCTCATACATATCGGTGCAGGCCATGCTTTTTACATGTTTTGGAAGCTCCCATCTATATCTGCCTCCTCCCCCGTTGAGGCAATTTTGGATAAAGAGAATTTCACTTTGGAAGAGCTACTGGATGAAGAAGAAATTATCCAAGAATGCAAGGCCTTAAACAGTCGTCTCATTAACTTCCTGAGAGATAGAGCTCAAGTGGAGCAATTACTACGCTACATTATTGAAGAGCCACCAGAAAATGCTGAAAGCAAACGGACCTTCAAGTATGCTGTTGTAACAGAATTTGTTGCCAATGAACTTCATATGAAATTTTCTGTTGCTTCAATTTTCTTGTTTTTGCAACCTCAGCATCTGATTTTTGGTTTGTGGTTTAGGTTTCCATTCATTGCTTGTGAGGTTTTTACATGTGAAATTGATGTTATTTTGAAGACCTTGGTGGAGGAAGAAGAGTTGATGAACTTATTATTCTCCTTCTTGGAGCCTGATCGTTCCCATGGTTCCTTGCTAGCTGGGTATTTTAGCAAGGTTGTTGTTTGCCTAATGATTCGGAAGACAGTGCCGCTGATGAACTATGTTCAAGCCCATCAGAATGTTTTTGGACAACTGGTTGATTTGATAGGAATTACATCTGTTATGGAGGTTTTGGTTCGCTTAGTAGGTGCTGATGATCACATGTATCCCAATTTTATAGATGTGATGCAATGGTTGGCTGAGAGCAACCTGTTAGAGATGATTGTTGATAAATTAACTCCTTCTAGTCCTCCTGAAGTTCATGCAAATGCGGCTGAAACCTTATGTACCATCACTCGAAATTCCTCATCTGCTTTGGCAATTAAACTTTCAAGTCCAAGTTTTGTTGTAAGAATTATGGATCATGCACTGAAAGATTCACAGTCAAAGTCTAGCCTTGTTCACTCACTTTCAGTGTGCATTTCTTTGTTGAGTCCAAAAAGATCAACATTTCCACCTCCCCTAGTTCCTTCTTTCCGAAGTCAACAATTACATGAGGTTTCAACTCCAGTTAACCCAGATACCATTGGTGCAATGCTCCCAAAACTTGGTGACTTACTTATGGTTTTAAATGTGTCAACGGATGATAAGGTTTTGCCTACAACATATGGAGAATTGCGGCCTCCACTTGGGAAGCATCGATTAAAGATTGTCGAGTTTATAGAAGTGCTTCTGAGAACTGGCGGTGAAGTGGCTGAAAAGGAATTGCTCAGCTCAGGAATGATCCGACGAGTCATTGACCTTTTCTTTGAGTATCCATATAACAACTCGTTGCACCATCATGTTGAAAGTATCATATTAATTTGTTTGGAGCGCAAAAGTGATGTCATTATTGATCACCTTCTTCAAGAGTTTGATTTAATTGGAAAATTTCTTCAAGCAGATAAACATCCTATTCTTTCTGGTATTGATAATCAGCCAACTGTACCTGCTGCTGGAAAACAGGCACCACGGGCAGGAAACATTGGGCATATTACTAGCATTGCTAATAAACTTATTCAATTGGCACATAATCAAAGCCACATACAAGCATATATTCAGGAAAATGGTGAGTGGAATCAATGGCAAACTACTGTTCTGCAGGAGCGTAACATGATTGAAAATGTTCACCGTTGGGCCTGTGGACGTCCTACTGCATTACATGATAGGATGAGGGATAGTGATGAAGATGATCTTCATGACAGAGACTATGACGTTGCAGCTTTAGCAAATAATTTGAGCCACCCTTTTAAATATAGTATTTATGGAACTGAGGAAAATGAAGAGGACCAAGGAGGTCTTGATCATCGTGATGCTGAGGATGTCTATTTTGATGATGACTCAGCAGAAGTTGTCATATCATCCTTAAGACTTGGTGATGATCAGGGGAGTCTGTTTACAAACTCCAACTGGTTTGCTTTCCAAGATGACAGAATTGGTGATGCCCCTGGGGGCACATCATCCTCTGAGATGATGGATGAGATTAACTTGAACGGGGCTGCAAATGGTGGTAACAACAGTAGCGATGACGAAGTGGTGATTGGAGAGGATGAAGGTTTGGCTGAAAACAAAAATACTATTAATGGCACATCGAATTCTAGCACAAGTTTCTTCAGCGGTTTAACTGCCTTTGATTCCATGAATGGTGGCATTTTGAATTTGGAAGGTGAGAAGGCAAGTGTGTCCCATGATATGGGATTCTTTGGGTTTGAAGCGCCAGACAATGAGGACTTGTTTGGGGATAGGCCGCTACCTGGGTGGGTGGGATGGGGTGAACCAGCAGATATACAAGTGGCTGGTTCAAGCACGAACCCCTTTGTGGATCATGATGAGTCAGAGGTCAATTCTCCCGCCAATCCTCAATTAGGTAGCCCTAGTCCTACTGCAAATGGGGAGTCCGTACCTTCAAGTGGGTCTCCGTCTAGAGATGTTAGCAAGGGGGATGGTGACTCGAATCTAAAAACAGCAGCGGTACCCTCCCTATTTGAAGAGGATGTTGAATTTGTTGGCTTGGAATTGGAAGGTACTGAGAAGGCTATGGAACAGGCTCTAAAAGAAGGAATAGTTGGGGAAGCCGGACCTTTGAAAAAGAACACATCCCAAAAGGCGGCGGAGAGGGAGAATTCTGAAGAAGGTGGACCTGACCTTAAGAACGAATTCAATGACGCAAATTACTGGAAGGTGGACCAAGAGGTTGCGGTTCTGGAATGA 