Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1367 ATGAAAGCCGCTCCTGTACCACCGCCGATCGATCATTTTCTTTCGGCAGGGTCCACAATGCTGCCGCTGCAACCGCCGCCGCCGCCCTTGCTCATTTCTGATTCCTTCGCTAAGGACGCTATAATTTCCTGGTTTCGCAGCGAGTTTGCGGCTGCAAACGCCATCATCGACACTCTCTGTGGTCATTTAGCTCAGCTTTCTGACTCCTCTTCTGACTATGATTCCGTGTTCACGGCAATTCACCGCCGTCGACTTAACTGGATCCCGATACTGCAGATGCAGAAATATGATTCCATAGCTGATGTGACGTTGGAGCTCCGCAAAGTGGCTGAGAAGAAAGCTGAGACTAAGGAAATCGGGGGAGGTGAAAGGAGGATTGAGGATTTGGGGAATCACTTGGATGAAGAGAAGAGAATCGAAGAGAAAAGAACGGAGAATAATGCGAATTCTGAAGGCGACGAATGTCCTGAAGAGTATGATTCGCCCAACAGTGAAATTACTGATTCAGGATGTCAAGAAATGCAGGGAAGTTTGATGAACGTTAATATATGTTCAAAGCATGAAGAATGCCAAGGACGTTCTTCACAGATAACGTTGAGGAAAGGTTTTCAAGCGAAGGAGACAGTGAGGGGGCATATGGTGAATGTGGTGAAGGGATTGAAGCTATACGAGGACATTTTCACCAATTCTGAACTTAGCAAGCTCACTGATTTTGTCAATGAGCTTCATGCTGCTGGCCAGAATGGAGAACTCTCTGGAGAAACTTTTATACTATTTAACAAGCAAATGAAGGGAAACAAACGAGAGATGATTCAGCTGGGCGTACCAATTTTTGGACAGATAAAGGAGGATGCAATCAGCAATATAGAGCCAATTCCATCTCTCCTCCAAAATGTCATTGATCACCTTATCCAATGGCGTCTGCTTCCCGACTACAGAAGGCCAGATGGCTGTATCATGAACTTTTTTGAAGAGGGGGAATATTCTCAGCCATTCCTGAAACCACCACACCTGGATCAACCTCTGTCCACTCTTCTTCTTTCTGAATCAACCATGGCTTTTGGGCGTACCCTTATGAGCGAAAATGATGGGAACTACAAGGGGCCACTCATGCTCTCATTGAAGAAAGGGTCTCTTCTAGTGATGAGAGGAAACAGTGCTGACATGGCGAGGCACGTCATGTGTCCATCCCCAAACCGAAGGGTCAGCATCACCTTCTTCAGAGTGAGGCCAGACTCCAATCAATGCCAATCACCAACTCCTTCTCCTTCTATGATGAATTCCATGACCTTCTGGAAACCTGGAATTTCTGGTCCATATGGGTCGCCAAGTGTACCTCCCAGTGGGCCCGAGGCAATGGGAATGATGCCCAAATGGGGAATTCTGCGAGCTCCAATGGTGATGTTTGCCCCTGTGAGCCCTCGAAAATTAGCCAGTGGTGGAGGAACTGGTGTGTTCTTGCCCTGGAATGTGTCATCCAGAAAACCTGCTAAGCATCTTCCACCACGCGCCCAACGAGGACGACTTCTGGCATTACCTTCCTCAGCTGAATCGCAAATATCAGTCTCTTCTTCTGAACCCAGCATTAGCGCATGA 1596 0.4762 MKAAPVPPPIDHFLSAGSTMLPLQPPPPPLLISDSFAKDAIISWFRSEFAAANAIIDTLCGHLAQLSDSSSDYDSVFTAIHRRRLNWIPILQMQKYDSIADVTLELRKVAEKKAETKEIGGGERRIEDLGNHLDEEKRIEEKRTENNANSEGDECPEEYDSPNSEITDSGCQEMQGSLMNVNICSKHEECQGRSSQITLRKGFQAKETVRGHMVNVVKGLKLYEDIFTNSELSKLTDFVNELHAAGQNGELSGETFILFNKQMKGNKREMIQLGVPIFGQIKEDAISNIEPIPSLLQNVIDHLIQWRLLPDYRRPDGCIMNFFEEGEYSQPFLKPPHLDQPLSTLLLSESTMAFGRTLMSENDGNYKGPLMLSLKKGSLLVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQCQSPTPSPSMMNSMTFWKPGISGPYGSPSVPPSGPEAMGMMPKWGILRAPMVMFAPVSPRKLASGGGTGVFLPWNVSSRKPAKHLPPRAQRGRLLALPSSAESQISVSSSEPSISA 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1367 531 MobiDBLite consensus disorder prediction 131 150 - -
Lele08g1367 531 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 314 411 IPR005123 -
Lele08g1367 531 MobiDBLite consensus disorder prediction 512 531 - -
Lele08g1367 531 Gene3D - 202 418 IPR037151 -
Lele08g1367 531 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 37 520 IPR044842 GO:0003729|GO:0006402|GO:0032451
Lele08g1367 531 MobiDBLite consensus disorder prediction 494 531 - -
Lele08g1367 531 SUPERFAMILY Clavaminate synthase-like 209 410 - -
Lele08g1367 531 MobiDBLite consensus disorder prediction 131 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1367 Lele-ChrLele08 8768024 8773016 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1367 08 8768024 8773016 Lele08g1367 08 8768024 8773016 ECH
Lele05g1519 05 9747928 9752708 Lele08g1367 08 8768024 8773016 hybridization
Lele06g1369 06 8817712 8822202 Lele08g1367 08 8768024 8773016 hybridization