Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0754 ATGGGGGCTAAGTCGCATCTACGGTATGCGAGATTGGTGTCGCATTGTACGAATGCGACATCTGTTCTTCTATATAAGACAGGGGCGAGCCGATACTGTATTTACAGAGAGACGAGAGATATTGTCAACGAATTTAGTGATGATGAAGACATTGAGCTATGTTGTGATGATGAAGAAGATTTGGAGCTTGATAGTAGTGAACTAGCTAACATAACATACGGTACTCCTTCGTCATTTTTCGTTACCATTGATTCAGATGCTGGACAAGATATCCAAAATAGAAAAAATAATTTAAGTAATGACTTTGATAATGAACTGTTTATTGGCATGCAATTTGAATCAAAGGATGCAACAATAAATGCTATAAAACAGTTTCATATTAAGAATTATGTTGACTACATTGTTGTAGAGTCAAGACCGGATAGATATGTCGGACAGTGTAAATATTTTGGTAGTGGATGTCAATGGAGAATTAGGGCATCACTTAATGGAAAGCGAGATTTATGGGAGATTAGAAAAATTAATGGAACACACACATGTGTATCCACTAATATTTCTCAAGATCATACGAAATTAAATTCATCATTCATTGCAAATTGTATTATTCACTTAGTATCGGAAGATCCTGGTATACCAGTTAAAGCATTAGTAAAAGAAATTGTCACTCGTTTTGGTTATACGGTAACGTATAGAAAGGCCTGGACAGCTAAACAAATTGCAATGTCACAAATTTATGGTGATTGGGAGGGATCTTACAAGGAGTTACCTCGTTGGTTTAACACTGTCCAGTGTTATGCACCTGGTACAATTGTAAGATATGCATCATCTCGTCATGATCAGAGTGGTAGTTTAATTCTTGATAGAGTTTTTTGGGCTTTCAAGCCTTGTATTGAAGGATTTGGATTTTGCAAACCGATCCTTCAAGTGGATGGGACATTCTTGACCGGAAAATATAATGGAACTTTGTTAATTGCAAGTTCGCAAGATGGTAATAGACGAATATTTCCTGTTGCATTTGCCATTGTCGAAGGAGAAACTAAAGAAGCATGGGAGTGGTTTTTCTACAATGTTCGTACTTATGTTACCCCACAACCGAATATATGTATAATATCAGATAGAGGTACAGGTTTGTTGGGTGCACTTCGCACTGAGCTTTGTCAATGGTGTAATGCATATTCAGTATATTGTATTCGTCATGTTGCAAGCAATTTCAATAAAGAATTCAAAGATGGTGACCTTAAAGAAAAAGTTATTCAAATGGGATATGAGTTGATGCGGCCCCGTTTTGAGCGTATGCTTGATGATTTGCGTCAAAAAAATCCCAGAGCAGCAGCTTGGCTAGACAACATCCCTAAAGAAAAATGGACACAATCATATGATGAAGGGAGACGTTATGGGCATATGACGACTAACTTAGCAGAGTGTGTTAATGGTGTTTTGAAAGGATCAAGAGCTTTGCCTATCACTTCCCTTGTACAAGCAACATATCATAGACTCAATTCTTGGTTTCTTCACCATAGAAATGAAGCAACAAGTATGATAATGGCAGGTCATATATATTGTGAGGAATTGACTAAGGTGTTAAATGAAAATAACCGTAAAGCTACATGTCAAACAATTCGAACTTTTTCAAGGGAGTCAGGAGTATTTGTGGTTGAGGTTCCTGGTAGAGAAGGTAGTCGACATTCGAAGGTATACACAGTAAGACTAAACCAGTACTGGTGTGAATGTGGAGAATTTCAGTCACTTAGATTGCCATGCTCTCATGTCATTGCCACATGTTCATCAATGAATTTAGACTATCGTCAATTCATTTCACCAATATATCGGTTGGATAACTTATTAAAGGCCTACGGACGTGGGTTTGAACCGATTGGTAATGAAGAATATTGGCCTCATTATTCTGGTCCAATGTTCATTCCTAATCCACTTATGCGAAGAAATCGAACTGGAAGACCCAAAACATTACGCATTCACAACGAGATGGACGATTGTGCAACGGAAAAAAATAAAAAATGTGGGTTGTGTAGAACTGAAGGGCACAATAGGAAGACATGTCCATTTAAAAATAGTGAAATAGGTGAAAGTTCAAGACATTAA 2100 0.3729 MGAKSHLRYARLVSHCTNATSVLLYKTGASRYCIYRETRDIVNEFSDDEDIELCCDDEEDLELDSSELANITYGTPSSFFVTIDSDAGQDIQNRKNNLSNDFDNELFIGMQFESKDATINAIKQFHIKNYVDYIVVESRPDRYVGQCKYFGSGCQWRIRASLNGKRDLWEIRKINGTHTCVSTNISQDHTKLNSSFIANCIIHLVSEDPGIPVKALVKEIVTRFGYTVTYRKAWTAKQIAMSQIYGDWEGSYKELPRWFNTVQCYAPGTIVRYASSRHDQSGSLILDRVFWAFKPCIEGFGFCKPILQVDGTFLTGKYNGTLLIASSQDGNRRIFPVAFAIVEGETKEAWEWFFYNVRTYVTPQPNICIISDRGTGLLGALRTELCQWCNAYSVYCIRHVASNFNKEFKDGDLKEKVIQMGYELMRPRFERMLDDLRQKNPRAAAWLDNIPKEKWTQSYDEGRRYGHMTTNLAECVNGVLKGSRALPITSLVQATYHRLNSWFLHHRNEATSMIMAGHIYCEELTKVLNENNRKATCQTIRTFSRESGVFVVEVPGREGSRHSKVYTVRLNQYWCECGEFQSLRLPCSHVIATCSSMNLDYRQFISPIYRLDNLLKAYGRGFEPIGNEEYWPHYSGPMFIPNPLMRRNRTGRPKTLRIHNEMDDCATEKNKKCGLCRTEGHNRKTCPFKNSEIGESSRH 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0754 699 Pfam SWIM zinc finger 558 596 IPR007527 GO:0008270
Lal10g0754 699 ProSiteProfiles Zinc finger SWIM-type profile. 566 598 IPR007527 GO:0008270
Lal10g0754 699 SMART 26again6 573 600 IPR006564 GO:0008270
Lal10g0754 699 Pfam MULE transposase domain 306 403 IPR018289 -
Lal10g0754 699 PANTHER POLYPROTEIN, PUTATIVE-RELATED 187 489 - -
Lal10g0754 699 PANTHER - 187 489 - -
Lal10g0754 699 Pfam MuDR family transposase 106 166 IPR004332 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0754 Lal-Chr10 15221590 15223887 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0754 - - lang:109344731 923.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0754 10 15221590 15223887 Lal10g0754 10 15221590 15223887 ECH
Lal16g1076 16 7205914 7211742 Lal10g0754 10 15221590 15223887 ECH
Lal23g0593 23 8702825 8708277 Lal10g0754 10 15221590 15223887 ECH
Lal18g0165 18 1332273 1336833 Lal10g0754 10 15221590 15223887 ECH
Lal8g0263 8 1765375 1771573 Lal10g0754 10 15221590 15223887 ECH
Lal10g1117 10 17984839 17991314 Lal10g0754 10 15221590 15223887 ECH