Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1361 ATGGAGGAAGCGCTGGAACTTGCGCGCACAAAGGACACCAAGGAGAGGATGGCCGGGGTGGAGCGCCTTCATCAACTTCTGGAAGCTTCCAGGAAGAGCCTCACTTCATCTGAGGTTACATCCCTCGTCGATGTTTGCTTGGATCTCTTGAAAGACAACAACTTTCGGGTCTCTCAGGGTGCACTTCAATCTTTGGCCTCTGCTGCTGTGCTCTCTGGCGAGCATTTCAAACTTCATTTCAATGCGCTTGTTCCTGCCGTCGTTGATCGCTTAGGGGATGCCAAGCAACCAGTTCGTGACGCTGCCAGAAGACTCTTGCTTACTCTCATGGAGGTTTCTTCTCCCACAATAATTGTGGAAAGAGCTGGTTCCTTTGCCTGGACGCATAAAAGCTGGAGAGTCAGAGGGGAGTTTGCACGGACCGTCACCTCTGCAATTGGTCTATTTGCATCTACTGAGCTTACCCTTCAACGGGTTATTCTTCCTCCAATTTTGCAGTTGCTCAATGATCCAAACCCTGGTGTTAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATGCTCAAGCTGGACCTCAATTTCGTGATGAACTTCAGCGTCACAATCTTCCATCATCTATGGTTAAAGATATTAATGCCAGGCTTGAGGGCATTCAGCCAAAAGTTCGCTCTTCAGATGGTATTGGAAGTGGTTTTATAGCTGGGGAAATTAAGAGTGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCATCAAGGGAGACATCACTTTTTGGAGGAGAAGGTGATCCCACAGAGAGACCCATTGATCCCGTCAAGGTTTATTCAGAAAAGGAATTAATCAGGGAAATGGAAAAGATCGCATCAACCCTTGTGCCAGAAAAGGACTGGTCAATTCGAATTGGTGCCATGCAAAGAATTGAAGGTCTTGTTTTGGGAGGTGCTGCTGACTATCCATCTTTCCGGGGACTCTTGAAGCAACTTGTTGGACCTTTAAGTGTGCAATTATCTGATCGAAGATCTAGCATTGTGAAGCAGGCTTGCCATCTATTATGCTTTTTGTCAAAGGAACTCTTGGGTGATTTTGAACAATGTGCTGAAATGTTCATACCGGTCCTTTTCAAGCTGGTTGTGATTACTGTACTTGTGATTGCAGAATCTGCAGATAACTGCATAAAAACGATGCTGCGTAATTGTAAAGTTGCTCGTGTGCTTCCTCGTATAGCTGATTGTGCAAAAAGTGATCGCAGTGCTGTACTTCGTGCAAGGTGTTGTGAATATGCTCTTTTGATATTAGAACATTGGCCTGATGCTCCAGAAATACATCGATCAGCTGATTTATATGAGGATTTGATAAAGTGTTGTGTATCAGATGCAATGAGTGAGGTTCGGTCAACAGCAAGGATGTGCTATAGAATGTTTGCAAAAACTTGGCCAGAGCGTTCCCGCCGCATATTTTCATCCTTTGATCCTGTTATTCAAAGGTTGATAAATGAAGAGGATGGAGGAGTACATAGGCGGCATGCTTCACCTTCCATTCGAGATAGAGGTGCAGTGCTGTCATTAAGTAGTCAAGCCTCTGCTCCCTCAAGTCTACCTGGATATGGGACTTCTGCTATTGTTGCAATGGATAGAAGTTCAAGTTTATCATCAGGGGCATCTGTTTCTGCCAGTATTACTCAGGCAAAGTCACTTGGTAAAGGTACAGAGCGTAGCTTGGAAAGTGTGCTGCATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGTATGCTCAGAGGTTTGGATTTATCTGATAAGCATAATTCATCAGCCCTTCGCTCATCAAGTTTGGATCTAGGAGTTGACCCTCCATCGTCTCGTGATCCACCATTCCCTGCTGCTGTCCCAGCATCTAATTACTTGACAAACTCTTTGACTACAGAATCAACTGCTTCTGGTATCAATAAAGGTACTAATCGAAACGGTGGTTTAGGTTTGTCTGATATAATCACTCAAATTCAAGCTTCCAAAGATTCTAGCAAGTTATCATATCATAGTAATGTTACTACGGAACCTTTATCAGCACTTTCATCATACTCCAGTAGAAGGGCTTCTGAAAGGCTTCAAGATAGAGGCTCTGTTGATGACAACAGTGATATTAGGGAGGCTAGGCGGTTTATGAACCCCCACATTGATAGGCAGTATATGGATGCAACATATAAAGACGGAAACTTTAGGGATTCACATAATAGTCATGTGCCTAATTTCCAGAGACCATTGCTGAGGAAAAATGTAGCTGGGCGAATGTCTGTTGGAAGGAGGAGGAGTTTTGATGATAGCCAACTACCTCTTGGAGAGTCGTCCAATTATACAGATGGACCAGCATCTCTTCATGAAGCCTTGAGTGAAGGACTTAGGTCAGGTTCTGACTGGTCTGCTAGGGTTGCTGCTTTTAATTATCTTCATTCATTGTTACAGCAAGGTCCAAAGGGAATTCAAGAAGTAGTCCAGAATTTTGAGAAGGTAATGAAGCTTTTTTTTGAGCACTTGGATGATCCGCACCATAAAGTTGCACAGGCTGCTCTTTCAACTCTTGCAGATATTATTCCAGCATGCCGAAAGCCCTTTGAGAGTTACATGGAAAGAATATTACCTCATGTGTTTTCTCGGTTAATTGACCCTAAAGAACTTGTTAGGCAACCAAGCTCAATGACTTTGGAAATTGTTAGCAAAACTTACAGTGTAGATTCTCTCTTACCTGCATTGCTCCGCTCACTTGATGAACAGAGGTCTCCAAAAGCAAAGTTGGCTGTTATTGAATACGCAATCAGCTCCTTTAACAAGCATTCAATGAATCCTGAAGGTGCTGCTAATGCTGGCATCCTGAAATTATGGCTTGCCAAATTAGCACCATTGGCTCATGACAAAAATACAAAGCTCAAAGAAGCAGCAATTACATGCATTATATCAGTGTATTCTCACTTTGATTCTACTGCAGTCCTGAATTTCATCCTTAGTTTGTCAGTTGAAGAGCAAAATGTGTTGAGGCGAGCCCTTAAACAATACACTCCTCGCATTGAAGTAGACTTGATAAACTTTTTACAGAGCAAGAAAGATAGGCAGCACTCTAAGTCTTCCTATGATCCATCTGATGTTGTTGGAACATCCTCAGAAGAGGGTTATGTTGGTGTATCTAGGAAAGCTCAGTACCTTGGAAGGTATTCTGCTGGTTCCCTTGATAGCGATGGTGGTAGGAAGTGGAGTTCCCAAGACTCGACCCTTGTTAAACCGAGCCTGGGCCAAGCAGCTTCTGGTGAAATTCAGGAATTTTTGCATCAGAATCATGAGACTGATTTTAACAAGGGTAGTCTTGGTTCAAAAACGAAGGATCTTGCATCCACAGTCAAGCCAATAAGCCAAAATGTTGGCCACCAAACTAGTCAACTTGGGCATCTGGACAGTAGCATTAACTTTGAGGGTCTTTCAACTCCTCGTCTGGATGTAAATGATCTGATGTCTGTAGAACATTCAAATGTTACTGAAAGTTTTGGAGAGGATAAAGAACATCCTTCAGAATTGAACCATAGTCATCACTTCGCTGAAACTATGAATATTAACTCTTTGACTGACACAGGTCCCAGCATTCCTCAAATTCTTCATATGGTATGCAGTGGCGGTGATGGAAGCTCGGTTTCAAGCAAGAGGACTGCACTTCAACAGTTGGTTGAGGCTTCTAGAGGAAATGATCATTCTATTTGGACTAAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAATCAGAGAGCTTACTCTATCATTAATAGTTGAAATGCTCAAGAACCAGAAAGATGCCATGGAAGACTCAGTCGAAATTGTAATTGAGAAGTTGCTTCATGTTACTAAGGATATTGATCCCAAGGTCTCAAATACAGCAGAGCACTGCCTGACCATTGCTTTATCTCAATATGATCCATTCGGATGTTTGAGTGTTATTGTCCCTTTACTGGTTTCTGAGGATGAGAAAACTCTTGTCACTTGCATAAACTGCTTGACAAAGCTTTTGGGCCGACTCTCTCAGGAGGAATTGATGGCTCAGCTACCTTCATTTTTGCCTGCCCTTTTTGAAGCTTTTGGAAACCAGAGTGCTGATGTTCGCAAGACGGTTGTATTCTGTCTGGTGGATATATATATAATGCTGGGGAAAGAATTCTTGCCATACTTGCAAGGGCTTAACAGCACACAGTTGAAGTTGGTCACGATTTATGCAAATCGAATTTCACAAGCCAGGACAGGAGTGGCCATTGATGCCACCCAGGAGTAA 4329 0.4294 MEEALELARTKDTKERMAGVERLHQLLEASRKSLTSSEVTSLVDVCLDLLKDNNFRVSQGALQSLASAAVLSGEHFKLHFNALVPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTHKSWRVRGEFARTVTSAIGLFASTELTLQRVILPPILQLLNDPNPGVREAAILCIEEMYAQAGPQFRDELQRHNLPSSMVKDINARLEGIQPKVRSSDGIGSGFIAGEIKSVNPKKSSPKAKSSSRETSLFGGEGDPTERPIDPVKVYSEKELIREMEKIASTLVPEKDWSIRIGAMQRIEGLVLGGAADYPSFRGLLKQLVGPLSVQLSDRRSSIVKQACHLLCFLSKELLGDFEQCAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKSDRSAVLRARCCEYALLILEHWPDAPEIHRSADLYEDLIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRIFSSFDPVIQRLINEEDGGVHRRHASPSIRDRGAVLSLSSQASAPSSLPGYGTSAIVAMDRSSSLSSGASVSASITQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLDLSDKHNSSALRSSSLDLGVDPPSSRDPPFPAAVPASNYLTNSLTTESTASGINKGTNRNGGLGLSDIITQIQASKDSSKLSYHSNVTTEPLSALSSYSSRRASERLQDRGSVDDNSDIREARRFMNPHIDRQYMDATYKDGNFRDSHNSHVPNFQRPLLRKNVAGRMSVGRRRSFDDSQLPLGESSNYTDGPASLHEALSEGLRSGSDWSARVAAFNYLHSLLQQGPKGIQEVVQNFEKVMKLFFEHLDDPHHKVAQAALSTLADIIPACRKPFESYMERILPHVFSRLIDPKELVRQPSSMTLEIVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEYAISSFNKHSMNPEGAANAGILKLWLAKLAPLAHDKNTKLKEAAITCIISVYSHFDSTAVLNFILSLSVEEQNVLRRALKQYTPRIEVDLINFLQSKKDRQHSKSSYDPSDVVGTSSEEGYVGVSRKAQYLGRYSAGSLDSDGGRKWSSQDSTLVKPSLGQAASGEIQEFLHQNHETDFNKGSLGSKTKDLASTVKPISQNVGHQTSQLGHLDSSINFEGLSTPRLDVNDLMSVEHSNVTESFGEDKEHPSELNHSHHFAETMNINSLTDTGPSIPQILHMVCSGGDGSSVSSKRTALQQLVEASRGNDHSIWTKYFNQILTVVLEVLDDSDSSIRELTLSLIVEMLKNQKDAMEDSVEIVIEKLLHVTKDIDPKVSNTAEHCLTIALSQYDPFGCLSVIVPLLVSEDEKTLVTCINCLTKLLGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKEFLPYLQGLNSTQLKLVTIYANRISQARTGVAIDATQE 1442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1361 1442 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Lele07g1361 1442 Gene3D - 265 504 IPR011989 -
Lele07g1361 1442 SMART TOG_3 1198 1434 IPR034085 -
Lele07g1361 1442 SMART TOG_3 280 511 IPR034085 -
Lele07g1361 1442 SMART TOG_3 3 224 IPR034085 -
Lele07g1361 1442 SMART TOG_3 777 1026 IPR034085 -
Lele07g1361 1442 MobiDBLite consensus disorder prediction 601 629 - -
Lele07g1361 1442 SUPERFAMILY ARM repeat 5 400 IPR016024 -
Lele07g1361 1442 Gene3D - 795 1017 IPR011989 -
Lele07g1361 1442 SUPERFAMILY ARM repeat 288 1432 IPR016024 -
Lele07g1361 1442 Gene3D - 1223 1432 IPR011989 -
Lele07g1361 1442 Gene3D - 1 221 IPR011989 -
Lele07g1361 1442 PANTHER CLASP 32 1428 - -
Lele07g1361 1442 MobiDBLite consensus disorder prediction 766 787 - -
Lele07g1361 1442 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Lele07g1361 1442 MobiDBLite consensus disorder prediction 239 270 - -
Lele07g1361 1442 MobiDBLite consensus disorder prediction 601 615 - -
Lele07g1361 1442 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Lele07g1361 1442 Coils Coil 1278 1298 - -
Lele07g1361 1442 MobiDBLite consensus disorder prediction 244 259 - -
Lele07g1361 1442 FunFam Protein peg1 264 511 - -
Lele07g1361 1442 Pfam CLASP N terminal 799 993 IPR024395 -
Lele07g1361 1442 Pfam CLASP N terminal 282 498 IPR024395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1361 Lele-ChrLele07 8218701 8231212 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1870 13 26553009 26554461 Lele07g1361 07 8218701 8231212 CCT
Lele14g1810 14 24910225 24911705 Lele07g1361 07 8218701 8231212 CCT
Lele15g0539 15 3180114 3181565 Lele07g1361 07 8218701 8231212 CCT
Lele16g0552 16 3107376 3109009 Lele07g1361 07 8218701 8231212 CCT
Lele07g1361 07 8218701 8231212 Lele07g1361 07 8218701 8231212 ECH
Lele05g1313 05 8165395 8177574 Lele07g1361 07 8218701 8231212 hybridization
Lele06g1173 06 7301296 7312210 Lele07g1361 07 8218701 8231212 hybridization