Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0263 ATGATCTCCTCCAACAGATGCGCTTTCTTGAGCAACTCGGGGTTAGGTGGGTCGTGCAACTTCTCTGCTGCACAGAGAAGAGTTTCAGGTCCATTCAGAGTGGTTTGTATGGCACCAAGCAATGACAAAAACGGCAGCGTTGTGATGGAGATTGAAACACAGTCAACACCCTTGAAAGAAATAAGGAGTAACTCGGCGGTGGCTGATGTGAACGATAATGAAATCTCCTCCGGCGGCCCTCAGGATGTGTACGGCGAGGATAAGGCCACGGAGGATCATTTTGTTACTCCTTGGAGTGTCTCTGTTGCTAGTGGTTACACATTGTTGAGAGATCCTCACTTCAACAAAGGGCTGGCCTTCACTGAAAAGGAGAGGGATGCCCACTACTTGCGCGGTCTTCTTCCACCAACGGTTATTCCTCAAGAAACTCAGGTGAAGAAAATGATCCAACATATACGCCAATATCAGGTTCCGTTGCAGAAATACATGGCAATGATGGATCTTCAGGAGAGAAATGAGAGGTTGTTTTATAAGCTTCTTATTGATCACGTTGAAGAGTTACTCCCAGTTGTCTATACTCCTACTGTTGGTGAAGCTTGCCAGAAATATGGGAGCATCTTCATCCATCCTCAGGGTCTTTATATAAGTTTGAAAGAGAAGGGGAAGATTCTTGAAGTACTAAGGAATTGGCCCGAGAAGAACATTCAAGTTATTGTTGTAACTGACGGAGAAAGGATCCTGGGTCTTGGAGATCTTGGTTGTCAAGGAATGGGAATACCAGTGGGAAAACTTTCTTTATATACTGCACTTGGAGGAGTTCGTCCTTCAGCTTGCTTGCCTATTACCATCGATGTGGGTACAAACAATGAGAAGCTGTTGAATGATGAATTATATATAGGGCTCAAGCAAAGACGAGCAACTGGACAGGAATATGCTGAACTTATGCACGAATTTATGTCTGCAGTCAAGCAAACTTATGGGGAAAAGGTCCTCATTCAGTTTGAAGACTTTGCAAACCACAATGCTTTTGATCTGCTTGAAAAATATAGATCAACACATCTTGTTTTCAATGATGATATTCAGGGAACAGCATCAGTGGTTCTTGCTGGCCTAGTTGCGGCTCTGAAATTGGTTGGGGGAAACTTAGCTGACCACAGATTCTTATTCCTTGGTGCTGGAGAGGCTGGTACTGGAATAGCAGAACTCATAGCACTTGAAATTTCAAAGCAGACAAATGTACCTGTGGAGGAAGCACGCAAGAACATATGGTTGGTGGACTCAAAGGGATTGATCGTGAGTTCCCGTAAAGGATCACTTCAACATTTTAAGAAGCCCTGGGCTCATGAACACGAACCTGTTAAAAAACTTGTTGATGCTGTTAATCAAATTAAGCCTACAGTGTTGATTGGAACATCGGGGCAAGGAAGAGCTTTTACTAAGGAGGTGATTGAGGCTGTGTCCTCTATCAACGAGAAACCTATTATTCTTTCTCTTTCCAACCCAACATCACAGTCAGAATGTACCGCTGAAGAAGCTTATTCGTGGAGCCAGGGACGTGCCATTTTTGCTAGTGGGAGCCCATTTCCCCCAGTTGAATATGCGGGGAAAGTGTTCGTGCCTGGCCAGGCTAATAATGCATACATATTTCCTGGATTCGGACTGGGTTTAATAATGTCTGGTACCATTCGAGTGCATGACGACCTGCTTCTGGCTGCATCTGAGGCTTTGGCTGCAGAAGTGAGCCAGGAGAACTTTGACAAGGGACTTATATTCCCACCATTCACTAACATCAGAAAGATTTCAGCAAAGATAGCTGCCAAAGTTGCTGCTAAGGCTTATGAGCTTGGCTTGGCTACTCGCCTTCCTCAACCGAAAAATTTGGTGGAGTTTGCTGAGAGCTGTATGTATACCCCAGCCTACAGGAACTACCGTTGA 1935 0.447 MISSNRCAFLSNSGLGGSCNFSAAQRRVSGPFRVVCMAPSNDKNGSVVMEIETQSTPLKEIRSNSAVADVNDNEISSGGPQDVYGEDKATEDHFVTPWSVSVASGYTLLRDPHFNKGLAFTEKERDAHYLRGLLPPTVIPQETQVKKMIQHIRQYQVPLQKYMAMMDLQERNERLFYKLLIDHVEELLPVVYTPTVGEACQKYGSIFIHPQGLYISLKEKGKILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEKLLNDELYIGLKQRRATGQEYAELMHEFMSAVKQTYGEKVLIQFEDFANHNAFDLLEKYRSTHLVFNDDIQGTASVVLAGLVAALKLVGGNLADHRFLFLGAGEAGTGIAELIALEISKQTNVPVEEARKNIWLVDSKGLIVSSRKGSLQHFKKPWAHEHEPVKKLVDAVNQIKPTVLIGTSGQGRAFTKEVIEAVSSINEKPIILSLSNPTSQSECTAEEAYSWSQGRAIFASGSPFPPVEYAGKVFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASEALAAEVSQENFDKGLIFPPFTNIRKISAKIAAKVAAKAYELGLATRLPQPKNLVEFAESCMYTPAYRNYR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0263 644 PIRSF ME 61 644 IPR001891 GO:0004470|GO:0004471
