Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0862 ATGTCTCCACCCTGGCCTATCACCACTACTCGATCAATCTCCCAAGGCCCGCCAACTCATTCCACGCCGGCCGTCAATATCAATAATCTCAATACATTGGATTGGCTCAGAAATAATGGAGAATATTTGGTTTTGATCGTTTTTTATGGAACGTGGAAGCATGCGAAGGAGATGGTGAAGGCCAGCGAGGAGTTCCTTTCCAAGTTCGCTACTAGGGTTTGTTTGGAGATCGATGTAAAAGTGAGTGGTGGAAGTATATACGAATCCGAATTTATCTTGAGGAAGGAACGTTTTTCCGGGTGCGTGAGTACAATGGAGTCTTTGGCCAGAGCTTTGAGAGTGATTGAGCCAAATGGGTTAGAGATTGAGAACAATTTAATTGAGATTTTGAGGGAAATGGTGAAGCTCCTGGCTAGTTATTTGAAGCCAATGAAGCCAAGGCCAAAACTGATGAATAAGGTCAAGGGAAAGGAGAAGCAAATGGAAAAGAATGAGTTCTGTATAATCGATTACTTGAAGAGGATTGTAGGACCTGTCTGGAGAATGTATGGGACAATGCATGCTGCTTTAGAAATGGTGAAGATAGATTGA 591 0.4298 MSPPWPITTTRSISQGPPTHSTPAVNINNLNTLDWLRNNGEYLVLIVFYGTWKHAKEMVKASEEFLSKFATRVCLEIDVKVSGGSIYESEFILRKERFSGCVSTMESLARALRVIEPNGLEIENNLIEILREMVKLLASYLKPMKPRPKLMNKVKGKEKQMEKNEFCIIDYLKRIVGPVWRMYGTMHAALEMVKID 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0862 196 MobiDBLite consensus disorder prediction 1 21 - -
Lele05g0862 196 Pfam DTW domain 38 136 IPR005636 -
Lele05g0862 196 PANTHER UNCHARACTERIZED 39 141 IPR039262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0862 Lele-ChrLele05 5285960 5286875 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0862 05 5285960 5286875 Lele13g1497 13 24301455 24310499 CCT
Lele05g0862 05 5285960 5286875 Lele14g1421 14 22690480 22699409 CCT
Lele05g0862 05 5285960 5286875 Lele15g0927 15 5415367 5424436 CCT
Lele05g0862 05 5285960 5286875 Lele16g0950 16 5374733 5383766 CCT
Lele13g1490 13 24248543 24261554 Lele05g0862 05 5285960 5286875 CCT
Lele14g1413 14 22644594 22647677 Lele05g0862 05 5285960 5286875 CCT
Lele15g0936 15 5465158 5467893 Lele05g0862 05 5285960 5286875 CCT
Lele16g0960 16 5430923 5433991 Lele05g0862 05 5285960 5286875 CCT
Lele05g0862 05 5285960 5286875 Lele07g0904 07 5357631 5360837 hybridization
Lele05g0862 05 5285960 5286875 Lele08g0717 08 4449121 4449903 hybridization