2709 0.4205 MIRLIHIGAGHAFYMFWKLPSISASSPVEAILDKENFTLEELLDEEEIIQECKALNSRLINFLRDRAQVEQLLRYIIEEPPENAESKRTFKYAVVTEFVANELHMKFSVASIFLFLQPQHLIFGLWFRFPFIACEVFTCEIDVILKTLVEEEELMNLLFSFLEPDRSHGSLLAGYFSKVVVCLMIRKTVPLMNYVQAHQNVFGQLVDLIGITSVMEVLVRLVGADDHMYPNFIDVMQWLAESNLLEMIVDKLTPSSPPEVHANAAETLCTITRNSSSALAIKLSSPSFVVRIMDHALKDSQSKSSLVHSLSVCISLLSPKRSTFPPPLVPSFRSQQLHEVSTPVNPDTIGAMLPKLGDLLMVLNVSTDDKVLPTTYGELRPPLGKHRLKIVEFIEVLLRTGGEVAEKELLSSGMIRRVIDLFFEYPYNNSLHHHVESIILICLERKSDVIIDHLLQEFDLIGKFLQADKHPILSGIDNQPTVPAAGKQAPRAGNIGHITSIANKLIQLAHNQSHIQAYIQENGEWNQWQTTVLQERNMIENVHRWACGRPTALHDRMRDSDEDDLHDRDYDVAALANNLSHPFKYSIYGTEENEEDQGGLDHRDAEDVYFDDDSAEVVISSLRLGDDQGSLFTNSNWFAFQDDRIGDAPGGTSSSEMMDEINLNGAANGGNNSSDDEVVIGEDEGLAENKNTINGTSNSSTSFFSGLTAFDSMNGGILNLEGEKASVSHDMGFFGFEAPDNEDLFGDRPLPGWVGWGEPADIQVAGSSTNPFVDHDESEVNSPANPQLGSPSPTANGESVPSSGSPSRDVSKGDGDSNLKTAAVPSLFEEDVEFVGLELEGTEKAMEQALKEGIVGEAGPLKKNTSQKAAERENSEEGGPDLKNEFNDANYWKVDQEVAVLE 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1162 902 MobiDBLite consensus disorder prediction 866 883 - -
Lele30g1162 902 MobiDBLite consensus disorder prediction 850 888 - -
Lele30g1162 902 Pfam SIT4 phosphatase-associated protein 408 542 IPR007587 GO:0019903|GO:0043666
Lele30g1162 902 Pfam SIT4 phosphatase-associated protein 182 401 IPR007587 GO:0019903|GO:0043666
Lele30g1162 902 MobiDBLite consensus disorder prediction 749 824 - -
Lele30g1162 902 MobiDBLite consensus disorder prediction 763 812 - -
Lele30g1162 902 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 127 872 IPR007587 GO:0019903|GO:0043666
Lele30g1162 902 SUPERFAMILY ARM repeat 238 611 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1162 Lele-ChrLele30 14542308 14553006 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1165 09 20740357 20745753 Lele30g1162 30 14542308 14553006 CCT
Lele10g1139 10 22715952 22718214 Lele30g1162 30 14542308 14553006 CCT
Lele30g1162 30 14542308 14553006 Lele31g1302 31 19121019 19128317 hybridization
Lele30g1162 30 14542308 14553006 Lele32g0234 32 1409583 1416744 hybridization