Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0390 ATGCCGATGGCGGCTGGGCCAGCAGTGCCGACCGATCACGCTCCTCCCATGGGACCTACCATGGTGCCGATGCAATCCGCACCCATTATGGTTTCGGACTCCTTTGCTAAAGATGCTATTATTTCTTGGTTCCGCAGTGAATTTGCCGCCGCCAACGCAGTTATTGACGCTCTCTGTGGCCACCTTGCTCTGCTCAGTTCAGCCACTGGAGCCTCCGACTATGATTCTGTTTTTTCCGCAATTCATTGCCGGAGATTGAACTGGATACCGGTCATACAAATGCAGAAGTATCACTCTATAGCTGAAGTAGCGGTGGAGCTTCGCAAAGTCGCTGAGAAGAAGACAGAGGCCAGAGAAAAGAGGCAAGATAACGGGAAGAGTGAGGACGAGAACACTTGTTCAGAAGACAAAAAGAAAATTAATCAGAAAATAATGGATAGTGACGGAAATGGCGGTCACGAGGCTTCCGAAGAGTATGATTCCCCGGAAAGTGAAATTACCGATTCAGGATCTCAAGAAATGCAAGCCAGTTTGATGAACAGCTGTATATGCTCCTACCACGAAGAATGTGAAGGACGTGGTGCCCACATAAAGTTGACAAAAGGTTTCTCGGCAAAGGAGTCGGTGAAGGGGCACATGGTGAATGTAGTGAAAGGATTGAAGTTATATGAGGACGTTTTCACTGATTCAGAACTCTGCAAGCTCTATGATTTCGTCAATGAGATCCATTCTGCTGGCCAGAATGGAGAACTCTCAGGCGAAACTTTTATACTGTTCAACAAACAGATGAAGGGCAACAAGAGAGAGCTGATTCAGCTTGGCGTTCCAATTTTTGGACAGATCAAGGAGGATGCAAAAAGCAACATAGAGCCAATTCCAGCTCTTCTTCAAAGTGTCATCGATCATCTTATTCAGTGGAAACTACTTCCAGAGTACAAAAGGCCAAATAGTTGCATGATCAACTTTTTTGAAGAGGGTGAATATTCTCAGCCATTCCTTAAACCACCTCATCTGGACCAACCTGTCTCTACTCTGCTTCTCTCTGAATCAACCATGGCTTTTGGGCGTACCCTTACCAGCGACAGTGAAGGGAACTACAAAGGGCCACTCATGCTCTCACCCAAGAATGGGTCTCTTATAGTGATGAGAGGGAACAGTGCTGACATGGCAAGGCATGTGATGTGCCCATCCCCAAACAGAAGGGCGAGCATCGCCTTTTTCAGGGTAAGGCCAGACTCCAACCAAAGCCAAACACCAATTCCTTCCGTGGCAACGGCAATGACTGTTTGGCAACCTGGAATGGGAACACCATTTGGTTTGGCAAATGACGAGGCCATGGATACGATGATGCCCAAGTTTGGAATAATACGTGCCCCAATGGTCATGCTAGCCCCTATGCGCCCTATGGTGTTGAGTTCTCGCAAGCTTCCTCGTGGTGGTGGGACAGGGGTTTTCTTACCCTGGAACGTTCCTTCCAGAAAACATGCCAAGCATCTTCCTCCTCGTGCCCAGAAAGGACGCCTTCTGGCTTTACCTCCCCCAGTTGAGTCTCACTCTCACATGGACGAGTCCACTTCTGACCCCACAATTACTGCTGAACCCCAAGCTTGA 1611 0.4823 MPMAAGPAVPTDHAPPMGPTMVPMQSAPIMVSDSFAKDAIISWFRSEFAAANAVIDALCGHLALLSSATGASDYDSVFSAIHCRRLNWIPVIQMQKYHSIAEVAVELRKVAEKKTEAREKRQDNGKSEDENTCSEDKKKINQKIMDSDGNGGHEASEEYDSPESEITDSGSQEMQASLMNSCICSYHEECEGRGAHIKLTKGFSAKESVKGHMVNVVKGLKLYEDVFTDSELCKLYDFVNEIHSAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKEDAKSNIEPIPALLQSVIDHLIQWKLLPEYKRPNSCMINFFEEGEYSQPFLKPPHLDQPVSTLLLSESTMAFGRTLTSDSEGNYKGPLMLSPKNGSLIVMRGNSADMARHVMCPSPNRRASIAFFRVRPDSNQSQTPIPSVATAMTVWQPGMGTPFGLANDEAMDTMMPKFGIIRAPMVMLAPMRPMVLSSRKLPRGGGTGVFLPWNVPSRKHAKHLPPRAQKGRLLALPPPVESHSHMDESTSDPTITAEPQA 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0390 536 Coils Coil 100 120 - -
Lele15g0390 536 MobiDBLite consensus disorder prediction 113 160 - -
Lele15g0390 536 SUPERFAMILY Clavaminate synthase-like 210 409 - -
Lele15g0390 536 MobiDBLite consensus disorder prediction 113 172 - -
Lele15g0390 536 Gene3D - 201 417 IPR037151 -
Lele15g0390 536 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 36 510 IPR044842 GO:0003729|GO:0006402|GO:0032451
Lele15g0390 536 MobiDBLite consensus disorder prediction 494 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0390 Lele-ChrLele15 2247464 2250915 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1519 05 9747928 9752708 Lele15g0390 15 2247464 2250915 CCT
Lele13g2015 13 27436943 27440377 Lele15g0390 15 2247464 2250915 hybridization
Lele14g1948 14 25779852 25783428 Lele15g0390 15 2247464 2250915 hybridization