Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0927 ATGTCTAGCTCTATGAAGGTTTTGGATCCTGCATTCCAGGCAGTGGGTCAGAAAGTAGGGACTGAAATATGGAGGATTGAGAATTTCCAGCCAGTACCGTTGCCTAAATCTGATCATGGAAAGTTCTACATGGGAGATTCGTACATTATTTTGCAGACAACACAAGGCAAAGGAGGCGCTTATTTCTATGATATACACTTCTGGCTTGGAAAGGATACCAGTCAGGATGAGGCAGGGGCAGCTGCCATCAAAGCCGTTGAACTTGATGCAGCTCTTGGAGGACGTGCAGTGCAGCATAGGGAAGTCCAAGGCCATGAATCTGACAAATTTTTGTCATACTTTAAACCATGTATAATACCACTAGAGGGAGGTGTTGCATCTGGGTTTAAAAAACCTGAGGAAGAAGTGTTTGAAACACGCTTGTACATATGCAAAGGAAAACGAGTTGTCAGAATGAAACAGGTCCCTTTTGCTCGGTCTTCTCTGAATCATGATGATGTATTTATCCTTGACACTCAGAACAAGATTTATCAATTCAATGGGGCGAATTCAAATATTCAGGAAAGAGCCAAGGCTTTGGAAGTAACCCAGTTTTTAAAGGAAAAATATCATGAAGGGAAATGTGAAGTTGCAATTGTTGATGATGGAAAGTTGGACACTGAGTCAGATTCAGGTGAATTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTGGGAAGAAGGTCATTGGCGAGGATGATATTATTCCAGAGACTACTCCTGCTCAGCTTTATTGTATTGCTGATGTTGAGGTCAAACCAGTTGAAGCTGAACTGTCTAAATCACTGTTGGAGAATAACAAATGCTATTTACTGGACTGTGGTGCGGAGGTGTTTGTCTGGGTTGGCCGGGTAACACAAGTTGAAGAACGAAAAGCAGCATGCCAGGCTGCTGAGGAGTTCGTTGCAAGTCAAAATAGGCCGAAAGCAACCCGGATAACCAGAATTATTCAAGGTTATGAGCCACATGCTTTTAAGTCCAACTTTGATTCTTGGCCATCAGGATCCGCTGCTACTGGTGCTGAGGAAGGGAGAGGAAAAGTTGCTGCTTTGCTGAAGCAACAAGGCATGGGTGTCAAGGGGATGACAAAAAGTACACCAGTCAATGAAGAAATTCCACCTCTGCTTGAAGGAGGTGGAAAGATGGAGGTATGGCTAATCAATGGAAGTGCCAAGAATCCATTGCTCAAGGAGGATATTGGGAAATTTTACAGTGGAGATTGTTACATAGTATTGTACACTTACCACTCTGGTGAGAGGAAGGAAGACTACTTCTTGTGTTGTTGGTTTGGTAAAGATAGCATTGAGGAAGACCAAAGGATGGCTACTCGATTGGCCAATACTATGTCCAACTCACTAAAGGGTAGACCTGTTCAGGGCTGCATATTTGAAGGTAAAGAGCCACCACAATTCGTTGCTCTCTTTCAGCCTATGGTGGTCCTTAAGGGAGGCTTGAGTTCTGGTTACAAAAAGTTAATAGCAGAGAAAGGTTTGCCAGATGAGACTTACACAGCAGAAAGTATTGCACTTATTCGAATTTCTGGAACTTCAATTCATAATAATAAAGCAGTGCAAATCGATGCAGTAGGAACATCGTTAAATTCTACTGAGTGTTTCCTGCTGCAATCTGGCTCATCACTTTTCACTTGGCATGGAAGTCAATGTTCTTTTGAACAGCAGCAGCTGGCAGCTAAAATTGCTGAGTTTTTGAAGCCAGGAGTTGCGATAAAACATGCTAAGGAAGGGACAGAAAGTTCAGCCTTTTGGTTTGCACTTGGAGGCAAACAGAGCTTCACCAGCAAAAAAGCCACCAATGAAACTGTTAGAGATCCACATTTGTTCACATTTTCATTAAGCAAAGGAAAGTTTCAGGCAGAAGAAGTTTACAACTTTTCCCAAGATGATCTGTTGACAGAGGATATCCTCATACTTGACACATATGCGGAAGTATTTGTTTGGGTTGGTCAGTCTGTGGATTCAAAAGAAAAACAAAATGCTTTTGAAATTGGACAGAAATATATAGATAGGGCCGCAGCTCTAGAGGGACTCTCCCCTCATGTACCGCTGTATAAAGTTACAGAAGGCAACGAACCTTGCTTTTTCACAACATACTTTTCATGGGATCACTCAAAAGCTACTGCTCAAGGAAACTCGTTCCAGAAAAAGGTGTCTTTACTTTTTGGGATTGGCCATGCTGTTGAGGATAAGTCCAACGGATCCAGTCAAGGAGGAGGACCTAGACAAAGAGCAGAAGCTTTAGCTGCCTTATCTTCTGCATTTAATTCGCCTTCTGAGAAAACATCCAGCATGGATAGAGATAGACTGAACGGAGTAAATCAAGGAGGTCCAAGACAAAGAGCTGAAGCTTTAGCTGCCTTGAACTCTGCATTTAATTCATCATCCCCAGGTAGAACTGTTGTTCCCAGGCCTGCTGGAACAAGCCAAGGTTCACAAAGAGCAGCAGCGGTAGCTGCTCTTTCAAACGTTCTTACTGCTGAGAAGAAGCACTCACCTGATTCCTCTCCTGCTGGGCCAATCAGCAGTCCTGTTGCTGAAAGCAGTGCCTCTGAAGCTAAAAGTGAAAGTGGCCAGTCTGAAACAGAAGGTCCTGAAGAAGTTGCAGATGCCAAGGAGACTGAAGAACTTGCAACTGAAACAGGTAGCAGTGGTGATGTAGAACGAAAACAGGAAAATGTTGAGGATGGGAATGATAATCAAAGTAGTCAGAGCACGTTCAGTTATGATCAACTAAAGACCAAATCTAGTAATCCTGTGTCTGGAATAGATTTCAAACGAAGAGAGGCCTATCTATCAGATGAAGACTTCAACACAGTATTTGGAATGACAAAAGAAGCATTCTATAAATTGCCAAAATGGAAGCAAGACATGCAGAAAAGGAAAGCTGATCTGTTTTAG 2952 0.4278 MSSSMKVLDPAFQAVGQKVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQTTQGKGGAYFYDIHFWLGKDTSQDEAGAAAIKAVELDAALGGRAVQHREVQGHESDKFLSYFKPCIIPLEGGVASGFKKPEEEVFETRLYICKGKRVVRMKQVPFARSSLNHDDVFILDTQNKIYQFNGANSNIQERAKALEVTQFLKEKYHEGKCEVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVIGEDDIIPETTPAQLYCIADVEVKPVEAELSKSLLENNKCYLLDCGAEVFVWVGRVTQVEERKAACQAAEEFVASQNRPKATRITRIIQGYEPHAFKSNFDSWPSGSAATGAEEGRGKVAALLKQQGMGVKGMTKSTPVNEEIPPLLEGGGKMEVWLINGSAKNPLLKEDIGKFYSGDCYIVLYTYHSGERKEDYFLCCWFGKDSIEEDQRMATRLANTMSNSLKGRPVQGCIFEGKEPPQFVALFQPMVVLKGGLSSGYKKLIAEKGLPDETYTAESIALIRISGTSIHNNKAVQIDAVGTSLNSTECFLLQSGSSLFTWHGSQCSFEQQQLAAKIAEFLKPGVAIKHAKEGTESSAFWFALGGKQSFTSKKATNETVRDPHLFTFSLSKGKFQAEEVYNFSQDDLLTEDILILDTYAEVFVWVGQSVDSKEKQNAFEIGQKYIDRAAALEGLSPHVPLYKVTEGNEPCFFTTYFSWDHSKATAQGNSFQKKVSLLFGIGHAVEDKSNGSSQGGGPRQRAEALAALSSAFNSPSEKTSSMDRDRLNGVNQGGPRQRAEALAALNSAFNSSSPGRTVVPRPAGTSQGSQRAAAVAALSNVLTAEKKHSPDSSPAGPISSPVAESSASEAKSESGQSETEGPEEVADAKETEELATETGSSGDVERKQENVEDGNDNQSSQSTFSYDQLKTKSSNPVSGIDFKRREAYLSDEDFNTVFGMTKEAFYKLPKWKQDMQKRKADLF 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0927 983 Gene3D Villin headpiece domain 905 983 IPR036886 GO:0003779|GO:0007010
Lele15g0927 983 Gene3D Severin 250 354 IPR029006 -
Lele15g0927 983 PRINTS Gelsolin family signature 674 693 IPR007122 GO:0051015
Lele15g0927 983 PRINTS Gelsolin family signature 470 490 IPR007122 GO:0051015
Lele15g0927 983 PRINTS Gelsolin family signature 437 455 IPR007122 GO:0051015
Lele15g0927 983 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Lele15g0927 983 PRINTS Gelsolin family signature 533 553 IPR007122 GO:0051015
Lele15g0927 983 PRINTS Gelsolin family signature 645 667 IPR007122 GO:0051015
Lele15g0927 983 PRINTS Gelsolin family signature 593 612 IPR007122 GO:0051015
Lele15g0927 983 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Lele15g0927 983 FunFam Gelsolin 6 131 - -
Lele15g0927 983 SUPERFAMILY Actin depolymerizing proteins 596 718 - -
Lele15g0927 983 Gene3D Severin 6 132 IPR029006 -
Lele15g0927 983 SUPERFAMILY Actin depolymerizing proteins 383 528 - -
Lele15g0927 983 FunFam Villin-like 1 614 735 - -
Lele15g0927 983 FunFam Villin-like 1 132 247 - -
Lele15g0927 983 SUPERFAMILY Actin depolymerizing proteins 223 345 - -
