Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0557 ATGGAGCTAGTGCTGGAGCTTGCGCGCTCCAAGGACACTAAGGAGAGGATGGCTGGCGTGGAGCGCCTTTATCAATTATTGGAAGCTTCGAGAAAGAGCCTCACTTCATCTGATGTTACTTCCCTCGTTGACTGTTGCTTGGATCTTCTGAAAGATAACAACTTCAGGGTCTCTCAGGGCGCCCTTCAAGCTTTGGCCTCTGCCGCCGTTTTATCCGGCGATCATTTTAAACTTCATTTCGATGCGCTTGTTCCCGCCGTCGTTTACCGTTTAGGCGATGGCAAACAGCCCGTTCGTGACGCCGCCAGAAGACTCTTGCTCACTCTTATGGAGGTACTTATCTTTGATGTATCATCATCGTTTCCTGTTTACTCCCTCACTGGATGGCATATGGATTATTCTGTATCTCAGGTTTCTTCCCCTACAATTATTGTTGAAAGAGCAGGATTCTTTGCTTGGACACACAGAAACTGGAGAATTAGGGAGGAGTTTGCTCGAACTGTCACATCTGCTATTGGTCTATTTGCATCTACTGAGCTTACCCTTCAACGTGCTATTCTTCCTTCAGTTTTGCAGTTGCTAAATGATCCAAATCCTGGTGTTAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATGCACAAGATGGTCCTCAATTTCGTGATGAACTTCAGCACCACAACCTTCCTTCATCTTTGGTGAACGATATTAATGCTAGGCTAGAGGGCATTCAACCAAAAGTACATTCTTCTGATGGCATACCCGGTGGCTTTGTTGCTGGAGAAATTAAACCTTCAACTTTTACTTCCAAGAAAAGCAGCCCAAAAACTAAAAGTTCGTCAAGGGAAAACTCTGTTTTTGCAGGAAATGGTGATGTCACAGAGAAGCCCATAGATTCTATTAAGGTGTACTCAGAGAAGGAGTTAATAAGAGAAATTGATAAGATTGCATCTACCCTTGTACCAGAAAAGGACTGGTCAATTCGTATTGCTGCTATGCAGAGAGTTGAAGGTCTTGTTTTGGGAGGTGCTGCTGACTATCTGTGTTTTCGAGGACTTCTGAAGCAACTGGTTGGACCTTTAACCAGTCAATTATCAGATCGAAGGTCTAGCATTGTGAAGCAGGCTTGTCATTTATTGTGCCTTTTGTCACAAGAACTCCTAGGTGATTTTGAAGCTTGTGCTGAAATGTTCATACCTGTCCTTTTTAAGCTGGTTGTGATCACTGTACTGGTAGTTGCAGAGTCTGCGGATAACTGCATAAAGACGATGTTGCGTAACAGCAAAGTTCCCCGAGTGCTTCCTCGTATAGCTGATTGTGCAAAAAAGGATCGCAGTGCAGTACTTCGCGCAAGGTGTTGTGAATATGCTCTTCTGATATTGGAGCAATGGCCTGATGAACCAGAAATACAGCGATCGGCTGATGCATATGAGGATCTGATAAGGTGTTGTGTTTCAGATGCAATGAGTGAGGTACGGTCTACTGCAAGGATGTGTTATAGACTATTTGCAAAGACATGGCCTGAACGTTGCCGTCGCCTATTTTCATCCTTTGATCCAGTTATTCAGAGGGTATATCCTTCAGATCAGTTAATAAATGAAGAGGATGGAGGAGTACATAAGCGCCATGCTTCACCTTCCATTTGTGACAGAGGTCCCCTGGTGTCATCAACTAGCCAAGCCTCTGCTCCTTCTTATCTACCTGGATATGGAACTTCTGCTATTGTTGCAATGGACAGGAGTTCAAGTTTATCATCAGGGACATCTGTCTCCTCTGGTTTACTTCTTTCACAGGCAAAATCACTTGGTAAAGGTGCAGAACAAAGTTTGGAAAGCGTGTTGCATTCTAGCAAACAGAAGGTGTCAGCCATTGAAAGCATGCTTAGAGGCTTGGATTTGTCTAAGAGGCATAATCCTGCTCTCCAGTCATCCAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTCCCTGCTGCTGTCCCAGCATCTAATAATCTTACAAACTCTTTTACAACAGAATCAATTGTATCTTCTGGGGTCAATAAAGGTAGTAACCGAAATGGTGGCTTGGGTCTGTCTGACATAATTTCACAAATTCAAGCTTCTAAAAACTCCAGTAAGGTATCATATAATAGTAATGCTAGTATTGAGCCTTCGCCAGCACTTTCATCATACTCAAGTAAAAGGGCTTCTGAAAGATTACAAGAAAGAAATTCCGTTGATGACAATGGCAATAGGGAGGCTAGGTGGGTTATGAACCACCGCATTGATAGGCAGTATTTGGATGCTCTTTTTAGAGAAGCAAACTTTAGGGATTCACAGAATAGTTATGTGCCTAATTTCCAGAGGCCGCTAGTGAGAAAGAACATAGCTGGACGTATCTCTGCTGGCCGGAGGAGAAGTTTTGATGATAACCAACTTTCTCTTGGAGAGGTGTCAAATTATGCAGATGGACCAGTATCTCTCCCTGAAGCTCTGAGTGAAGGGCTTAGTTCAGATTCTAACTGGTCTGCTAGGGTTGCTGCTTTTAATTATCTTCACACCTTGTTACAGCAAGGTCCAAAGGGAATGCAGGAAGTGGTCCAGAATTTTGAAAAGGTAATGAAGTTGTTTTTTCAGCACTTGGATGATCCTCACCATAAAGTTGCACAAGCTGCTCTTTCAACACTTGCGGATATTGTTCCAGTATGCCGAAAGCCCTTTGAGAGTTACATGGAAAGAATATTACCCCATGTGTTTTCTCGGTTAATTGACCCAAAAGAACTTGTCAGGCAAACATGCTCAATGACATTGGAAGTTGTTAGCAAAACTTACAGTATAGATTCCCTTTTACCCGCATTACTACGTTCACTTGATGAACAAAGGTCTCCTAAGGCAAAATTGGCTGTTATTGAGTTTGCAATCAGTTCCTTCAACAAGCACTCACTGAATCCAGAAGGTGCTGCCAATACTGGCATTCTAAAATCATGGCTTACCAAGTTAACTCCTTTGGTTCATGACAAAAATACAAAGCTTAGAGAAGCAGCCATTACGTGCATTATATCAGTGTACTCTCACTTTGATTCAGCTGCACTTCTAAATTTTATCCTTACTTTGTCAGTTGAAGAACAATATTCATTGAGACGGGCCCTTAAACAACATACTCCTCGCATTGAAGTGGACCTAATAAACTATTTGCAGAGCAAGAAGGAGCGACAACGCTTCAAGTCTTCATATGATCCATCTGAGGTTGGAACATCCTCTGAAGATGGATATGTTGGTTTCTCTAGGAAAGCTAACTACCTTGGAAGGTATTCTGCTGGTTCTCTTGATGGTGATGGTGGTAGGAAGTGGAGTTCCCATGATTCAACTCTAGTTAAAGCCAGTTTTGGCCAAGCAGCTTCTAGTGAAAATCAGGAACATGCATATCAAAATCGTGAAACTGATTCTACTAGTGTTATTCTTGGTTCAAAGACTAAAGATCTTGTTTTTGCAGTCAATTCAATGGGCCAAAACTTTGGCTCTCATAATAGTCAACTTGGACATTCAGATGGTAGCATGGACTTTGAGGGTCTATCAACTCCTCTTCTGGATGTTAATGGTCGGATGTCCTTAGAACATTTAAATTTAAATGTGGGCTTTGGACATGAAAAGGATCCTCCTGAATTGGGCCTTGATCATCATTCAACTGAAGCTGTGAAGAATAACTCAAAAGATTCAGAGCCTGGCATTGCTCAAATTCTTCATCTGATATGCGGCGGGGGTGATGGAAGTCCTATTTCAAGCAAGCTAACTGCACTTCAACAGTTAATTGAAGTTTCTGCCGAAAATGATCGTTCTGTTTGGACCAAGTACTTCAATCAGATTCTGACAGCTGTGCTTGAAGTGTTGGATGATTCTGACTCCACAGTTAGAGAGCTTGCTCTCTCAGTTGTGGCTGAAATGTTAAAAAACCAGAAAGATGCCATGGAAGAGTCAGTTGAGATTGTAATTGAAAAGCTGCTTCATGTTACGAAGGATACTGTTCCCAAGGTCTCAAATGAAGCTGATCACTGCCAGACTATTGTTTTGTCTCAGTGTGATCCATTTAGATGTTTAAGTGTTATTGTCCCTTTACTGGTTACCGAAGATGAGAAAAATCTTGTTACTTGCATAAATTGCTTGACGAAGCTTATTGGTCGGCTTTCTCAGGAGGAATTGATGGCTCAGTTACCCTCCTTTCTGCCTCCCCTTTTTGATGCTTTTGGAAACCAGAGTGCAGATGTTCGCAAGACAGTTGTGTTCTGTCTGGTGGATATATACATCATGCTTGGGAAAGCATTCTTGCCATACCTCCAAGGTCTTGATAGCACGCAGTTGAAGTTGGTCGCCATTTATGCAAATCGAATCTCACAGGCCAGAACAGGCACGCCAATTGACGCCACTCAATGA 4422 0.4261 MELVLELARSKDTKERMAGVERLYQLLEASRKSLTSSDVTSLVDCCLDLLKDNNFRVSQGALQALASAAVLSGDHFKLHFDALVPAVVYRLGDGKQPVRDAARRLLLTLMEVLIFDVSSSFPVYSLTGWHMDYSVSQVSSPTIIVERAGFFAWTHRNWRIREEFARTVTSAIGLFASTELTLQRAILPSVLQLLNDPNPGVREAAILCIEEMYAQDGPQFRDELQHHNLPSSLVNDINARLEGIQPKVHSSDGIPGGFVAGEIKPSTFTSKKSSPKTKSSSRENSVFAGNGDVTEKPIDSIKVYSEKELIREIDKIASTLVPEKDWSIRIAAMQRVEGLVLGGAADYLCFRGLLKQLVGPLTSQLSDRRSSIVKQACHLLCLLSQELLGDFEACAEMFIPVLFKLVVITVLVVAESADNCIKTMLRNSKVPRVLPRIADCAKKDRSAVLRARCCEYALLILEQWPDEPEIQRSADAYEDLIRCCVSDAMSEVRSTARMCYRLFAKTWPERCRRLFSSFDPVIQRVYPSDQLINEEDGGVHKRHASPSICDRGPLVSSTSQASAPSYLPGYGTSAIVAMDRSSSLSSGTSVSSGLLLSQAKSLGKGAEQSLESVLHSSKQKVSAIESMLRGLDLSKRHNPALQSSSLDLGVDPPSSRDPPFPAAVPASNNLTNSFTTESIVSSGVNKGSNRNGGLGLSDIISQIQASKNSSKVSYNSNASIEPSPALSSYSSKRASERLQERNSVDDNGNREARWVMNHRIDRQYLDALFREANFRDSQNSYVPNFQRPLVRKNIAGRISAGRRRSFDDNQLSLGEVSNYADGPVSLPEALSEGLSSDSNWSARVAAFNYLHTLLQQGPKGMQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPVCRKPFESYMERILPHVFSRLIDPKELVRQTCSMTLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHSLNPEGAANTGILKSWLTKLTPLVHDKNTKLREAAITCIISVYSHFDSAALLNFILTLSVEEQYSLRRALKQHTPRIEVDLINYLQSKKERQRFKSSYDPSEVGTSSEDGYVGFSRKANYLGRYSAGSLDGDGGRKWSSHDSTLVKASFGQAASSENQEHAYQNRETDSTSVILGSKTKDLVFAVNSMGQNFGSHNSQLGHSDGSMDFEGLSTPLLDVNGRMSLEHLNLNVGFGHEKDPPELGLDHHSTEAVKNNSKDSEPGIAQILHLICGGGDGSPISSKLTALQQLIEVSAENDRSVWTKYFNQILTAVLEVLDDSDSTVRELALSVVAEMLKNQKDAMEESVEIVIEKLLHVTKDTVPKVSNEADHCQTIVLSQCDPFRCLSVIVPLLVTEDEKNLVTCINCLTKLIGRLSQEELMAQLPSFLPPLFDAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLDSTQLKLVAIYANRISQARTGTPIDATQ 1473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0557 1473 MobiDBLite consensus disorder prediction 707 745 - -
Lele16g0557 1473 MobiDBLite consensus disorder prediction 265 291 - -
Lele16g0557 1473 Pfam HEAT repeat 186 212 IPR000357 GO:0005515
Lele16g0557 1473 SUPERFAMILY ARM repeat 1230 1445 IPR016024 -
Lele16g0557 1473 FunFam Protein peg1 292 543 - -
Lele16g0557 1473 SUPERFAMILY ARM repeat 3 1047 IPR016024 -
Lele16g0557 1473 MobiDBLite consensus disorder prediction 266 288 - -
Lele16g0557 1473 PANTHER CLASP 32 1460 - -
Lele16g0557 1473 Gene3D - 829 1053 IPR011989 -
Lele16g0557 1473 MobiDBLite consensus disorder prediction 642 668 - -
Lele16g0557 1473 Gene3D - 1257 1465 IPR011989 -
Lele16g0557 1473 Gene3D - 1 249 IPR011989 -
Lele16g0557 1473 SMART TOG_3 1228 1466 IPR034085 -
Lele16g0557 1473 SMART TOG_3 2 250 IPR034085 -
Lele16g0557 1473 SMART TOG_3 812 1057 IPR034085 -
Lele16g0557 1473 SMART TOG_3 308 545 IPR034085 -
Lele16g0557 1473 MobiDBLite consensus disorder prediction 707 733 - -
Lele16g0557 1473 ProSiteProfiles HEAT repeat profile. 186 224 IPR021133 -
Lele16g0557 1473 Pfam CLASP N terminal 833 1028 IPR024395 -
Lele16g0557 1473 Pfam CLASP N terminal 311 524 IPR024395 -
Lele16g0557 1473 Gene3D - 293 529 IPR011989 -
Lele16g0557 1473 Coils Coil 1310 1330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0557 Lele-ChrLele16 3139208 3148919 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1313 05 8165395 8177574 Lele16g0557 16 3139208 3148919 CCT
Lele13g1865 13 26515882 26525983 Lele16g0557 16 3139208 3148919 hybridization