Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1165 ATGGATACGGAAACTGAGATGAAAAAATCCAAATTCAAGAGGATTTGTGTTTTCTGTGGCAGCAGCCCTGGCAAGAAAAGCAGTTACAGGGATGCTGCAATTGAGCTCGGAAGAGAGTTGGTGTCGAGGAATATTGATCTGGTCTATGGAGGAGGCAGCATTGGTTTAATGGGGCTGATTTCCCAAGCTGTTTATAATGGTGGACGCCATGTGATAGGAGTTATTCCCAAGACACTCATGCCTAGAGAGATCACTGGAGAAACTGTGGGAGAAGTGAAGGCTGTTGCAGACATGCATCAAAGAAAAGCCGAGATGGCCAGGCACTCTGATGCCTTCATCGCCTTACCAGGTGGCTATGGGACACTGGAGGAGCTTCTGGAGGTAATAACTTGGGCTCAACTTGGAATCCATGATAAACCAGTGGGATTGTTGAACGTGGACGGATACTACAATTCCTTGTTATCATTCGTTGACAAAGCAGTGGAGGAAGGCTTCATTAGCCCTAATGCACGTCACATAATTGTCTCTGCACCATCTGCAATAGAGCTTGTCAAGAAGATGGAGGAATATTTCCCACGCCATGAAGGAGTTGCTCCAAAGCGAAGCTGGGAAAATGAGAAGCTTAACAAGGGCACCCCTACGTATGAGATCTTAAGCAAGGAGATTCAACCAATTACTCCATCTCAAGTTTGTGAGAACGAGAAGATTGACTTCATGCAGAAGAAATCCAATGATGCTCAGATGATTAAGTTGAAGAGAGAGCTTTACAATGAGGTGTTGGAGTTCCAAAGAAAAAACATTGGTTCAGGGACTCTTGCTCAGCTCATGGCAATGAAATCACGATGGAGTCTGATAAACAGACCTAAAATCACTGTCATATTGGATAGCTTCAAAAGAAAAACACTTTGTTCACAACTTGATTCTTTGCTTCAACAGACGCTTCCATTCCATCAAGTTTGGGTTCTTTCATTTGGCAGCCCTAATGAGGCATCCCTCAAGAGGATTGTAGATAGCTATAATGATTCAAGAATCAGCTTCATAAGCTCCACTTAG 1053 0.4378 MDTETEMKKSKFKRICVFCGSSPGKKSSYRDAAIELGRELVSRNIDLVYGGGSIGLMGLISQAVYNGGRHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMARHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFVDKAVEEGFISPNARHIIVSAPSAIELVKKMEEYFPRHEGVAPKRSWENEKLNKGTPTYEILSKEIQPITPSQVCENEKIDFMQKKSNDAQMIKLKRELYNEVLEFQRKNIGSGTLAQLMAMKSRWSLINRPKITVILDSFKRKTLCSQLDSLLQQTLPFHQVWVLSFGSPNEASLKRIVDSYNDSRISFISST 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1165 350 TIGRFAM TIGR00730: TIGR00730 family protein 13 190 IPR005269 GO:0009691|GO:0016787
Lele09g1165 350 SUPERFAMILY MCP/YpsA-like 12 190 - -
Lele09g1165 350 PANTHER LOG FAMILY PROTEIN YJL055W 6 209 - -
Lele09g1165 350 FunFam CASP-like protein 3 189 - -
Lele09g1165 350 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
Lele09g1165 350 Gene3D - 2 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1165 Lele-ChrLele09 20740357 20745753 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1165 09 20740357 20745753 Lele29g0247 29 1437227 1444473 CCT
Lele09g1165 09 20740357 20745753 Lele30g1162 30 14542308 14553006 CCT
Lele09g1165 09 20740357 20745753 Lele31g1302 31 19121019 19128317 CCT
Lele09g1165 09 20740357 20745753 Lele32g0234 32 1409583 1416744 CCT
Lele30g1173 30 14623524 14627295 Lele09g1165 09 20740357 20745753 CCT
Lele09g1165 09 20740357 20745753 Lele12g0157 12 1193692 1196339 hybridization