Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1313 ATGGAGGAAGCGCTGGAACTTGCGCGCACCAAGGACACCAAGGAGAGGATGGCCGGGGTGGAGCGTCTTCATCAACTTCTCGAAGCTTCCAGGAAGAGCCTCACTTCATCTGAGGTTACATCCCTCGTCGATGTTTGCTTGGATCTCTTGAAAGACAACAACTTTCGGGTCTCTCAGGGTGCACTTCAATCTTTGGCCTCTGCTGTTGTGCTCTCTGGCGAGCATTTCGAACTTCATTTCAATGCGCTTGTTCCTGCCGTCGTTGATCGCTTAGGGGATGCCAAGCAACCAGTTCGTGACGCTGCCAGAAGACTCTTGCTTACTCTCATGGAGGTACTTATCTTTGATGTCTTATCGTTGCCTCTTGCTCACCCTTCTCTATTACTCCATGTTTCGATAATTCTAGTTGAATTCGAAGTCTGTGGAGAACACAATGCTGTGGCAATATCAGCTTATGGATTCTTATTTTATGGCATAGAACTGTATTGGGTTTCTTCTCCCACAATAATTGTGGAAAGAGCAGGTTCATTTGCCTGGACACATAAAAGCTGGAGAGTAAGAGAGGAGTTTGCACGGACCGTCACCTCTGCAATTGGTCTATTTGCATCTACTGAGCTTACCCTTCAACGGGTTATTCTTCCTCCAATTTTGCAGTTGCTCAATGATCCAAACCCTGGTGTTAGGGAAGCAGCTATTTTGTGCATTGAGGTGGCTATAATATCTTGTTGTCTTATTTTAGTGGAGATGTATGCTCAAGCTGGACCTCAATTTCGTGATGAACTTCAGCGTCACAATCTTCCATCATCTATGGTTAAAGATATTAATGCCAGGCTTGAGGGCATTCAGCCAAAAGTTCGCTCTTCAGATGGTATTGGAAGTGGTTTTATTGCTGGGGAAATTAAGAGTATTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCATCAAGGGAGACATCACTTTTTGGAGGAGAAGGTGATCCCACAGAGAGACCCATTGATCCCGTCAAGGTTTATTCAGAAAAGGAGTTAATTAGGGAAATGGAAAAGATTGCATCAACCCTTGTGCCAGAAAAGGACTGGTCAATTCGAATTGGTGCCATGCAAAGAATTGAAGGTCTTGTTTTGGGAGGTGCTGCTGACTATCCATCTTTCCGGGGACTCTTGAAGCAACTTGTTGGACCTTTAAGTGTGCAATTATCTGATCGAAGATCTAGCATTGTGAAGCAGGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTGATTGCAGAATCTGCAGATAACTGCATAAAAACGATGCTGCGTAACTGTAAAGTTGCTCGCGTGCTTCCTCGTATAGCTGATTGTGCAAAAAATGATCGCAGTGCTGTACTTCGTGCAAGGTGTTGTGAATATGCCCTTTTGATATTAGAACATTGGCCTGATGCTCCAGAAATACATCGATCAGCTGATTTATATGAGGATTTGATAAAGTGTTGTGTATCAGATGCGATGAGTGAGGTTCGGTCAACTGCAAGGATGTGCTATAGAATGTTTGCAAAAACTTGGCCAGAGCGTTCCCGCCGCCTATTTTCATCCTTTGATCCTGTTATTCAAAGGTTGATAAATGAAGAGGATGGAGGAATACATAGGCGGCATGCTTCACCTTCCGTTCGTGATAGAGGTGCAATGCTGTCATTAAGTAGTCAAGCTTCTGCTTCCTCAAGTCTACCTGGATATGGGACTTCTGCTATTGTTGCAATGGATAGAAGTTCAAGTTTATCATCAGGGGCATCTGTTTCTGCTGGTATTACTCAGGCAAAGTCACTTGGTAAAGGTACAGAGCGTAGCTTGGAAAGCGTGCTGCATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGTATGCTCAGAGGTTTGGAATTATCTGATAAACATAATTCATCAGCCCTTCGCTCATCAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTCCCTGCTGCTGTCCCAGCGTCTAATCACTTGACAAACTCTTTGACTACAGAATCAACTGCTTCTGGTGTCAATAAAGGTACTAATAGAAACGGTGGTTTAGGTTTGTCTGATATAATCAATCAAATTCAAGCTTCCAAGGATTCTAGCAAGTTATCATATCATAGTAATGTTACTACGGAACCTTTATCAGCAGTTTCATCATACTCCAGTAGAAGGGCTTCTGAAAGGCTTCAAGATAGAGGCTCTATTGATGACAACAGTGATATTAGGGAGGCTAGGCGGTTTATGAACCCCCACATTGATAGGCAGTATATGGATGCAACATATAAAGACGGAAACTTCAGGGATTCACATAATAGTCATGTGCCTAATTTCCAGAGACCATTGCTGAGGAAAAATGTAGCTGGGCGAATGTCTGTTGGAAGGAGGAGGAGTTTTGATGATAGCCAACTACCTCTTGGAGAGTCGTCCAATTATACAGATGGACCAGCATCTCTTCAAGAAGCCTTGAGTGAAGGACTTAGGTCAGGTTCTGACTGGTCTGCTAGGGTTGCTGCTTTTAATTATCTTCACTCATTGTTACAGCAAGGTCCAAAGGGAATTGAAGAAGTAGTCAGGAATTTTGAGAAGGTGATGAAGCTTTTTTTTCAGCACTTGGATGATCCGCACCATAAAGTTGCGCAGGCTGCTCTTTCAACTCTTGCAGATATTATTCCAGCATGCCGAAAGCCCTTTGAGAATTACATGGAAAGAATTTTACCTCATGTGTTTTCTCGGTTAATTGACCCTAAAGAACTTGTTAGGCAACCAAGCTCAATGACTTTGGAAATTGTTAGCAAAACTTACACTGTAGATTCTCTCTTACCTGCATTGCTCCGCTCACTTGATGAACAGAGGTCTCCAAAAGCAAAGTTGGCTGTTATTGAATACGCAATCAGCTCCTTTAACAAGCATTCAATGAATCCTGAAGGTGCTGCTAATGCGGGCATCTTGAAATTATGGCTTGCCAAATTAGCACCATTGGCGCATGACAAAAATACAAAGCTCAAAGAAGCAGCAATTACATGCATTATATCAGTGTATTCTCACTTTGATTCTACTGCAGTCCTGAATTTCATCCTTAGTTTGTCAGTTGAAGAGCAAAATGTGTTGAGGCGAGCCCTTAAACAATACACTCCTCGCATTGAAGTAGACTTGATAAACTTTTTACAGAGCAAGAGAGATAGGCAGCGCTCTAAGTCTTCCTACGATCCATCTGATGTTGTTGGAACATCCTCAGAAGAGGGTTATGTTGGTGTTTCTAGGAAAGCTCAGTACCTTGGAAGGTATTCTGCAGGTTCCCTTGATAGCGATGGTGGTAGGAAGTGGAGTTCCCAAGACTCGACCCTTGTTAAACCAAGCCTGGGCCAAGCAGCTTCTGGTGAAATTCAGGAATTTTTGAATCAGAATCATGAGACTGATTTTAACAAGGGTAGTCTTGGTTCAAAAACGAAGGATCTTGCATCCACAGTCAATCCAATAAGTCAAATTGTTGGCCATCAAACTAGTCAACTTGTGCAGCTGGACAGTAGCATTAACTTTGAGGGTCTTTCAACTCGTCTGGATGTAAATGGTCTGATGTCTGTAGAACATTCAAATGTTACTGAAAGTTTTGGAGAGGATAAAGAACATCCTTCTGAATTGAACCATAGTCATCACTTCGCTGAAACTATGAATATTAACTCTTTGACTGACACAGGTCCCAGCATTCCTCAAATTCTTCATATGGTATGCAGTGGCGGTGATGGAAGCTCGATTTCAAGCAAGAGGACTGCACTTCAACAGTTGGTTGAAGCTTCTAGAGGAAATGATCATTCTATTTGGACTAAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTACTGGATGATTCAGATTCCTCAACCAGAGAGCTTACTCTATCATTAATAGTTGAAATGCTCAAGAACCAGAAAGATGCCATGGAAGATTCAGTCGAAATTGTAATTGAGAAGTTGCTTCATGTTACTAAGGATATTGACCCCAAGGTCTCAAATACAGCAGAGCACTGCCTGACCATTGCTTTATCTCAATACGATACATTCGGATGTTTGAGTGTTATTGTCCCTTTACTGGTTTCTGAGGATGAGAAAACTCTTGTCACTTGCATAAACTGCTTGACAAAGCTTTTGGCCCGACTCTCTCAGGAGGAATTGATGGCTCAGTTACCTTCATTTTTGCCTGCCCTTTTTGAAGCTTTTGGAAACCAGAGTGCTGATGTTCGCAAGCCAGGACAGGAGTGGCCATTGATGCCACCCAGGAGTAAGAAGACTTGGTGGGTTTGGGTTCAAATGACAGATGTTGTGTTGTGTCCTTGTGTTGAAAATATAAATGACGTTCTTAGTTTGTGTTTGCCTGCCTCGTTAATTACTTGCCATTCTCGGATTTTCAATTCGGTTGTTGCTCTTGCCCATGCCACCGGTAGCCTTATTGATTACGCGTTTCTTGATTTACAAGAATGGGAAGTTGCTTAA 4524 0.4264 MEEALELARTKDTKERMAGVERLHQLLEASRKSLTSSEVTSLVDVCLDLLKDNNFRVSQGALQSLASAVVLSGEHFELHFNALVPAVVDRLGDAKQPVRDAARRLLLTLMEVLIFDVLSLPLAHPSLLLHVSIILVEFEVCGEHNAVAISAYGFLFYGIELYWVSSPTIIVERAGSFAWTHKSWRVREEFARTVTSAIGLFASTELTLQRVILPPILQLLNDPNPGVREAAILCIEVAIISCCLILVEMYAQAGPQFRDELQRHNLPSSMVKDINARLEGIQPKVRSSDGIGSGFIAGEIKSINPKKSSPKAKSSSRETSLFGGEGDPTERPIDPVKVYSEKELIREMEKIASTLVPEKDWSIRIGAMQRIEGLVLGGAADYPSFRGLLKQLVGPLSVQLSDRRSSIVKQVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRSAVLRARCCEYALLILEHWPDAPEIHRSADLYEDLIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPVIQRLINEEDGGIHRRHASPSVRDRGAMLSLSSQASASSSLPGYGTSAIVAMDRSSSLSSGASVSAGITQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLELSDKHNSSALRSSSLDLGVDPPSSRDPPFPAAVPASNHLTNSLTTESTASGVNKGTNRNGGLGLSDIINQIQASKDSSKLSYHSNVTTEPLSAVSSYSSRRASERLQDRGSIDDNSDIREARRFMNPHIDRQYMDATYKDGNFRDSHNSHVPNFQRPLLRKNVAGRMSVGRRRSFDDSQLPLGESSNYTDGPASLQEALSEGLRSGSDWSARVAAFNYLHSLLQQGPKGIEEVVRNFEKVMKLFFQHLDDPHHKVAQAALSTLADIIPACRKPFENYMERILPHVFSRLIDPKELVRQPSSMTLEIVSKTYTVDSLLPALLRSLDEQRSPKAKLAVIEYAISSFNKHSMNPEGAANAGILKLWLAKLAPLAHDKNTKLKEAAITCIISVYSHFDSTAVLNFILSLSVEEQNVLRRALKQYTPRIEVDLINFLQSKRDRQRSKSSYDPSDVVGTSSEEGYVGVSRKAQYLGRYSAGSLDSDGGRKWSSQDSTLVKPSLGQAASGEIQEFLNQNHETDFNKGSLGSKTKDLASTVNPISQIVGHQTSQLVQLDSSINFEGLSTRLDVNGLMSVEHSNVTESFGEDKEHPSELNHSHHFAETMNINSLTDTGPSIPQILHMVCSGGDGSSISSKRTALQQLVEASRGNDHSIWTKYFNQILTVVLEVLDDSDSSTRELTLSLIVEMLKNQKDAMEDSVEIVIEKLLHVTKDIDPKVSNTAEHCLTIALSQYDTFGCLSVIVPLLVSEDEKTLVTCINCLTKLLARLSQEELMAQLPSFLPALFEAFGNQSADVRKPGQEWPLMPPRSKKTWWVWVQMTDVVLCPCVENINDVLSLCLPASLITCHSRIFNSVVALAHATGSLIDYAFLDLQEWEVA 1507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1313 1507 Gene3D - 832 1055 IPR011989 -
