Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0157 ATGGAGACAGAAAGTGAGATGAAACAATCCAAATTCAAGAGGATTTGTGTTTTCTGTGGCAGCAGCCATGGCAAGAAAAGCAGTTACAGGGATGCTGCAATTGAGCTTGGAAGAGAGTTGGTGTCGAGGAATATTGATCTGGTTTATGGAGGAGGCAGCATGGGTTTAATGGGGCTGATTTCCCAAGCTGTTTATAATGGTGGCCGGCATGTGATAGGAGTTATTCCCACGACACTCATGCCCAGAGAGATCACTGGAGAAACAGTGGGAGAAGTGAAGGCTGTTGCAGACATGCATCAAAGAAAAGCCGAGATGGCTAGGCACTCTGATGCCTTCATCGCCTTACCCGGTGGCTATGGGACACTCGAGGAGCTTCTGGAGGTGATCACTTGGGCTCAACTCGGAATCCATGATAAACCAGTGGGATTGTTGAATGTGGACGGATACTACAATTCCCTGTTATCATTTGTTGACAAAGCAGTGGAGGAAGGCTTCATTAGCCCTAATGCACGTCACATAATTGTCTCTGCCCCAACTGCAATAGAGCTTGTCAAAAAAATGGAGGAATATTTCCCACGCCATGAAGGAGTTGCTCCGAAGCGAAGCTGGGAAAATGAGCAGCTTATCAACGACTCCTCTGCGTATGAGATCTTAATGTGA 660 0.4697 METESEMKQSKFKRICVFCGSSHGKKSSYRDAAIELGRELVSRNIDLVYGGGSMGLMGLISQAVYNGGRHVIGVIPTTLMPREITGETVGEVKAVADMHQRKAEMARHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFVDKAVEEGFISPNARHIIVSAPTAIELVKKMEEYFPRHEGVAPKRSWENEQLINDSSAYEILM 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0157 219 PANTHER LOG FAMILY PROTEIN YJL055W 1 210 - -
Lele12g0157 219 SUPERFAMILY MCP/YpsA-like 11 190 - -
Lele12g0157 219 Gene3D - 2 189 - -
Lele12g0157 219 TIGRFAM TIGR00730: TIGR00730 family protein 13 190 IPR005269 GO:0009691|GO:0016787
Lele12g0157 219 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
Lele12g0157 219 FunFam CASP-like protein 3 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0157 Lele-ChrLele12 1193692 1196339 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1173 30 14623524 14627295 Lele12g0157 12 1193692 1196339 CCT
Lele09g1165 09 20740357 20745753 Lele12g0157 12 1193692 1196339 hybridization
Lele10g1139 10 22715952 22718214 Lele12g0157 12 1193692 1196339 hybridization