Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0539 ATGGAAAACTTGTTGCGCCTCTTTGATTCCCAAGACTCGTCCTCTCGCCGATGCATTTGGGTCAATGGTCCTGTGATCGTCGGTGCCGGACCATCTGGTCTCGCCGCTGCCGCATGTCTCAGAGAACAAGGCGTTCCCTTCATGGTTCTCGAAAGAGCTGATTGCATCGCCTCGCTCTGGCAACACAGAACCTACGACAGATTGAAGCTTCATCTTCCCAAGCAATTCTGTCAACTTCCTAAACTTCCATTTCCTGAACACTACCCTGAATATCCCACTAAGAGGCAGTTCATCGACTACCTCGAATCTTATGCCAAGCATTTCGATATCAACCCTCGATTCAATGAGTGTGTTCAGTCCGCTAGGTACGATGAGACCAGCGGCCTGTGGCGGGTCAAGACCGTATCCTCCGATGGCGAGATGGAGTATATTTGCCGATGGCTGGTGGTGGCCACCGGTGAGAATGCCGAGCGTGTGATGCCTGACATTGAAGGGTTATCCGAATTCAAAGGCGAAATCGTACACTCTTGTGAGTACAAGTCAGGGGAGAGTTTCAGGGGAAAGAAAGTGCTCGTCGTCGGGGGTGGCAATTCCGGCATGGAGCTCTCACTTGACCTCTGCAACCACAGTGCTTCTCCCTCAATGGTTGTTCGTAGCTCGGTTCACGTACTGCCTAGAGAAGTCTTTGGCAAATCAACGTTCGAATTGGCTGTTCTCATGATGCAATGGCTACCTCTCTGGCTGGTGGACAAGATTATAGTGATCTTGGCATGGTTTGTGCTGGGTAACGTGGAGAAGTACGGGCTTAAAAGGCCATCCATGGGTCCATTGGAGCTAAAGAACACACAGGGCAAAACCCCTGTTCTGGACGTCGGAACTTTGGAGAAAATAAGATCCGGAGACATTAATGTTGTGCCAGGAATCAAAAGGTTCAACAATAAAGAGGTTGAACTCTTCAACGGGGAAAAGCTTGACATTGATGCCGTGGTTCTTGCCACAGGATATCGCAGCAACGTTCCTTACTGGCTTCAGGAAGGTGAATTTTTCTCAAAGAACGGATACCCAAAGACACCATTTCCTCATGGATGGAAAGGAAATGCAGGGCTTTATGCAGTTGGATTCACAAAGAGAGGGCTATCAGGAGCGTCATCAGATGCAGTGAAAATTGCTCAAGATATTGGTAATGTCTGGAAACAAGAGATCAAGCAGGTGAAACAGCGTACAACTGCCCGCCATAGACGATGCATTTCCACGTTCTAA 1260 0.4897 MENLLRLFDSQDSSSRRCIWVNGPVIVGAGPSGLAAAACLREQGVPFMVLERADCIASLWQHRTYDRLKLHLPKQFCQLPKLPFPEHYPEYPTKRQFIDYLESYAKHFDINPRFNECVQSARYDETSGLWRVKTVSSDGEMEYICRWLVVATGENAERVMPDIEGLSEFKGEIVHSCEYKSGESFRGKKVLVVGGGNSGMELSLDLCNHSASPSMVVRSSVHVLPREVFGKSTFELAVLMMQWLPLWLVDKIIVILAWFVLGNVEKYGLKRPSMGPLELKNTQGKTPVLDVGTLEKIRSGDINVVPGIKRFNNKEVELFNGEKLDIDAVVLATGYRSNVPYWLQEGEFFSKNGYPKTPFPHGWKGNAGLYAVGFTKRGLSGASSDAVKIAQDIGNVWKQEIKQVKQRTTARHRRCISTF 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0539 419 SUPERFAMILY FAD/NAD(P)-binding domain 187 395 IPR036188 -
Lele15g0539 419 Pfam Flavin-binding monooxygenase-like 26 342 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lele15g0539 419 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 25 411 - -
Lele15g0539 419 SUPERFAMILY FAD/NAD(P)-binding domain 25 226 IPR036188 -
Lele15g0539 419 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Lele15g0539 419 PRINTS Pyridine nucleotide disulphide reductase class-II signature 185 209 - -
Lele15g0539 419 FunFam Flavin-containing monooxygenase 24 402 - -
Lele15g0539 419 Gene3D - 24 403 IPR036188 -
Lele15g0539 419 PRINTS FAD-dependent pyridine nucleotide reductase signature 189 207 - -
Lele15g0539 419 PRINTS FAD-dependent pyridine nucleotide reductase signature 145 163 - -
Lele15g0539 419 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0539 Lele-ChrLele15 3180114 3181565 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g0539 15 3180114 3181565 Lele05g1313 05 8165395 8177574 CCT
Lele15g0539 15 3180114 3181565 Lele06g1173 06 7301296 7312210 CCT
Lele15g0539 15 3180114 3181565 Lele07g1361 07 8218701 8231212 CCT
Lele15g0539 15 3180114 3181565 Lele08g1165 08 7297479 7308437 CCT
Lele13g1870 13 26553009 26554461 Lele15g0539 15 3180114 3181565 hybridization
Lele14g1810 14 24910225 24911705 Lele15g0539 15 3180114 3181565 hybridization