Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1519 ATGCTGCCGATACAACCACCGCCGTTGCTCATTTCTGATTCCTTCGCTAAGGACGCTATAATTTCCTGGTTTCGCAGCGAGTTTGCGGCTGCAAACGCCATCATCGACGCCCTGTGTGGTCATTTAGCTCAGCTTTCGGACGCCTCTTCTGACTACGATTCCGTGTTCACGGCAATTCACCTTCGTCGACTTAACTGGATCCCAGTACTGCAGATGCAGAAATATGATTCCATAGCTGACGTGACGTTGGAGCTCCGTAAAGTGGCTGAGAAGAAAACTGAGACTAAGGAAATCGGGGGAGGTGAAAGGAGGATTGAGAATTTGGGGAATCATTTGGACGAAGAGAAGAAAATCGAAGAGAAAGGAACAAAGAATAATGTGAATTCTGAAGGCAACGAATGTCCTGAAGAGTATGATTCGCCCAACAGTGAAATTACTGATTCAGGAAGTCAAGAAATGCAAGGAAGTTTGATGAACATTAATATATGTTCAAAGCATGAAGAATGCGAAGGACGTTCTTCACAGATAACGTTGAGGAAAGGGTTTCAAGCTAAGGAGACAGTGAGCGGGCATATGGTAAATGTTGTGAAGGGATTGAAGCTATACGAGGACATTTTCACCGATTCTGAACTCAGCAAGCTCACTGATTTCGTCAATGACCTTCATGCTGCTGGCCAGACCGGAGAACTCTCTGGAGAAACTTTTATATTATTTAACAAGCAAATGAAGGGAAACAAACGAGAGATGATTCAGCTGGGCGTACCAATTTTTGGACAGATAAAGGAGTCTGCAAACAGCAATATAGAGCCAATTCCATCCCTCCTCCAAAATGTCATCGATCACCTTATTCAATGGCGTCTGCTTCCCGAATACAGAAGGCCAGATGGCTGTATCATCAACTTTTTTGAAGAGGGGGAATATTCTCAGCCATTCCTGAAACCACCACATCTGGATCAACCTCTGTCCACTCTTCTTCTTTCTGAATCAACTATGGCTTTTGGGCGTACCCTTATGAGCGAAAATGACGGGAACTACAAGGGGCCACTCATGCTCACATTGAAGAAGGGGTCTCTTCTAGTGATGAAAGGAAACAGTGCTGACATGGCTAGGCACGTCACGTGTCTATCCCCAAACAGAAGGATCAGCATCACCTTCTTCAGAGTGAGGCCAGACTCCAATCAATGCCACTCACCAACTCCTTCAATGATGAATGCCACGACTTTCTGTAAAACTGGAATTTCTTGTCCATATGGGTCGCCAAATGTACCTCCCAGTGGGCCCGAGGCAATGGGAATGATACCCAAATGGGGAATTCTCCGAGCTCCAATGGTGATGCTAGCCCCCGTGAGCCCTCGAAAGTTAGCCAGCGGTGGAGGAACTGGTGTGTTCTTGCCCTGGAATGTGCCATCCAGAAAACCTGCAAAGCATCTTCCACCACGCGCCCAACGAGGACGACTTCTGGCATTACCTTCCTCAGCTGAATCACACATATCAGACTCCTCTTCTGAACCCAGCATTAGTGCTTGA 1527 0.4663 MLPIQPPPLLISDSFAKDAIISWFRSEFAAANAIIDALCGHLAQLSDASSDYDSVFTAIHLRRLNWIPVLQMQKYDSIADVTLELRKVAEKKTETKEIGGGERRIENLGNHLDEEKKIEEKGTKNNVNSEGNECPEEYDSPNSEITDSGSQEMQGSLMNINICSKHEECEGRSSQITLRKGFQAKETVSGHMVNVVKGLKLYEDIFTDSELSKLTDFVNDLHAAGQTGELSGETFILFNKQMKGNKREMIQLGVPIFGQIKESANSNIEPIPSLLQNVIDHLIQWRLLPEYRRPDGCIINFFEEGEYSQPFLKPPHLDQPLSTLLLSESTMAFGRTLMSENDGNYKGPLMLTLKKGSLLVMKGNSADMARHVTCLSPNRRISITFFRVRPDSNQCHSPTPSMMNATTFCKTGISCPYGSPNVPPSGPEAMGMIPKWGILRAPMVMLAPVSPRKLASGGGTGVFLPWNVPSRKPAKHLPPRAQRGRLLALPSSAESHISDSSSEPSISA 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1519 508 SUPERFAMILY Clavaminate synthase-like 188 389 - -
Lele05g1519 508 MobiDBLite consensus disorder prediction 104 126 - -
Lele05g1519 508 MobiDBLite consensus disorder prediction 493 508 - -
Lele05g1519 508 Gene3D - 181 396 IPR037151 -
Lele05g1519 508 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 16 499 IPR044842 GO:0003729|GO:0006402|GO:0032451
Lele05g1519 508 Pfam 2OG-Fe(II) oxygenase superfamily 298 387 IPR044861 -
Lele05g1519 508 MobiDBLite consensus disorder prediction 104 150 - -
Lele05g1519 508 MobiDBLite consensus disorder prediction 127 150 - -
Lele05g1519 508 MobiDBLite consensus disorder prediction 469 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1519 Lele-ChrLele05 9747928 9752708 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1519 05 9747928 9752708 Lele13g2015 13 27436943 27440377 CCT
Lele05g1519 05 9747928 9752708 Lele14g1948 14 25779852 25783428 CCT
Lele05g1519 05 9747928 9752708 Lele15g0390 15 2247464 2250915 CCT
Lele05g1519 05 9747928 9752708 Lele16g0411 16 2223853 2227426 CCT
Lele05g1519 05 9747928 9752708 Lele05g1519 05 9747928 9752708 ECH
Lele05g1519 05 9747928 9752708 Lele07g1578 07 9754129 9758809 hybridization
Lele05g1519 05 9747928 9752708 Lele08g1367 08 8768024 8773016 hybridization