Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1865 ATGGAGCAAGTGCTGGAGCTTTCACGCTCCAAGGACACTAAGGAGAGGATGGCCGGCGTGGAGCGCCTATATCAACTGTTGGAAGCTTCGAGAAAGAGCCTCACTTCATCTGAGGTTACTTCCCTCGTTGACTGTTGCTTGGATCTTTTGAAAGATAACAACTTCAGGGTCTCTCAGGGCGCCCTTCAAGCTTTGGCCTCTGCCGTCGTTCTATCCGGCGATCATTTCAAACTTCATTTCGATGCGCTTGTTCCCGCCGTCGTTGAACGCTTAGGCGATGGTAAACAGCCCGTTCGTGACGCCGCCAGAAGACTCTTGCTCACTCTTATGGAGGTTTCTTCCCCTACAATAATTGTTGAAAGAGCAGGATTCTTTGCTTGGACACACAGAAGCTGGAGAATTAGGGAGGAGTTTGCTCGAACTGTCACTTCTGCTATTGGTCTATTTGCATCTACTGAGCTTACCCTTCAACGTGCTATTCTTCCTTCAGTTTTGCAGTTGCTAAACGATCCAAATCCTGGTGTAAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATGCACAAGCTGGTCCTCAATTTCGCGATGAACTTCACCGCCACAACCTCCCTTCTTCTTTGGTGAAAGATATTAATGCTAGGCTAGAGGGCATTCAACCAAAAGTACATTCTTCTGACAACATACCCAGTGGCTATGTTGCTGGAGAAATTAAACCTTCAAGCTTTAATTCCAAGAAAAGCAGCCCAAAAACTAAAATTTCATCAAGGGAAAACTCTATTTTTGCAGGAAATGGTGACGTCACAGAGAAGCCCATAGATTCTATCAAGGTGTACTCAGAGAAGGAGTTAATAAGAGAAATTGATAAGATTGCATCTACCCTTGTACCAGAAAAGGACTGGTCAATTCGTATTGCTGCTATGCAGAGAGTTGAAGGTCTTGTTTTGGGAGGTGCTGCTTACTATCCATGTTTTCGAGGACTCCTGAAGCAACTTGTTGGACCTTTAACAACTCAATTATCAGATCGAAGGTCTAGCATTGTAAAGCAGGCTTGCCATTTATTGTGCTTTTTGTCACAAGAACTCCTAGGTGATTTTGAACCTTGTGCTGAAATGTTCATGCCTGTCCTTTTTAAGCTGGTTGTGATCACTGTACTGGTAATTGCAGAGTCTGCGGATAACTGCATAAAGACGATGTTGCGTAACTGCAAAGTTGCCCGAGTGCTTCCTTGTATAGCTGATTGTGCAAAAAAGGATCGCAGTGCAGTACTTCGTGCTAGGTGTTGTGAATATGCTCTTTTGATATTGGAGCAATGGCCTGATGAACCAGAAATACAGCGATGGGCTGATGTATATGAGGATCTGATAAGATGTTGTGCTTCAGATGCAATGAGTGAGGTACGGTCTACTGCAAGGATGTGTTATAGACTATTTGCAAAGACATGGCCTGAACGTTCCCGTCGTCTATTTTCATCCTTTGATCAAGTTATTCAGAGGTTAATAAATGAAGAGGATGGAGGAGTGCATAAGCGCCATGCTTCACCTTCCATTCGTGACAGAGGTTCACTGGTGTCATCAACTAGCCACATCCCTGCTCCTTCTAATCTACCTGGATATGGAACTTCTGCCATTGTTGCAATGGACAGGAGTTCAAGTTTATCATCAGGGACATCTGTCTCTTCTGGTTTACTTCTTTCACAGGCAAAATCACTTGGTAAAGGTGCAGAACGAAGTTTGGAAAGCGTCTTGCATTCTAGCAAACAGAAGGTCACTGCCATTGAAAGCATGCTGAGAGGCTTGGATTTGTCAAAGAGGCATAATCCTGCTCTCCGGTCATCCAGTTTGGATCTAGGAGTTGACCCTCCAGCATCTCGTGATCCACCATTCCCTGCTGCTGTCCCAGCATCTAATAATCTGACAAACTCTTTTACAACAGAATCAATTGTATCTGGTGTCAATAAAGGTAGTAACCGAAATGGTGGCTTGGGTCTGTCTGACATAATTTCACAAATTCAAGCTTCCAAAAACTCCAGTAAGGTATCATATAATAGTAATGCTAGTATTGAGCCTTCGCCAGCACTTTCATCATACTCAAGTAAAAGGGCTTCTGAAAGATTACAAGAAAGAAATTCCATTGATGATAATGGCAATAATAGGGAGACTAGGTGGGCTAGGAACCACCGCATTGATAGGCAGTATTTGGATGCTCCTTATAGAGAAGCAAATTTTAGGGATTTACAGAATAGTTATGTGCCTAATTTCCAGAGGCCACTTGTGAGAAAGAATGTATCCGGGCTTGTCTCTGCTGGCCGGAGGAGAAGTTTTGATGATAATCAACTTTCTCTTGGAGAGGTGTCAAATTATGCAGATGGACCAGTATCTCTCCCTGAAGCTCTTAGTGAAGGGCTTAGTTCAGGTTCTAACTGGTCTGCTAGGGTTGCTGCTTTTAATTATCTTCAGACCTTGTTACAGCAAGGTCCAAAGGGAATTCAGGAAGTGGTCCAGAATTTTGAAAAGGTAATGAAGTTGTTTTTTCAACACTTGGATGATCCTCACCATAAAGTTGCACAAGCTGCTCTTTCAACACTTGCGGATATTGTTCCAGCATGCCGAAAGCCCTTTGAGAGCTATATGGAAAGAATATTACCCCATGTGTTTTCTCGGTTAATTGACCCAAAAGAACTTGTCAGGCAAACATGCTCAATGACATTGGAAGTTGTTAGCAAAACTTACGGTATAGATTCCCTTTTACCTGCATTACTACGTTCACTTGATGAACAAAGATCTCCTAAGGCAAAATTGGCTGTTATTGAGTTTGCAATCTGTTCCTTCAACAAGCACTCGCTGAATCCAGAAGGTGCTGCCAATACTGGCATTCTGAAATCGTGGCTTACCAAGTTAACTCCTTTGGTTCAGGACAAAAATACAAAGCTTAGAGAAGCAGCCATTACGTGCATTATATCCGTGTACTCTCACTTTGATTCAGCTGCACTTCTAAATTTTATACTTAGTTTGTCAGTTGAAGAACAAAATTCATTGAGACGAGCCCTTAAACAATATACTCCTCGCATTGAAGTGGACCTAATAAACTATTTGCAGAGGAAGAAGGAGCGACAACGCTCTAAGTCTTCATATGATCTATCTGAGGTTGGAACATCCTCTGAAGATGGATACGTTGGTTTCTCTAGGAAAGCTAACTACCTTGGAAGGTATTCTGCCGGTTCTCTTGATGGAGATGGTTGTAGGAAGTGGAGTTCCCATGATTCAACTCTAGTTAAAGTCAGTTTTTGCCAAGCAGCTTCTAGTGAAAATCAGGAACATTTATATCAAAATCATGAAACTAATACTACTTGTGCTATTGTTGGTTCAAAGACTAAAGATCTTGTTTATGCAGTCAATTCAATGGGCCAAAACTTTGACTCTAATAATAGTCAGCTCGGACGTTCAGATGGTAACATGGACTTTGAGGGTCTATCAACTCCTCATCTGGATGTTAATGGTCGGATGTCCTTAGAACATTTAAATTTAAATGTAGGCTTTGGACATGAACATGATCCTCCTGAATTGAGCCTTGATCATCACTCAACTGAAGCTGTGAAGAATAACGCAAAAGATTCAGAGCCTGGCATTGATCAAATTCTTCATCTGATATGCAGCGGGGGTGATGGAAGTCCTATTTCCAGCAAGCGAACTGCACTTCAACAGTTAATTGAAGTTTCTGCAGAAAATGATCGTTCTATTTGGACAAAGTACTTCAATCAGATTCTGACAGTTGTGCTTGAAGTGTTGGATGATTCTGACTCCCCAGTTAGAGAGCTTGCTCTCTCAGTTGTAGCTGAAATGTTAAAAAACCAGAAAGATGCCATGGAAGAGTCAGTTGAGATTTTAATCCAAAAGCTGCTTCATGTTACAAAGGATACTGTTCCCAAGGTCTCAAATGAAGCTGATCACTGCCTGACTATTGTCTTGTCTCAGTGTGATCCATTCAGATGTTTAAGTGTTATTGTCCCTTTACTGGTTACTGAAGATGAGAAAAATCTTGTTACTTGCATAAATTGCTTGACGAAGCTTATTGGTCAGCTTTCTCAGGAGGAATTGATGGCTCAGTTACCCTCCTTTCTGCCTCCTCTTTTTGATGCTTTTGGAAACCAGAGTGCAGATGTTCGCAAGACGGTTGTGTTCTGTCTGGTGGATATATACATCATGCTCGGGAAAGCATTCTTGCCATACCTCCAAGGTCTTAATAGCACGCAGTTGAAGTTGGTCACCATTTATGCAAATCGAATCTCCCAGGCCAGGACAGGCACGGCAATCGACGCCACTCAATGA 4326 0.4242 MEQVLELSRSKDTKERMAGVERLYQLLEASRKSLTSSEVTSLVDCCLDLLKDNNFRVSQGALQALASAVVLSGDHFKLHFDALVPAVVERLGDGKQPVRDAARRLLLTLMEVSSPTIIVERAGFFAWTHRSWRIREEFARTVTSAIGLFASTELTLQRAILPSVLQLLNDPNPGVREAAILCIEEMYAQAGPQFRDELHRHNLPSSLVKDINARLEGIQPKVHSSDNIPSGYVAGEIKPSSFNSKKSSPKTKISSRENSIFAGNGDVTEKPIDSIKVYSEKELIREIDKIASTLVPEKDWSIRIAAMQRVEGLVLGGAAYYPCFRGLLKQLVGPLTTQLSDRRSSIVKQACHLLCFLSQELLGDFEPCAEMFMPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPCIADCAKKDRSAVLRARCCEYALLILEQWPDEPEIQRWADVYEDLIRCCASDAMSEVRSTARMCYRLFAKTWPERSRRLFSSFDQVIQRLINEEDGGVHKRHASPSIRDRGSLVSSTSHIPAPSNLPGYGTSAIVAMDRSSSLSSGTSVSSGLLLSQAKSLGKGAERSLESVLHSSKQKVTAIESMLRGLDLSKRHNPALRSSSLDLGVDPPASRDPPFPAAVPASNNLTNSFTTESIVSGVNKGSNRNGGLGLSDIISQIQASKNSSKVSYNSNASIEPSPALSSYSSKRASERLQERNSIDDNGNNRETRWARNHRIDRQYLDAPYREANFRDLQNSYVPNFQRPLVRKNVSGLVSAGRRRSFDDNQLSLGEVSNYADGPVSLPEALSEGLSSGSNWSARVAAFNYLQTLLQQGPKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPACRKPFESYMERILPHVFSRLIDPKELVRQTCSMTLEVVSKTYGIDSLLPALLRSLDEQRSPKAKLAVIEFAICSFNKHSLNPEGAANTGILKSWLTKLTPLVQDKNTKLREAAITCIISVYSHFDSAALLNFILSLSVEEQNSLRRALKQYTPRIEVDLINYLQRKKERQRSKSSYDLSEVGTSSEDGYVGFSRKANYLGRYSAGSLDGDGCRKWSSHDSTLVKVSFCQAASSENQEHLYQNHETNTTCAIVGSKTKDLVYAVNSMGQNFDSNNSQLGRSDGNMDFEGLSTPHLDVNGRMSLEHLNLNVGFGHEHDPPELSLDHHSTEAVKNNAKDSEPGIDQILHLICSGGDGSPISSKRTALQQLIEVSAENDRSIWTKYFNQILTVVLEVLDDSDSPVRELALSVVAEMLKNQKDAMEESVEILIQKLLHVTKDTVPKVSNEADHCLTIVLSQCDPFRCLSVIVPLLVTEDEKNLVTCINCLTKLIGQLSQEELMAQLPSFLPPLFDAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGTAIDATQ 1441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1865 1441 MobiDBLite consensus disorder prediction 701 718 - -
Lele13g1865 1441 MobiDBLite consensus disorder prediction 507 528 - -
Lele13g1865 1441 SMART TOG_3 3 224 IPR034085 -
Lele13g1865 1441 SMART TOG_3 282 513 IPR034085 -
Lele13g1865 1441 SMART TOG_3 1196 1434 IPR034085 -
Lele13g1865 1441 SMART TOG_3 780 1029 IPR034085 -
Lele13g1865 1441 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Lele13g1865 1441 Pfam CLASP N terminal 285 500 IPR024395 -
Lele13g1865 1441 Pfam CLASP N terminal 804 996 IPR024395 -
Lele13g1865 1441 SUPERFAMILY ARM repeat 288 1432 IPR016024 -
Lele13g1865 1441 SUPERFAMILY ARM repeat 3 400 IPR016024 -
Lele13g1865 1441 MobiDBLite consensus disorder prediction 674 718 - -
Lele13g1865 1441 PANTHER CLASP 32 1428 - -
Lele13g1865 1441 Gene3D - 797 1020 IPR011989 -
Lele13g1865 1441 MobiDBLite consensus disorder prediction 611 636 - -
Lele13g1865 1441 FunFam Protein peg1 266 513 - -
Lele13g1865 1441 MobiDBLite consensus disorder prediction 674 700 - -
Lele13g1865 1441 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Lele13g1865 1441 Gene3D - 267 507 IPR011989 -
Lele13g1865 1441 Gene3D - 1225 1433 IPR011989 -
Lele13g1865 1441 Gene3D - 1 224 IPR011989 -
Lele13g1865 1441 Coils Coil 1278 1298 - -
Lele13g1865 1441 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1865 Lele-ChrLele13 26515882 26525983 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1313 05 8165395 8177574 Lele13g1865 13 26515882 26525983 CCT
Lele13g1865 13 26515882 26525983 Lele15g0543 15 3207733 3217847 hybridization
Lele13g1865 13 26515882 26525983 Lele16g0557 16 3139208 3148919 hybridization