Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1421 ATGTCTAGCTCTACGAAGGTTTTGGATCCTGGATTCCAGGCAGTGGGTCAGAAAGTAGGGACTGAAATATGGAGGATTGAGAATTTCCAGCCAGTACCGTTGCCTAAATCTGAGTATGGAAAGTTCTACATGGGAGATTCGTACATTATCCTGCAGACAACACAAGGCAAAGGAGGGGCTTATTTCTATGATATACACTTCTGGCTTGGAAAGGATACGAGTCAGGACGAGGCAGGGGCAGCTGCCATCAAAGCTGTCGAACTTGATGCAGCTCTTGGAGGACGTGCGGTGCAGCATAGGGAAGTCCAAGGCCATGAATCTGACAAATTTTTGTCATACTTTAAACCATGTATAATACCACTAGAGGGAGGTGTTGCATCTGGGTTTAAAAAACCTGAAGAAGAAGTGTTTGAAACACGGTTGTACATATGCAAAGGAAAACGAGTTGTCCCTTTTGCCCGGTCTTCTCTGAATCATGATGATGTATTTATCCTTGACACTCAGAACAAGATTTATCAATTCAATGGGGCAAATTCAAATATTCAGGAAAGAGCCAAGGCTTTGGAAGTAACCCAGTTTTTAAAGGAAAAATATCATGAGGGGAAATGTGACGTTGCAATTGTTGATGATGGAAAGTTGGACACTGAATCAGATTCAGGTGAATTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTGGGAAGAAGGTCATTGGTGAGGATGATATTATTCCAGAGACTACTCCAGCTCAACTTTATTGTATTGCTGATGGTGAGGTCAAACCAGTTGAAGGTGAACTGTCTAAATCGCTGTTGGACAATAGCAAATGCTATTTACTGGACTGTGGTGCAGAGGTGTTTGTCTGGGTTGGCCGGGTAACACAAGTTGAAGAACGAAAAGCAGCATGCCAAGCCGCAGAGGAGTTTGTTGCAAGTCAAAATAGGCCAAGATCGACCCGGATAACCAGAATTATTCAAGGTTATGAGACACATGCGTTCAAGTCCAACTTTGATACTTGGCCATCAGGATCTGCTACTACTGGTGCTGAGGAAGGGAGAGGAAAAGTTGCAGCTTTGCTGAAGCAACAAGGTATGGGTGTCAAGGGGATGACAAAAAGTACGCCAGTCAATGAAGAAATTCCACCTCTGCTTGAAGGAGGTGGAAAGATGGAGGTATGGCTAATCAATGGAAGTGCCAAGAATCCATTGCCTAAGGATGATATTGGAAAATTTTACAGTGGAGATTGTTACATCGTATTGTACACTTACCACTCTGGTGAGAGGAAGGAAGACTACTTCTTGTGTTGTTGGTTTGGTAAAGATAGCGTTGAGGAAGACCAAACGATGGCTACTCGATTGGCTAATACTATGTCCAACTCACTAAAGGGTAGACCTGTTCAGGGCCGCATATTTGAAGGTAAAGAGCCACCACAATTTGTTGCTCTCTTTCAGCATATGGTGGTCCTTAAGGGAGGCTTGAGTTCTGGTTACAAAAAGTTAATGGCAGAGAAAGGTTTGCCAGATGAGACTTACACAGCAGAAAGTATTGCACTTATTCGAATTTCTGGAACTTCAATTCATAATAATAAAGCAGTGCAAGTCGATGCAGTAGGAACATCATTAAATTCTACTGAGTGTTTCCTGCTGCAATCTGGCTCATCACTTTTCATTTGGCATGGAAGTCAATGTTCTTTTGAACAGCAGCAGCTGGCAGCTAAAGTTGCTGAGTTTTTGAAGTCAGGAGTTGCGATAAAATATGCTAAGGAAGGGACAGAAAGTTCAGCCTTTTGGTTTGCACTTGGAGGAAAACAGAGCTTCACCAGCAAAAAAGCCACTAATGAAACTGTTAGGGATCCACATTTGTTCACATTTTCATTAAGCAAAGGAAAGTTTCAGGTAGAAGAGGTTTACAACTTTTCCCAAGATGATCTGTTGACTGAGGATATCCTCATACTTGACACACATGCTGAAGTATTTGTTTGGGTTGGTCAGTCTGTGGATTCAAAAGAAAAACAAAATGCTTTTGAAATTGGTCAGAAATATATAGAGAGGGCTGCAGCTCTAGAGGGACTCTCCCCTTATGTACCACTGTATAAAGTTACAGAAGGCAACGAACCTTGCTTTTTGACAACATACTTTTCATGGGATCATGCAAAAGCTACTGCACAAGGAAACTCATTCCAGAAAAAGGTGTCATTACTTTTTGGGATTGGCCATTCTGTGGAGGATAAGTCCAATGGATCCAGTCAAGGAGCAGGACCTAGACAAAGAGCAGAAGCTTTAGCTGCCTTATCTTCTGCATTTAATTCACCTTCGGAGAAAACAGACAGCATGGATAGAGATAGACTGAACGGAGTAAATCAAGGAGGTCCAAGACAAAGAGCTGAAGCTTTAGCTGCCTTGAACTCTGCATTTAATTCATCATCCCCAAGTAGAACTGTTGTTCCCAGGCCTGCTGGAACAAGTCAAGGATCACAAAGATCAGCAGCTGTAGCTGCTCTTTCAAACGTTCTTACTGCTGAGAAAAAGAAGCACTCACCTGATTCCTCTCCTGCTGGGCCAATCAGCAGTCCTGTTGCAGAAAGTAGTGCCTCTGAAGCTAAAAGTGAAAGTGGCCAGTCTGAAACAGGAGGTCCTGAAGAAGTTGCAGATGCCAAGGAGACTGAAGAACTTGCAACTGAAACTGGTAGCGATGGTGATGTAGAACCAAAACAGGAAAATGTTGAGGAAGGGAATGATAATCAAAGTAGTCAGAGCACGTTCAGTTATGATCAGCTAAAGACCAAATCTAGTAATCCTGTGTCTGGAATAGATTTCAAACGAAGAGAGGCCTATCTATCAGATGAAGACTTCAGCACAGTATTTGGAATGACAAAAGAAGCATTCTATAAATTGCCAAAATGGAAGCAAGACATGCAGAAAAGGAAGGCTGATCTGTTTTAG 2940 0.4255 MSSSTKVLDPGFQAVGQKVGTEIWRIENFQPVPLPKSEYGKFYMGDSYIILQTTQGKGGAYFYDIHFWLGKDTSQDEAGAAAIKAVELDAALGGRAVQHREVQGHESDKFLSYFKPCIIPLEGGVASGFKKPEEEVFETRLYICKGKRVVPFARSSLNHDDVFILDTQNKIYQFNGANSNIQERAKALEVTQFLKEKYHEGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVIGEDDIIPETTPAQLYCIADGEVKPVEGELSKSLLDNSKCYLLDCGAEVFVWVGRVTQVEERKAACQAAEEFVASQNRPRSTRITRIIQGYETHAFKSNFDTWPSGSATTGAEEGRGKVAALLKQQGMGVKGMTKSTPVNEEIPPLLEGGGKMEVWLINGSAKNPLPKDDIGKFYSGDCYIVLYTYHSGERKEDYFLCCWFGKDSVEEDQTMATRLANTMSNSLKGRPVQGRIFEGKEPPQFVALFQHMVVLKGGLSSGYKKLMAEKGLPDETYTAESIALIRISGTSIHNNKAVQVDAVGTSLNSTECFLLQSGSSLFIWHGSQCSFEQQQLAAKVAEFLKSGVAIKYAKEGTESSAFWFALGGKQSFTSKKATNETVRDPHLFTFSLSKGKFQVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQNAFEIGQKYIERAAALEGLSPYVPLYKVTEGNEPCFLTTYFSWDHAKATAQGNSFQKKVSLLFGIGHSVEDKSNGSSQGAGPRQRAEALAALSSAFNSPSEKTDSMDRDRLNGVNQGGPRQRAEALAALNSAFNSSSPSRTVVPRPAGTSQGSQRSAAVAALSNVLTAEKKKHSPDSSPAGPISSPVAESSASEAKSESGQSETGGPEEVADAKETEELATETGSDGDVEPKQENVEEGNDNQSSQSTFSYDQLKTKSSNPVSGIDFKRREAYLSDEDFSTVFGMTKEAFYKLPKWKQDMQKRKADLF 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1421 979 FunFam Villin-like 1 609 730 - -
Lele14g1421 979 Gene3D Severin 514 607 IPR029006 -
Lele14g1421 979 MobiDBLite consensus disorder prediction 849 875 - -
Lele14g1421 979 ProSiteProfiles Headpiece (HP) domain profile. 914 979 IPR003128 GO:0003779|GO:0007010
Lele14g1421 979 FunFam Villin-4 243 349 - -
Lele14g1421 979 FunFam Gelsolin 516 608 - -
Lele14g1421 979 Gene3D Severin 133 240 IPR029006 -
Lele14g1421 979 Pfam Villin headpiece domain 944 979 IPR003128 GO:0003779|GO:0007010
Lele14g1421 979 PANTHER VILLIN 4 969 IPR007122 GO:0051015
Lele14g1421 979 CDD gelsolin_S4_like 381 482 - -
Lele14g1421 979 SUPERFAMILY Actin depolymerizing proteins 10 147 - -
Lele14g1421 979 MobiDBLite consensus disorder prediction 879 908 - -
Lele14g1421 979 Gene3D Severin 6 132 IPR029006 -
Lele14g1421 979 SUPERFAMILY Actin depolymerizing proteins 378 523 - -
Lele14g1421 979 Gene3D Severin 608 730 IPR029006 -
Lele14g1421 979 MobiDBLite consensus disorder prediction 766 934 - -
Lele14g1421 979 MobiDBLite consensus disorder prediction 799 832 - -
Lele14g1421 979 Pfam Gelsolin repeat 259 332 IPR007123 -