Lele05g1313 1507 MobiDBLite consensus disorder prediction 639 653 - -
Lele05g1313 1507 MobiDBLite consensus disorder prediction 804 827 - -
Lele05g1313 1507 Pfam CLASP N terminal 408 536 IPR024395 -
Lele05g1313 1507 Pfam CLASP N terminal 837 1031 IPR024395 -
Lele05g1313 1507 Gene3D - 328 542 IPR011989 -
Lele05g1313 1507 MobiDBLite consensus disorder prediction 813 827 - -
Lele05g1313 1507 SUPERFAMILY ARM repeat 3 1069 IPR016024 -
Lele05g1313 1507 MobiDBLite consensus disorder prediction 669 695 - -
Lele05g1313 1507 ProSiteProfiles HEAT repeat profile. 83 119 IPR021133 -
Lele05g1313 1507 SMART TOG_3 3 287 IPR034085 -
Lele05g1313 1507 SMART TOG_3 815 1064 IPR034085 -
Lele05g1313 1507 SMART TOG_3 1235 1455 IPR034085 -
Lele05g1313 1507 Coils Coil 1315 1335 - -
Lele05g1313 1507 MobiDBLite consensus disorder prediction 639 695 - -
Lele05g1313 1507 Gene3D - 1259 1430 IPR011989 -
Lele05g1313 1507 Pfam HEAT repeat 212 235 IPR000357 GO:0005515
Lele05g1313 1507 Gene3D - 1 284 IPR011989 -
Lele05g1313 1507 MobiDBLite consensus disorder prediction 303 333 - -
Lele05g1313 1507 MobiDBLite consensus disorder prediction 307 322 - -
Lele05g1313 1507 PANTHER CLASP 32 1426 - -
Lele05g1313 1507 SUPERFAMILY ARM repeat 1244 1426 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1313 Lele-ChrLele05 8165395 8177574 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1313 05 8165395 8177574 Lele13g1865 13 26515882 26525983 CCT
Lele05g1313 05 8165395 8177574 Lele15g0543 15 3207733 3217847 CCT
Lele05g1313 05 8165395 8177574 Lele16g0557 16 3139208 3148919 CCT
Lele13g1870 13 26553009 26554461 Lele05g1313 05 8165395 8177574 CCT
Lele14g1810 14 24910225 24911705 Lele05g1313 05 8165395 8177574 CCT
Lele15g0539 15 3180114 3181565 Lele05g1313 05 8165395 8177574 CCT
Lele16g0552 16 3107376 3109009 Lele05g1313 05 8165395 8177574 CCT
Lele05g1313 05 8165395 8177574 Lele05g1313 05 8165395 8177574 ECH
Lele05g1313 05 8165395 8177574 Lele07g1361 07 8218701 8231212 hybridization
Lele05g1313 05 8165395 8177574 Lele08g1165 08 7297479 7308437 hybridization