Lal8g0263 644 PANTHER NADP-DEPENDENT MALIC ENZYME 4, CHLOROPLASTIC 74 644 - -
Lal8g0263 644 SMART Malic_M_2 360 613 IPR012302 GO:0051287
Lal8g0263 644 Pfam Malic enzyme, N-terminal domain 169 350 IPR012301 GO:0004471
Lal8g0263 644 PRINTS Malic enzyme signature 175 199 IPR001891 GO:0004470|GO:0004471
Lal8g0263 644 PRINTS Malic enzyme signature 235 264 IPR001891 GO:0004470|GO:0004471
Lal8g0263 644 PRINTS Malic enzyme signature 271 293 IPR001891 GO:0004470|GO:0004471
Lal8g0263 644 PRINTS Malic enzyme signature 331 349 IPR001891 GO:0004470|GO:0004471
Lal8g0263 644 PRINTS Malic enzyme signature 356 372 IPR001891 GO:0004470|GO:0004471
Lal8g0263 644 PRINTS Malic enzyme signature 387 403 IPR001891 GO:0004470|GO:0004471
Lal8g0263 644 PRINTS Malic enzyme signature 490 506 IPR001891 GO:0004470|GO:0004471
Lal8g0263 644 Gene3D - 103 357 IPR037062 GO:0004471
Lal8g0263 644 Gene3D - 358 644 - -
Lal8g0263 644 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Lal8g0263 644 PANTHER MALIC ENZYME-RELATED 74 644 - -
Lal8g0263 644 ProSitePatterns Malic enzymes signature. 356 372 IPR015884 GO:0004471
Lal8g0263 644 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 84 359 IPR046346 -
Lal8g0263 644 Pfam Malic enzyme, NAD binding domain 360 612 IPR012302 GO:0051287
Lal8g0263 644 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 360 643 IPR036291 -
Lal8g0263 644 CDD NAD_bind_1_malic_enz 360 638 - -
Lal8g0263 644 SMART malic_2 169 350 IPR012301 GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0263 Lal-Chr8 1765375 1771573 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0263 K00029 - gmx:100791514 1113.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0165 18 1332273 1336833 Lal8g0263 8 1765375 1771573 ECH
Lal16g1076 16 7205914 7211742 Lal8g0263 8 1765375 1771573 ECH
Lal23g0593 23 8702825 8708277 Lal8g0263 8 1765375 1771573 ECH
Lal8g0263 8 1765375 1771573 Lal8g0263 8 1765375 1771573 ECH
Lal8g0263 8 1765375 1771573 Lal4g0291 4 1899356 1904394 ECH
Lal8g0263 8 1765375 1771573 Lal10g0754 10 15221590 15223887 ECH
Lal10g1117 10 17984839 17991314 Lal8g0263 8 1765375 1771573 LSH
Lal8g0263 8 1765375 1771573 Lal18g0165 18 1332273 1336833 PCT
Lal18g0165 18 1332273 1336833 Lal8g0263 8 1765375 1771573 PCT