Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2015 ATGCCGATGGCGGCTGGGCTAGCATTGCCGACCGATCATGCTCCTCCCATGGGACCTACCATGGTGCCGCTGCAATCCGCACCTATTATGGTTTCGGACTCCTTTGCTAAAGATACTATTATTTCTTGGTTCCGCAGTGAATTTGCCGCCGCCAACGCAGTTATTGACGCTCTCTGTGGCCACCTCGCTCAGCTCAGTTCGGCCACTGGAGCCTCCGACTATGATTCTGTTTTTTCCGCAATTCATTGCCGGAGATTGAACTGGATACCAGTCATACAAATGCAGAAGTATCACTCAATAGCTGAAGTGGCGGCGGAGCTTCGCAAAGTCGCTGAGAAGAAGGCAGAGGCTAGAGAAAAGAGGCAAGATAACGGGAAGAGTGAGGACGAGAACACTTGTTCGGAAGACAACAAGAAAATCAATCCGAAAATAATGGACAGTGACGGAAATGGCGGTCACGAGGCTTCCGAAGAGTATGATTCACTGGAAAGTGAAATTACTGATTCAGGATCTCAAGAAATGCAAGCCAGTTTGATGAACAGCTGTATATGCTCCGACCACGACGAATGTGAAGAACGTGGTGCCCAGATAAAGTTGACAAAAGGTTTTTCGGCAAAGGAGTCGGTGAAGGGGCACATGGTGAATGTAGTGAAAGGATTGAAGTTATATGAGGACGTTTTCACTGATTCAGAACTCTGCAAGCTCTATGATTTCGTCAATGAGATCCATTCTGCTGGCCAAAAGGGAGAACTCTCAGGCGAAACTTTTATACTGTTCAACAAACAGATGAAGGGCAACAAGAGAGAGCTGATTCAGCTTGGTGTTCCAATTTTTGGACAGATCAAGGAGGATGCAAAAAGCAACATAGAGCCAATTCCAGCTCTTCTTCAAAGTGTCATCGATCATCTTATTCAGTGGAAACTACTTCCAGAGTACAAAAGGCCAAATAGTTGCACCATCAACTTTTTTGAAGAGGGTGAATATTCTCAGCCATTCCTTAAACCACCTCATCTGGATCAACCTGTGTCTATTCTGCTTCTCTCTGAATCAACCATGGCTTTTGGGCGTACCCTTACCAGCGACAGTGAAGGGAACTACAAAGGGCCACTCATGCTCTCACCCAAGAATGGGTCTCTTATAGTGATGAGAGGGAACAGTGCTGACATGGCAAGGCATGTGATGTGCCCATCCCCAAACAGAAGGGCGAGCTTCACCTTTTTCAGGGTAAGGCCAGACTCCAACCAAAGCCAAACACCAATTCCTTCCGTGGCAACCGCAATGACTGTGTGGCAACCTGGAATGGGAACACCATTTGGTTTGGCAAATGATGGGGCCATGGATATGATGATGCCCAAGTTTGGAATAATCCGTGCCCCGATGGTCATGCTAACCCCTATGCGCCCTATGGTGTTGAGTTCTCGCAAGCTTCCTCGTGGTGGTGGGACAGGGGTTTTCTTACCCTGGAAAGTTCCTTCCAGAAAACATGCCAAGCATCTTCCTCCTCGTGCCCAGAAAGGACGCCTTCTGGGTTTACCTCCCCCAGTTGAGTCTCACTCTCACATGGACGAGTCCACTTCTGACCCCACCATTACTGCTGAACCACCAGCTTGA 1611 0.4817 MPMAAGLALPTDHAPPMGPTMVPLQSAPIMVSDSFAKDTIISWFRSEFAAANAVIDALCGHLAQLSSATGASDYDSVFSAIHCRRLNWIPVIQMQKYHSIAEVAAELRKVAEKKAEAREKRQDNGKSEDENTCSEDNKKINPKIMDSDGNGGHEASEEYDSLESEITDSGSQEMQASLMNSCICSDHDECEERGAQIKLTKGFSAKESVKGHMVNVVKGLKLYEDVFTDSELCKLYDFVNEIHSAGQKGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKEDAKSNIEPIPALLQSVIDHLIQWKLLPEYKRPNSCTINFFEEGEYSQPFLKPPHLDQPVSILLLSESTMAFGRTLTSDSEGNYKGPLMLSPKNGSLIVMRGNSADMARHVMCPSPNRRASFTFFRVRPDSNQSQTPIPSVATAMTVWQPGMGTPFGLANDGAMDMMMPKFGIIRAPMVMLTPMRPMVLSSRKLPRGGGTGVFLPWKVPSRKHAKHLPPRAQKGRLLGLPPPVESHSHMDESTSDPTITAEPPA 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2015 536 MobiDBLite consensus disorder prediction 116 143 - -
Lele13g2015 536 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 36 508 IPR044842 GO:0003729|GO:0006402|GO:0032451
Lele13g2015 536 MobiDBLite consensus disorder prediction 116 170 - -
Lele13g2015 536 Gene3D - 203 417 IPR037151 -
Lele13g2015 536 Coils Coil 100 130 - -
Lele13g2015 536 SUPERFAMILY Clavaminate synthase-like 210 410 - -
Lele13g2015 536 MobiDBLite consensus disorder prediction 494 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2015 Lele-ChrLele13 27436943 27440377 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1519 05 9747928 9752708 Lele13g2015 13 27436943 27440377 CCT
Lele13g2015 13 27436943 27440377 Lele15g0390 15 2247464 2250915 hybridization
Lele13g2015 13 27436943 27440377 Lele16g0411 16 2223853 2227426 hybridization