Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1948 ATGGCGGCTGGCCCAGCATTGCCGACCGATCATGCTCCTCCCACGGGACCTACTATGGTGCCGATGCAATCAGCACCCATTATGGTTTCGGACTCCTTTGCTAAAGATGCTATCATTTCCTGGTTCCGCAGCGAATTTGCCGCCGCCAACGCCGTTATTGACGCTCTCTGTGGTCACCTTGCTCAGCTCAGTGCAGCCACTGGAGCCCCCGACTATGATTCTGTTTTTTCTGCAATTCATCGCCGGAGATTGAACTGGATACCGGTCATACAGATGCAGAAGTACCACTCAATAGCTGAAGTGGCGGTGGAGCTTCGCAAAGTCGCTGAGAAGAAGACAGAGGCCAAAGAAAAGAGGCAAGATAACGGGAAGAGTGAAGACGAGAGCAATTGTTTGGAAGACAAAAGGAAAATCAATCAGAAAATAATGGACAGTGATGGAAATGGCGGTCACGAGGCTACCGAAGAGTATGATTCACCGGAAAATGAAATTACCGATTCAGAAATGCAAAACAGTTTGATGAACAGCTGTATATGCTCCGACCACGAAGAATGTGAAGGACGTAGTGCCCAGATAAAGTTGACAAAAGGTTTCTCGGCAAAGGAGTCGGTGAAGGGGCACATGGTGAATGTGGTGAAAGGATTGAAGTTATATGAGGACGTTTTTACTGATTCAGAACTCTGCAAGCTCTATGACTTCGTCAATGAGATCCACTCTGCTGGCCAGAATGGAGAACTCTCAGGCGAAACTTTTATATTGTTCAACAAACAGATGAAGGGCAACAAGAGAGAGCTGATTCAGCTTGGTGTTCCAATCTTTGGACAGATCAAGGAGGATGCAAAAAGCAATATAGAGCCAATTCCAGCTCTTCTTCAAAGTGTCATCGATCATCTGATTCAGTGGAAACTACTTCCAGAGTACAAAAGGCCAAATAGTTGCATCATCAACTTTTTTGAAGAGGGTGAATATTCTCAGCCATTCCTTAAACCGCCTCACCTGGACCAACCTGTGTCTATCCTGCTTCTCCCTGAATCAACTATGGCATTTGGGCGTACCCTTACCAGCGACAGTGAAGGAAACTACAAAGGGCCACTCATGCTCTCACCGAAGAATGGGTCTCTTATAGTGATGAGAGGGAACAGTGCTGACATGGCAAGGCATGTGATGTGCCCATCCCCAAACAGAAGGGTGAGCATCACCTTTTTCAGGGTAAGGCCAGACTCTAACCAAAGCCAAACACCAATTCCTTCCGGGGCAACCGCAATGACTGTTTGGCAACCTGGAGGAGGCGGCCCATTTGGTTTGGCAAATGCGTCCATGGATATGATGATGCCCAAGTTTGGAATAATCCGTGCCCCAATGGTCATGCTAACCCCTATGCGCCCTATGGTGTTGAGTTCTCTCAAGCTTCCTCGTGGTGGTGGGACAGGGGTGTTCTTACCCTGGAACGTCCCTTCCAGAAAACATGCCAAGCATCTTCCTCCTCGTGCCCAGAAAGGACGCCTTCTGGCTTTACCTCCCCCAGTTGAGTCACACTCTCACATGGAAGAATCCACTTCTGACCCCACCATTACTGCTGAAGCACAAGCTTGA 1593 0.4834 MAAGPALPTDHAPPTGPTMVPMQSAPIMVSDSFAKDAIISWFRSEFAAANAVIDALCGHLAQLSAATGAPDYDSVFSAIHRRRLNWIPVIQMQKYHSIAEVAVELRKVAEKKTEAKEKRQDNGKSEDESNCLEDKRKINQKIMDSDGNGGHEATEEYDSPENEITDSEMQNSLMNSCICSDHEECEGRSAQIKLTKGFSAKESVKGHMVNVVKGLKLYEDVFTDSELCKLYDFVNEIHSAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKEDAKSNIEPIPALLQSVIDHLIQWKLLPEYKRPNSCIINFFEEGEYSQPFLKPPHLDQPVSILLLPESTMAFGRTLTSDSEGNYKGPLMLSPKNGSLIVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQSQTPIPSGATAMTVWQPGGGGPFGLANASMDMMMPKFGIIRAPMVMLTPMRPMVLSSLKLPRGGGTGVFLPWNVPSRKHAKHLPPRAQKGRLLALPPPVESHSHMEESTSDPTITAEAQA 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1948 530 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 34 504 IPR044842 GO:0003729|GO:0006402|GO:0032451
Lele14g1948 530 SUPERFAMILY Clavaminate synthase-like 205 405 - -
Lele14g1948 530 Gene3D - 198 412 IPR037151 -
Lele14g1948 530 Coils Coil 98 128 - -
Lele14g1948 530 MobiDBLite consensus disorder prediction 112 162 - -
Lele14g1948 530 MobiDBLite consensus disorder prediction 490 530 - -
Lele14g1948 530 MobiDBLite consensus disorder prediction 112 158 - -
Lele14g1948 530 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 309 406 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1948 Lele-ChrLele14 25779852 25783428 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1519 05 9747928 9752708 Lele14g1948 14 25779852 25783428 CCT
Lele14g1948 14 25779852 25783428 Lele15g0390 15 2247464 2250915 hybridization
Lele14g1948 14 25779852 25783428 Lele16g0411 16 2223853 2227426 hybridization