Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0411 ATGGCGGCTGGGCCAGCATTGCCGACCGATCATGTTCCTCCCATGGGACCTTCTATGGTGCCGATGCAATCAGCACCCATTATGGTTTCGGACTCCTTCGCTAAAGATGCTATCATTTCCTGGTTCCGCAGCGAATTTGCCGCCGCCAACGCCGTTATTGATGCTCTCTGTGGTCACCTTGCTCAGCTCAGTGCAGCCACTGGAGCCTACGACTACGATTCTGTTTTTTCTGCAATTCATCGCCGTAGATTGAACTGGATACCGGTCATACAAATGCAGAAGTATCACTCAATAGCTGAAGTGGCGGTGGAGCTTCGCAAAGTCGCTGAGAAGAAGACAGAGGCCAAAGAAAAGAGGCAAGATAACGGGAAGAATGAAGACGAGAGCTCTTGTTCGGAAGACAAAATGAAAATCAATCAGAAAATAATGGACAATGATGGAAATGGCGGTCACGAGGCTCCCGAAGAGTATGATTCACAGGAAAGTGAAATTACCGATTCAGGATCTCAAGAAATGCAAGCCAGTTTGATGAACAGCTGTATATGCTCCGACCACGAAGAATGTGAAGGACGTAGTGCCCAGATAAAGTTGACAAAAGGTTTCTCGGCAAAGGAGTCGGTGAATGTGGTGAAAGGATTGAAGTTATATGAGGACGTTTTTACTGATTCAGAACTCTGCAAGCTCTATGACTTCGTCAATGAGATCCACTCTGCTGGCCAGAATGGAGAACTCTCAGGCGAAACTTTTATACTGTTCAACAAACAGATAAAGGGCAACAAGAGAGAGCTGATTCAGCTTGGTGTTCCAATCTTTGGAGAGATCAAGGAGGATGCAAAAAGCAATATAGAGCCAATTCCAGCTCTTCTTCAAAGTGTCATCGATCATCTTATTCAGTGGAAACTACTTCCAGAGTACAAAAGGCCAAATAGTTGTATCATCAACTTTTTTGAAGAGGGTGAATATTCTCAGCCATTCCTTAAACCACCTCACCTGGACCAACCTGTGTCTACTCTGCTTCTCTCTGAATCAACTATGGCTTTTGGGCGTACCCTTACCAGCGACACTGAAGGGAACTACAAAGGGCCACTCATGCTCTCACCGAAGAATGGGTCTCTTATAGTGATGAGAGGGAACAGTGCTGACATGGCAAGGCATGTGATGTGCCCATCCCCAAACAGAAGGGTGAGCATCACCTTTTTCAGGGTAAGGCCAGACTCCAATCAAAGCCGCACACCAATTCCTTCCGTGGCAACCACAATGAATGTTTGGCAACCTGGAGTAGGCAGCCCATTTGGTTTGGCAAATGAGTCCATGGATATGATGATGCCCAAGTTTGGAATAACCCGTGCCCCAATGGTCATGCTAACCCCTATGCGCCCTATGGTGTTGAGTTCTCGCAAGCTTCCTCGTGGTGGCGGGACAGGGGTGTTCTTACCCTGGAACGTCCCTTCCAGAAAACATGCCAAGCATCTTCCTCCTCGTGCCCAGAAAGGACGCCTTCTGGCTTTACCTCCCACAGTTGAGTCACACTCTCACATGGAAGAATCCACTTCTGACCCCACCATTACTGCTGAAGCACAAGCTTGA 1587 0.4764 MAAGPALPTDHVPPMGPSMVPMQSAPIMVSDSFAKDAIISWFRSEFAAANAVIDALCGHLAQLSAATGAYDYDSVFSAIHRRRLNWIPVIQMQKYHSIAEVAVELRKVAEKKTEAKEKRQDNGKNEDESSCSEDKMKINQKIMDNDGNGGHEAPEEYDSQESEITDSGSQEMQASLMNSCICSDHEECEGRSAQIKLTKGFSAKESVNVVKGLKLYEDVFTDSELCKLYDFVNEIHSAGQNGELSGETFILFNKQIKGNKRELIQLGVPIFGEIKEDAKSNIEPIPALLQSVIDHLIQWKLLPEYKRPNSCIINFFEEGEYSQPFLKPPHLDQPVSTLLLSESTMAFGRTLTSDTEGNYKGPLMLSPKNGSLIVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQSRTPIPSVATTMNVWQPGVGSPFGLANESMDMMMPKFGITRAPMVMLTPMRPMVLSSRKLPRGGGTGVFLPWNVPSRKHAKHLPPRAQKGRLLALPPTVESHSHMEESTSDPTITAEAQA 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0411 528 MobiDBLite consensus disorder prediction 506 528 - -
Lele16g0411 528 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 307 404 IPR005123 -
Lele16g0411 528 SUPERFAMILY Clavaminate synthase-like 207 403 - -
Lele16g0411 528 MobiDBLite consensus disorder prediction 111 141 - -
Lele16g0411 528 Coils Coil 98 118 - -
Lele16g0411 528 Gene3D - 199 410 IPR037151 -
Lele16g0411 528 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 34 505 IPR044842 GO:0003729|GO:0006402|GO:0032451
Lele16g0411 528 MobiDBLite consensus disorder prediction 111 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0411 Lele-ChrLele16 2223853 2227426 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1519 05 9747928 9752708 Lele16g0411 16 2223853 2227426 CCT
Lele13g2015 13 27436943 27440377 Lele16g0411 16 2223853 2227426 hybridization
Lele14g1948 14 25779852 25783428 Lele16g0411 16 2223853 2227426 hybridization