Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0552 ATGCACTTGCGATGCTTAAGCTACCCATTATTTTTTTTGGTCCAGCTTAAGCTTCCCTATTTAAGGGCCTCAAACTCAAAACAGTATCTTCAATCCTCCAACAAGTCTCAAACTCTTCAATTCTCACACATCTTCACAGAAACCTCACTTACTTGCTTAATCACCAAAATGGATAACTTGTTTCGCCTCTTTGATTCCCAAGACTTGTCCTCTCGCCGATGCATTTGGGTCAATGGCCCTGTGATCGTCGGCGCCGGACCTTCTGGTCTTGCCACAGCTGCATGCCTCAGAGAAGAAGGCGTTCCCTTCATGGTTCTCGAAAGAGCTAACTGTATCGCCTCGCTCTGGCAAAACAGAACCTACGACAGATTGAAGCTTCATCTTCCCAAGCAATTCTGTCAACTTCCTAAACTTCCATTTCCTGAACACTACCCTGAATATCCCACTAAGAGGCAGTTCATCGACTACCTCGAATCTTATGCCAAGAATTTTGATATCAACCCTCGATTCAATGAGTGTGTTCAGTCCGCTAGGTACGATGAGACCAGCGGCTTGTGGCGAGTCAAAACTGTTTCCTCCACCAGCGAGATGGAGTATATTTGCCGGTGGCTGGTGGTGGCCACCGGTGAGAATGCCGAGCGTGTGATGCCTGACATTGAAGGGTTGAACGAATTCAAAGGCGAAATCGTCCACGCTTGTGAGTACAAGTCAGGGGAGAGTTTCAGGGGAAAGAAAGTTCTCGTTGTCGGGTGTGGCAATTCCGGCATGGAGCTCTCACTTGACCTCTGCAACCACAGTGCTTCTCCCTCAATGGTTGTTCGTAGCTCGGTTCATGTACTGCCCAGAGAAGTCTTTGGCAAATCAACGTTCGAATTGGCTGTTCTCATGATGAAATGGATTCCTATTTGGCTCGTGGACAAGATCCTAGTGATCTTGGCATGGTTTGTGCTTGGTAACGTGGAGAAATACGGGCTTAAAAGGCCATCCATGGGTCCATTGGAGCTAAAGAACACACAGGGCAAAACCCCTGTTTTGGACATTGGAACTTTGGAGAAAATAAGATCCGGAGACATTAATGTTGTGCCAGGAATCAAAAGGTTCAACAATAACGAGGTTGAACTAGTTAACCGGGAAAAGATTGACATTGATGCAGTGGTTCTTGCCACAGGATATCGCAGCAACGTTCCTTACTGGCTTCAGGAAGGTGAATTTTTCTCAAAGAATGGATACCCAAAGAGACAATTTCCTCGTGGATGGAAAGGAAATGCAGGGCTTTATGCAGTTGGATTTACCAAGAGAGGGCTCTCAGGAGCTTCATCTGAAGCTGTGAAAATCGCTCAAGATATTGGCAATGTCTGGAAACAAGAGATCGAGCAAATGAAACAGCGTACAACTGCCCACCATAGACGATGCATTTCCACGTTCTAA 1428 0.4636 MHLRCLSYPLFFLVQLKLPYLRASNSKQYLQSSNKSQTLQFSHIFTETSLTCLITKMDNLFRLFDSQDLSSRRCIWVNGPVIVGAGPSGLATAACLREEGVPFMVLERANCIASLWQNRTYDRLKLHLPKQFCQLPKLPFPEHYPEYPTKRQFIDYLESYAKNFDINPRFNECVQSARYDETSGLWRVKTVSSTSEMEYICRWLVVATGENAERVMPDIEGLNEFKGEIVHACEYKSGESFRGKKVLVVGCGNSGMELSLDLCNHSASPSMVVRSSVHVLPREVFGKSTFELAVLMMKWIPIWLVDKILVILAWFVLGNVEKYGLKRPSMGPLELKNTQGKTPVLDIGTLEKIRSGDINVVPGIKRFNNNEVELVNREKIDIDAVVLATGYRSNVPYWLQEGEFFSKNGYPKRQFPRGWKGNAGLYAVGFTKRGLSGASSEAVKIAQDIGNVWKQEIEQMKQRTTAHHRRCISTF 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0552 475 FunFam Flavin-containing monooxygenase 80 458 - -
Lele16g0552 475 Gene3D - 80 459 IPR036188 -
Lele16g0552 475 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 81 469 - -
Lele16g0552 475 PRINTS Pyridine nucleotide disulphide reductase class-II signature 79 101 - -
Lele16g0552 475 PRINTS Pyridine nucleotide disulphide reductase class-II signature 241 265 - -
Lele16g0552 475 PRINTS FAD-dependent pyridine nucleotide reductase signature 80 99 - -
Lele16g0552 475 PRINTS FAD-dependent pyridine nucleotide reductase signature 245 263 - -
Lele16g0552 475 SUPERFAMILY FAD/NAD(P)-binding domain 81 323 IPR036188 -
Lele16g0552 475 Pfam Flavin-binding monooxygenase-like 82 398 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lele16g0552 475 SUPERFAMILY FAD/NAD(P)-binding domain 243 451 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0552 Lele-ChrLele16 3107376 3109009 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g0552 16 3107376 3109009 Lele05g1313 05 8165395 8177574 CCT
Lele16g0552 16 3107376 3109009 Lele06g1173 06 7301296 7312210 CCT
Lele16g0552 16 3107376 3109009 Lele07g1361 07 8218701 8231212 CCT
Lele16g0552 16 3107376 3109009 Lele08g1165 08 7297479 7308437 CCT
Lele13g1870 13 26553009 26554461 Lele16g0552 16 3107376 3109009 hybridization
Lele14g1810 14 24910225 24911705 Lele16g0552 16 3107376 3109009 hybridization