Lele15g0927 983 SMART VILL_6 137 234 IPR007122 GO:0051015
Lele15g0927 983 SMART VILL_6 252 344 IPR007122 GO:0051015
Lele15g0927 983 SMART VILL_6 392 490 IPR007122 GO:0051015
Lele15g0927 983 SMART VILL_6 624 719 IPR007122 GO:0051015
Lele15g0927 983 SMART VILL_6 518 607 IPR007122 GO:0051015
Lele15g0927 983 SMART VILL_6 19 117 IPR007122 GO:0051015
Lele15g0927 983 FunFam Villin-4 248 354 - -
Lele15g0927 983 Gene3D Severin 133 245 IPR029006 -
Lele15g0927 983 SMART VHP_1 948 983 IPR003128 GO:0003779|GO:0007010
Lele15g0927 983 ProSiteProfiles Headpiece (HP) domain profile. 918 983 IPR003128 GO:0003779|GO:0007010
Lele15g0927 983 PANTHER VILLIN 4 973 IPR007122 GO:0051015
Lele15g0927 983 CDD gelsolin_S4_like 386 487 - -
Lele15g0927 983 Pfam Gelsolin repeat 540 600 IPR007123 -
Lele15g0927 983 Pfam Gelsolin repeat 29 111 IPR007123 -
Lele15g0927 983 Pfam Gelsolin repeat 264 337 IPR007123 -
Lele15g0927 983 Pfam Gelsolin repeat 637 713 IPR007123 -
Lele15g0927 983 Pfam Gelsolin repeat 409 483 IPR007123 -
Lele15g0927 983 Pfam Gelsolin repeat 149 217 IPR007123 -
Lele15g0927 983 MobiDBLite consensus disorder prediction 914 938 - -
Lele15g0927 983 SUPERFAMILY VHP, Villin headpiece domain 918 983 IPR036886 GO:0003779|GO:0007010
Lele15g0927 983 SUPERFAMILY Actin depolymerizing proteins 510 613 - -
Lele15g0927 983 CDD gelsolin_S1_like 12 124 - -
Lele15g0927 983 FunFam Gelsolin 519 613 - -
Lele15g0927 983 MobiDBLite consensus disorder prediction 853 875 - -
Lele15g0927 983 CDD gelsolin_S5_like 519 609 - -
Lele15g0927 983 MobiDBLite consensus disorder prediction 771 939 - -
Lele15g0927 983 CDD gelsolin_S3_like 254 343 - -
Lele15g0927 983 SUPERFAMILY Actin depolymerizing proteins 129 237 - -
Lele15g0927 983 Gene3D Severin 523 612 IPR029006 -
Lele15g0927 983 CDD gelsolin_S6_like 622 720 - -
Lele15g0927 983 Pfam Villin headpiece domain 948 983 IPR003128 GO:0003779|GO:0007010
Lele15g0927 983 Gene3D Severin 388 522 IPR029006 -
Lele15g0927 983 CDD gelsolin_S2_like 138 232 - -
Lele15g0927 983 SUPERFAMILY Actin depolymerizing proteins 9 148 - -
Lele15g0927 983 MobiDBLite consensus disorder prediction 876 913 - -
Lele15g0927 983 Gene3D Severin 613 735 IPR029006 -
Lele15g0927 983 MobiDBLite consensus disorder prediction 804 836 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0927 Lele-ChrLele15 5415367 5424436 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0862 05 5285960 5286875 Lele15g0927 15 5415367 5424436 CCT
Lele13g1497 13 24301455 24310499 Lele15g0927 15 5415367 5424436 hybridization
Lele14g1421 14 22690480 22699409 Lele15g0927 15 5415367 5424436 hybridization