Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1578 ATGAAAGCCGCTCCTGTGCCGCCGCCGATCGATCATTTTCTTTCGGCAGGGTCGACAATGCTGCCGATGCAACCACCGCCGTTGCCCATTTCTGATTCCTTCGCTAAGGACGCTATAATTTCCTGGTTTCGCAGCGAGTTTGCGGCTGCGAACGCCATCATCGACGCCCTTTGTGGTCATTTAGCTCAGCTTTCGGACGCCTCTTCTGACTATGATTCCGTGTTCATGGCAATTCACCTTCGTCGACTTAACTGGATCCCAATACTGCAGATGCAGAAATATGATTCCATAGCTGACGTGACGTTGGAGCTCCGCAAAGTGGCTGGGAAGAAAACTGAGACTAAGGAAATCGGGGAAGGTGAAAGAAGGATTGAGGATTTGGGGAATCATTTGGACGAAGAGAAGAAAATCGAAGAGAAAGGAACGGAGAATAGTGTGAATTCTGAAGGCGACGAATGTCCTGAAGAGTATGATTCTCCCAACAGTGAAATTACTGATTCAGGAAGTCAAGAAATGCAAGGAAGTTTGATGAACACTAATATATGTTCAAAGCATGAAGAATGCGAAGGACGTTCTTCACAGATAACGTTGAGGAAAGGTTTTCAAGCGAAGGAGACAGTGAGCGGGCATATGGTAAATGTTGTGAAGGGATTGAAGCTATACGAGGACATTTTCACGGATTCTGAACTCAGCAAGCTCACTGATTTCGTCAACGACCTTCATGCTGCTGGCCAGAATGGAGAACTCTCTGGAGAAACTTTTGTATTATTTAACAAGCAAATGAAGGGAAACAAACGAGAGATGATTCAGCTGGGCGTACCAATTTTTGGACAGATAAAGGAGGATGCAAACAGCAATATAGAGCCAATTCCATCTCTCCTCCAAAATGTCATCGATCACCTTATTCAATGGCGTCTGCTTCCCGAATACAGAAGGCCAGATGGCTGTATCATCAACTTTTTTGAAGAGGGGGAATATTCTCAGCCATTCCTGAAACCACCACACCTGGATCAACCTCTGTCCACTCTTCTTCTTTCTGAATCAACTATGGCTTTTGGGCGTAGCCTTATGAGCGAAAATGACGGGAACTACAAGGGGCCACTCATGCTCACATTGAAGAAGGGGTCTCTTCTAGTGATGAGAGGAAACAGTGCTGACATGGCGAGCAACGTCACGTGTCTATCCCCAAACAGAAGGGTCAGCATCACCTTCTTCAGAGTGAGGCCAGACTCCAATCAATGCCAATCACCAACTCCTTCAATGATGAATGCCACGACTTTCTGTAAAGCTGGAATTTCTGGTCCACATGGGTCGCCAAGTGTACCTCCCAGTGGGCCCGAGGCAATGGGAATGATACCCAAATGGGGAATTCTCCGAGCTCCAATGGTGATGTTAGCCCCTGTGAGCCCTCGAAAGTTAGCCAGCGGTGGAGGAACTGGTGTGTTCTTGCCCTGGAATGTGCCATCCAGAAAACCTGCAAAGCATCTTCCACCACGCGCCCAACGAGGACGACTTCTGGCATTACCTTCCTCAGCTGAATCCCACATATCAGACTCCTCTTCTGAACCCAGCATTAGTGCTTGA 1584 0.4754 MKAAPVPPPIDHFLSAGSTMLPMQPPPLPISDSFAKDAIISWFRSEFAAANAIIDALCGHLAQLSDASSDYDSVFMAIHLRRLNWIPILQMQKYDSIADVTLELRKVAGKKTETKEIGEGERRIEDLGNHLDEEKKIEEKGTENSVNSEGDECPEEYDSPNSEITDSGSQEMQGSLMNTNICSKHEECEGRSSQITLRKGFQAKETVSGHMVNVVKGLKLYEDIFTDSELSKLTDFVNDLHAAGQNGELSGETFVLFNKQMKGNKREMIQLGVPIFGQIKEDANSNIEPIPSLLQNVIDHLIQWRLLPEYRRPDGCIINFFEEGEYSQPFLKPPHLDQPLSTLLLSESTMAFGRSLMSENDGNYKGPLMLTLKKGSLLVMRGNSADMASNVTCLSPNRRVSITFFRVRPDSNQCQSPTPSMMNATTFCKAGISGPHGSPSVPPSGPEAMGMIPKWGILRAPMVMLAPVSPRKLASGGGTGVFLPWNVPSRKPAKHLPPRAQRGRLLALPSSAESHISDSSSEPSISA 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1578 527 MobiDBLite consensus disorder prediction 488 527 - -
Lele07g1578 527 MobiDBLite consensus disorder prediction 116 171 - -
Lele07g1578 527 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 35 518 IPR044842 GO:0003729|GO:0006402|GO:0032451
Lele07g1578 527 SUPERFAMILY Clavaminate synthase-like 207 408 - -
Lele07g1578 527 MobiDBLite consensus disorder prediction 116 146 - -
Lele07g1578 527 Gene3D - 200 416 IPR037151 -
Lele07g1578 527 MobiDBLite consensus disorder prediction 512 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1578 Lele-ChrLele07 9754129 9758809 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1578 07 9754129 9758809 Lele07g1578 07 9754129 9758809 ECH
Lele05g1519 05 9747928 9752708 Lele07g1578 07 9754129 9758809 hybridization
Lele06g1369 06 8817712 8822202 Lele07g1578 07 9754129 9758809 hybridization