Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1165 ATGGAGGAAGCGCTGGAACTTGCGCGCACTAAGGACACCAAGGAGAGGATGGCTGGGGTGGAGCGCCTTCATCAACTTCTGGAAGCTTCCAGAAAGAGCCTCACTTCATCTGAGGTTACATCCCTCGTCGATGTTTGCTTGGATCTCTTGAAAGACAACAACTTTCGAGTCTCTCAGGGTGCACTTCAATCTTTGGCCTCTGCTGCTGTGCTCTCTGGCGAGCATTTCAAACTTCATTTCAATGCGCTTGTTCCTGCCGTCGTTGATCGCTTAGGGGATGCCAAACAACCAGTTCGTGACGCCGCCAGAAGACTCTTGCTTACTCTAATGGAGGTGTCTTCTCCCACAATAATTGTAGAAAGAGCTGGTTCCTTTGCCTGGACACATAAAAGCTGGAGAGTCAGAGAGGAGTTTGCACGGACTGTCACGTCTGCAATTGGTCTATTTGCATCTACTGAGCTTACCCTTCAACGGGTTATTCTTCCGCCAATTTTGCAGTTGCTCAATGATCCAAACCCTGGTGTTAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATGCTCAAGCTGGACCTCAATTTCGTGATGAACTTCAGCGTTACAATCTTCCATCATCTATGGTTAAAGATATTAATGCCAGGCTTGAGGGCATTCAGCCAAAAGTTCGCTCTTCAGATGGTATTGGAAGTGGTTTTATTGCTGGGGAGATTAAGCCTTTGAGTGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCATCAAGGGAGACATCGCTTTTTGGAGGAGAAGGTGATCCCACAGAGAGACCCATGGATCCCGTCAAGGTTTATTCAGAAAAGGAGTTAATCAGGGAAATTGAAAAGATTGCATCAACCCTTGTGCCAGAAAAGGACTGGTCAATTCGAATTGGTGCCATGCAAAGAATTGAAGGTCTTGTTTTGGGAGGCGCTGCTGACTATCCATCTTTCCGGGGACTCTTGAAGCAACTTGTTGGACCTTTAAGTGTGCAATTATCAGATAGAAGATCTAGCATTGTGAAGCAGGCTTGCCATCTATTATGCTTTTTGTCAAAGGAACTCTTGGGTGATTTCGAACAATGTGCTGAAATGTTCATACCGGTCCTTTTCAAGCTGGTTGTGATTACTGTACTTGTGATTGCAGAGTCTGCAGATAACTGCATAAAAACGATGCTGCGTAATTGTAAAGTTGCTCGTGTGCTTCCTCGTATAGCTGATTGTGCAAAAAATGATCGCAGTGCTATACTTCGTGCAAGGTGTTGTGAATATGCTCTTTTGATATTAGAACATTGGCCTGATGCTCCAGAAATACATCGATCAGCTGATTTATATGAGGATTTGATAAAGTGTTGTGTATCAGATGCAATGAGTGAGGTTCGGTCAACTGCAAGGATGTGCTATAGAATGTTTGCAAAAACTTGGCCAGAGCGTTCCCGCCGCCTATTTTCATCCTTTGATCCTGTTATTCAAAGGTTGATAAATGAAGAGGATGGAGGAATACATAGGCGGCATGCCTCGCCTTCTGTTCGTGATAGAGGTGCATTGCTGTCGTTAAGTAATCAAGCCTCTGCTCCCTCAAGTCTACCTGGATATGGGACTTCTGCTATTGTTGCAATGGATAGGAGTTCAAGTTTATCATCAGGGGCATCTGTTTCTGTTGGTATTACTCAAGCAAAGTCACTTGGCAAAGGTACAGAGCGTAGCTTGGAAAGCGTGTTGCATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGTATGCTCAGAGGTCTGGATTTATCTGATAAGCATAATTCATCAGCCCTCCGCTCATCAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTCCCTGCTGCTGTCCCAGCATCTAATCACTTGACAAACTCTTTGCCTACAGAATCAACTGCTTCTGGTGTCAATAAAGGTACTAATCGAAATGGTGGTTTAGGTTTGTCTGATATAATCACTCAAATTCAAGCTTCCAAAGATTCTAGCAAGTTATCATATCATAGTAATGTTACTACCGAGCCTTTATCAGCACTTTCATCATACTCCAGTAGAAGGGCTTCTGAAAGGCTTCAAGATAGAAGCTCTATTGATGACAACAGTGACATTAGGGAGGCTAGGCGGTTTATGAACCCCCACGTTGATAGGCAGTATATGGATGCAATTTATAAAGATGGAAACTCAAGGGATTCACATAATAGTCATGTGCCTAATTTCCAGAGACCATTGCTGAGGAAAAATGTAGCTGGGCGAATGTCTGTTGGAAGGAGGAGGAGTTTTGATGATAGCCAACTACCCCTTGGAGAGTCATCCAATTATACAGATGGACCAGTATCTCTTCATGAAGCCTTGAGTGAAGGACTTAGTTCAGGTTCTGACTGGTCTGCTAGGGTTGCTGCTTTTAATTATCTTCACTCATTGTTACAGCAAGGTCCAAAGGGAATTCAAGAAGTAGTCCAGAATTTTGAGAAGGTAATGAAGCTTTTTTTTCAGCACTTGGATGATCCACACCATAAAGTTGCACAGGCTTCTCTTTCAACACTTGCAGATATTATTCCAGCATGCAGAAAGCCCTTTGAGAGTTACATGGAAAGAATATTACCTCATGTGTTTTCTCGATTAATTGACCCTAAAGAACTTGTTAGGCAACCAAGCTCAATGACTTTGGAAGTTGTTAGCAAAACTTACAGTGTAGATTCTCTCTTACCTGCATTGCTCCGCTCACTTGATGAACAGAGGTCTCCAAAAGCAAAGTTGGCTGTTATTGAATACGCAATCAGCTCCTTTAACAAGCATTCAATGAATCCTGAAGGTGCTGCTAATGCTGGCATCCTGAAATTATGGCTTGCCAAATTAGCACCATTGGCTCATGACAAAAATACAAAGCTCAAAGAAGCAGCAATTACATGCATTATATCAGTGTATTCTCACTTTGATTCTACTGCAGTCCTGAATTTCATCCTTAGTCTGTCAGTTGAAGAGCAAAATGTGTTGAGGCGAGCCCTTAAACAATACACTCCTCGCATTGAAGTAGACTTGATAAACTTTTTACAGAGCAAGAAAGATAGGCAGCGCTCTAAGTCTTCCTATGATCCATCTGATGTTGTTGGAACATCCTCAGAAGAGGGGTATGTTGGTGTTTCTAGGAAAGCTCACTACCTTGGAAGGTATTCTGCTGGTTCCCTTGATAGTGATGGTGGTAGGAAGTGGAGTTCCCAAGACTCGACCCTTGTTAAACCCAGCCTTGGCCAAGCAGCTTCTGGTGAAATTCAGGAATTTTTACATCAGAATCATGAGACTGATTTTAATAAGGGTAGTCTTGGTTCAAAAACTAAGGATCTTGCATCCACAGTCAATCCAATAAGCGAAAATGTTGGCCATCAAACTAGTCAACTTGGGCATCTGGACAGTAGCATTAACTTTGAGGGTCTTTCAACTCCTCGTCTGGATGTGAATGGTCTGATGTCTGTAGAAAATTCAGATGTTACTGAAAATTTTGGTGAGGATAAAGAACATCCTTCTGTATTGGACCATAATCATCACTTCGCTGAAACTATGAATATTAATTCTTTGACCGACACAGGTCCCAGCATTCCTCAAATTCTTCATATGGTATGCAGTGGCGGTGATGGAAGCTCAGTTTCAAGCAAGAGGACTGCACTTCAGCAGTTGGTTGAAGCTTCTAGAGCAAATGATCATTCTATTTGGACTAAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAATCAGAGAGCTTACTCTATCATTAATAGTTGAAATGCTCAAGAACCAGAAAGATGCCATGGAAGATTCAGTCGAAATTGTAATTGAGAAGTTGCTTCATGTTACTAAGGATATTGATCCCAAGGTCTCAAATACAGCAGAGCACTGCCTGACCATTGTTTTATCTCAATATGATCCATTCAGATGTTTGAGTGTTATTGTCCCTTTACTGGTTTCTGAGGATGAGAAAACTCTTGTCACTTGCATAAACTGCTTGACAAAGCTTTCGTGCCGACTCTCTCAGGAGGAATTGATGGCTCAGTTACCTTCATTTTTGCCGGCGCTTTTTGAAGCTTTTGGAAACCAGAGTGCTGATGTTCGCAAGACGGTTGTGTTCTGTCTGGTGGATATATATATAATGCTGGGGAAAGCATTCTTGCCATACTTGCAAGGGCTTAACAGCACACAGTTGAAGTTGGTCACCATTTATGCAAATCGAATTTCTCAAGCCAGGACAGGAGTGGCCATTGATGCCACCCAGGAGTAA 4335 0.4272 MEEALELARTKDTKERMAGVERLHQLLEASRKSLTSSEVTSLVDVCLDLLKDNNFRVSQGALQSLASAAVLSGEHFKLHFNALVPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTHKSWRVREEFARTVTSAIGLFASTELTLQRVILPPILQLLNDPNPGVREAAILCIEEMYAQAGPQFRDELQRYNLPSSMVKDINARLEGIQPKVRSSDGIGSGFIAGEIKPLSVNPKKSSPKAKSSSRETSLFGGEGDPTERPMDPVKVYSEKELIREIEKIASTLVPEKDWSIRIGAMQRIEGLVLGGAADYPSFRGLLKQLVGPLSVQLSDRRSSIVKQACHLLCFLSKELLGDFEQCAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRSAILRARCCEYALLILEHWPDAPEIHRSADLYEDLIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPVIQRLINEEDGGIHRRHASPSVRDRGALLSLSNQASAPSSLPGYGTSAIVAMDRSSSLSSGASVSVGITQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLDLSDKHNSSALRSSSLDLGVDPPSSRDPPFPAAVPASNHLTNSLPTESTASGVNKGTNRNGGLGLSDIITQIQASKDSSKLSYHSNVTTEPLSALSSYSSRRASERLQDRSSIDDNSDIREARRFMNPHVDRQYMDAIYKDGNSRDSHNSHVPNFQRPLLRKNVAGRMSVGRRRSFDDSQLPLGESSNYTDGPVSLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGPKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQASLSTLADIIPACRKPFESYMERILPHVFSRLIDPKELVRQPSSMTLEVVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEYAISSFNKHSMNPEGAANAGILKLWLAKLAPLAHDKNTKLKEAAITCIISVYSHFDSTAVLNFILSLSVEEQNVLRRALKQYTPRIEVDLINFLQSKKDRQRSKSSYDPSDVVGTSSEEGYVGVSRKAHYLGRYSAGSLDSDGGRKWSSQDSTLVKPSLGQAASGEIQEFLHQNHETDFNKGSLGSKTKDLASTVNPISENVGHQTSQLGHLDSSINFEGLSTPRLDVNGLMSVENSDVTENFGEDKEHPSVLDHNHHFAETMNINSLTDTGPSIPQILHMVCSGGDGSSVSSKRTALQQLVEASRANDHSIWTKYFNQILTVVLEVLDDSDSSIRELTLSLIVEMLKNQKDAMEDSVEIVIEKLLHVTKDIDPKVSNTAEHCLTIVLSQYDPFRCLSVIVPLLVSEDEKTLVTCINCLTKLSCRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGVAIDATQE 1444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1165 1444 FunFam Protein peg1 266 513 - -
Lele08g1165 1444 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Lele08g1165 1444 MobiDBLite consensus disorder prediction 603 617 - -
Lele08g1165 1444 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Lele08g1165 1444 Coils Coil 1280 1300 - -
Lele08g1165 1444 Gene3D - 1 221 IPR011989 -
Lele08g1165 1444 Gene3D - 1225 1434 IPR011989 -
Lele08g1165 1444 MobiDBLite consensus disorder prediction 246 261 - -
Lele08g1165 1444 MobiDBLite consensus disorder prediction 603 657 - -
Lele08g1165 1444 PANTHER CLASP 32 1430 - -
Lele08g1165 1444 MobiDBLite consensus disorder prediction 243 274 - -
Lele08g1165 1444 Gene3D - 795 1019 IPR011989 -
Lele08g1165 1444 Pfam CLASP N terminal 802 995 IPR024395 -
Lele08g1165 1444 Pfam CLASP N terminal 284 500 IPR024395 -
Lele08g1165 1444 SMART TOG_3 1200 1436 IPR034085 -
Lele08g1165 1444 SMART TOG_3 270 514 IPR034085 -
Lele08g1165 1444 SMART TOG_3 785 1028 IPR034085 -
Lele08g1165 1444 SMART TOG_3 3 224 IPR034085 -
Lele08g1165 1444 MobiDBLite consensus disorder prediction 633 657 - -
Lele08g1165 1444 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Lele08g1165 1444 Gene3D - 267 506 IPR011989 -
Lele08g1165 1444 SUPERFAMILY ARM repeat 289 1434 IPR016024 -
Lele08g1165 1444 SUPERFAMILY ARM repeat 5 402 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1165 Lele-ChrLele08 7297479 7308437 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1870 13 26553009 26554461 Lele08g1165 08 7297479 7308437 CCT
Lele14g1810 14 24910225 24911705 Lele08g1165 08 7297479 7308437 CCT
Lele15g0539 15 3180114 3181565 Lele08g1165 08 7297479 7308437 CCT
Lele16g0552 16 3107376 3109009 Lele08g1165 08 7297479 7308437 CCT
Lele08g1165 08 7297479 7308437 Lele08g1165 08 7297479 7308437 ECH
Lele05g1313 05 8165395 8177574 Lele08g1165 08 7297479 7308437 hybridization
Lele06g1173 06 7301296 7312210 Lele08g1165 08 7297479 7308437 hybridization