Lele14g1421 979 Pfam Gelsolin repeat 29 111 IPR007123 -
Lele14g1421 979 Pfam Gelsolin repeat 528 596 IPR007123 -
Lele14g1421 979 Pfam Gelsolin repeat 630 706 IPR007123 -
Lele14g1421 979 Pfam Gelsolin repeat 403 478 IPR007123 -
Lele14g1421 979 Pfam Gelsolin repeat 149 212 IPR007123 -
Lele14g1421 979 FunFam Gelsolin 6 131 - -
Lele14g1421 979 CDD gelsolin_S1_like 12 124 - -
Lele14g1421 979 SUPERFAMILY Actin depolymerizing proteins 218 340 - -
Lele14g1421 979 Gene3D Severin 384 513 IPR029006 -
Lele14g1421 979 SUPERFAMILY VHP, Villin headpiece domain 914 979 IPR036886 GO:0003779|GO:0007010
Lele14g1421 979 CDD gelsolin_S6_like 617 715 - -
Lele14g1421 979 MobiDBLite consensus disorder prediction 909 934 - -
Lele14g1421 979 FunFam Villin-4 380 515 - -
Lele14g1421 979 Gene3D Severin 241 351 IPR029006 -
Lele14g1421 979 SUPERFAMILY Actin depolymerizing proteins 591 713 - -
Lele14g1421 979 Gene3D Villin headpiece domain 902 979 IPR036886 GO:0003779|GO:0007010
Lele14g1421 979 CDD gelsolin_S5_like 514 604 - -
Lele14g1421 979 SUPERFAMILY Actin depolymerizing proteins 129 232 - -
Lele14g1421 979 CDD gelsolin_S3_like 249 338 - -
Lele14g1421 979 SMART VILL_6 513 602 IPR007122 GO:0051015
Lele14g1421 979 SMART VILL_6 246 339 IPR007122 GO:0051015
Lele14g1421 979 SMART VILL_6 139 229 IPR007122 GO:0051015
Lele14g1421 979 SMART VILL_6 387 485 IPR007122 GO:0051015
Lele14g1421 979 SMART VILL_6 19 117 IPR007122 GO:0051015
Lele14g1421 979 SMART VILL_6 619 714 IPR007122 GO:0051015
Lele14g1421 979 SUPERFAMILY Actin depolymerizing proteins 505 608 - -
Lele14g1421 979 SMART VHP_1 944 979 IPR003128 GO:0003779|GO:0007010
Lele14g1421 979 CDD gelsolin_S2_like 138 227 - -
Lele14g1421 979 PRINTS Gelsolin family signature 432 450 IPR007122 GO:0051015
Lele14g1421 979 PRINTS Gelsolin family signature 318 339 IPR007122 GO:0051015
Lele14g1421 979 PRINTS Gelsolin family signature 528 548 IPR007122 GO:0051015
Lele14g1421 979 PRINTS Gelsolin family signature 406 422 IPR007122 GO:0051015
Lele14g1421 979 PRINTS Gelsolin family signature 465 485 IPR007122 GO:0051015
Lele14g1421 979 PRINTS Gelsolin family signature 588 607 IPR007122 GO:0051015
Lele14g1421 979 PRINTS Gelsolin family signature 640 662 IPR007122 GO:0051015
Lele14g1421 979 PRINTS Gelsolin family signature 669 688 IPR007122 GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1421 Lele-ChrLele14 22690480 22699409 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0862 05 5285960 5286875 Lele14g1421 14 22690480 22699409 CCT
Lele14g1421 14 22690480 22699409 Lele15g0927 15 5415367 5424436 hybridization
Lele14g1421 14 22690480 22699409 Lele16g0950 16 5374733 5383766 hybridization