Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0717 ATGGACTTTGATTCGGACGAACCCACTCCAACTACGACCGCCGCCTGTATGCCCGAACCACCATCACCGTCGCATCGCCGTTTCATCTGTTCCCACTGCTCGCGCCCCGGCCCGGTGTGCCTCTGCCACGTCCTTCCGTCGCACCCCATCCAAACCTCGACCCAAGTAGTGATCCTTCACCACCCCCACGAGGCACAGCACAAGCTCTCCACCACTCCAATTCTCACCAAGGCACTACTCAACGCCAACGCCATCGTTGGCCGACGTCTCCACCCTGGCCTTTCCCCACTACTCGATCAATCTTCCAAGGCCTTGTATCTCTTTCCGCCTACGCATTCCTCGCCGGCCGTCAATATCAATCATCTCAATACATTGGATTCGCTCCGAAATAATGGAGAAGATTTGGTTTTGATCGTTTTTGATGGAACGTGGAAGCACGCGAGGGAGATGGTGAAGGCCAGCGAGGAGTTCCTTTCCAAGTTCGCTACTAGGGTTTGTTTGGAGACAGATGAAAAAGTGAGTGGTGGAAGTATATACGACTCCGAATTGATATTGAGGAAGGAACCTTTTTCTGGGTGCGTGAGTACCATGGAGGCTGTGGCAAGAGCTTTGAGAGTGATTGAGCCAAATGGGTTAGAGATTGAGAGCAAATTAATTGAGATTTTGAGGGAAACGGTGAAGCTCCAGGCTAGTTATTTGAAGCCAATGAAGCCAAGGCCAAAACTGATGAATAAGGTCAAGGAAAAGGAGAAGCAAATGGAAAAGAATGAGAATTCTGTATAA 783 0.5032 MDFDSDEPTPTTTAACMPEPPSPSHRRFICSHCSRPGPVCLCHVLPSHPIQTSTQVVILHHPHEAQHKLSTTPILTKALLNANAIVGRRLHPGLSPLLDQSSKALYLFPPTHSSPAVNINHLNTLDSLRNNGEDLVLIVFDGTWKHAREMVKASEEFLSKFATRVCLETDEKVSGGSIYDSELILRKEPFSGCVSTMEAVARALRVIEPNGLEIESKLIEILRETVKLQASYLKPMKPRPKLMNKVKEKEKQMEKNENSV 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0717 260 PANTHER UNCHARACTERIZED 21 240 IPR039262 -
Lele08g0717 260 Pfam DTW domain 27 229 IPR005636 -
Lele08g0717 260 MobiDBLite consensus disorder prediction 1 20 - -
Lele08g0717 260 Coils Coil 239 259 - -
Lele08g0717 260 SMART DTW_2a 26 234 IPR005636 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0717 Lele-ChrLele08 4449121 4449903 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1490 13 24248543 24261554 Lele08g0717 08 4449121 4449903 CCT
Lele14g1413 14 22644594 22647677 Lele08g0717 08 4449121 4449903 CCT
Lele15g0936 15 5465158 5467893 Lele08g0717 08 4449121 4449903 CCT
Lele16g0960 16 5430923 5433991 Lele08g0717 08 4449121 4449903 CCT
Lele05g0862 05 5285960 5286875 Lele08g0717 08 4449121 4449903 hybridization
Lele06g0715 06 4413622 4416816 Lele08g0717 08 4449121 4449903 hybridization