Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1844 ATGGTGTTGCATAAGAGGTTGAACTACGGTTTTAATGGCTATCAGGTGCCTACCATTCCTACAGCTTCAAGATCAGCTAGGGGGAGGGGTAAAATCAAGAAAAGGCGTGACAACAGTCAGATACAGGCCTTTGAAATTTTGGCTAGTGTAGCAGGAAACTTCCTGCAGGAGAATGATAGTTCTGTTCTCGACAACTCTGCTTCCGCAAAGGATAGTCACGATTTCACCAATCTTAACATAAAACACAAGAAAGATGACGGGGGAGGGTCATTCAATGGGGGACTATTTGAGAATGGAACCGTCTCTCCTTGTGTTACTGGTTCTCGAGGGGAACATGACAACCAAAGGGTCATGGGTGATTCATCTTTGCTTGGCAATAATCTTGAAGGGCAAGGACAAAATGTCCTTGAGAGGGAAGATGAACGGATGATCCACACTAAAGGCAACTCTGGTGGATTAATTGAGCCAAGACACAGAAATTTTGATTCTTTACCCGACGGTTCCACCGGTAGGAAATTAGTTAATAAAGATGATGGCGAAAACTTTGTTCCGTGTACTCAACTGAGTTCCAAAGATAAGAAGATATCTGGTCCACCACCAGATATGCTAAAATTGAAGGATACAAGTCCTTTTACAAGTGAGGAGAACAATAGTAGGCATAGTTCTGTGCTTGAAGATCCACAAAGGATGTATCCATTTAAGAAGAGGAAGTTCTTCAATCAGACCTCATCATCTGCATCTGATAGGGGGTCTCACTGCCAAGGCATATTTGATTCTTCTGACACCAAAGTTAATGGAACAAACCATTGCGCAGCGATTGAAGAATCATCCTCTATGGCTGGTCAACGAGTGCATCCCGGGTCGAAGGACTGCAACGTGAAGCTCAGCATAAAATCCTTTAAAGTCCCAGAGCTTTTTATCGAAATACCTGAAACTGCAACTATTGGTTCATTGAAGAGGACAGTACTAGAGGCTGTGACAGCTGTACTTGGTGACGAACTACACGTTGGCATCCTTCTTCAGGGAAAGAAGATCCGGGATGACAACAAAACTCTATTCCAGACCGGGATATCTCAAGATGACAAACGTCATAGGTTGGGGTTCATGTTGGAGCCAAGACATACTCAAATTTCTCCACCTTTGTACAATAAAGATCCTTGTTTTCTAACATCTGGTTCGCGACAAAAACTATCTAGGCAATCAACTTCTCTGATGTTACAACAAGGAACATATAATGTATCACAAGAGCGTTCTCTCATCAAAATTGAAAGTTGTGCTGAAAGTGATCTTAATGTGGTATCCTCTGTAACAGATACTTCAGCTAACAATAATTTGTCGAAATGTCGTACACTGGTAGCAGTTCCATCCATTAACATGGGGGCATTAGCTGTGGTTCCATTCCGCCGCAAGTCCGGGAATCATGACTTTTCACAACGCCGAATCAGGAGGCCTTTTTCTGTTGTAGAAGTAGAAGCACTGGTGCAGGCAGTTGAAAAACTTGGAACTGGAAGGTGGCGTGATGTCAAACAATGTGCATTTGACAACGCGAAGCATCGAACATATGTGGATTTGAAGGATAAGTGGAAGACATTGGTGCACACAGCAAGAATCTCCCCTCAGCAAAGGAGAGGAGAACCTGTTCCTCAGGAGCTTCTGGATAGGGTCTTAACTGCTCATGCTTACTGGTCTCAACAACAATGTAAGCATCAACTCAAACCAATGTGA 1725 0.4325 MVLHKRLNYGFNGYQVPTIPTASRSARGRGKIKKRRDNSQIQAFEILASVAGNFLQENDSSVLDNSASAKDSHDFTNLNIKHKKDDGGGSFNGGLFENGTVSPCVTGSRGEHDNQRVMGDSSLLGNNLEGQGQNVLEREDERMIHTKGNSGGLIEPRHRNFDSLPDGSTGRKLVNKDDGENFVPCTQLSSKDKKISGPPPDMLKLKDTSPFTSEENNSRHSSVLEDPQRMYPFKKRKFFNQTSSSASDRGSHCQGIFDSSDTKVNGTNHCAAIEESSSMAGQRVHPGSKDCNVKLSIKSFKVPELFIEIPETATIGSLKRTVLEAVTAVLGDELHVGILLQGKKIRDDNKTLFQTGISQDDKRHRLGFMLEPRHTQISPPLYNKDPCFLTSGSRQKLSRQSTSLMLQQGTYNVSQERSLIKIESCAESDLNVVSSVTDTSANNNLSKCRTLVAVPSINMGALAVVPFRRKSGNHDFSQRRIRRPFSVVEVEALVQAVEKLGTGRWRDVKQCAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWSQQQCKHQLKPM 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1844 574 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 477 536 IPR017930 -
Lal2g1844 574 MobiDBLite consensus disorder prediction 159 178 - -
Lal2g1844 574 MobiDBLite consensus disorder prediction 148 201 - -
Lal2g1844 574 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 574 - -
Lal2g1844 574 ProSiteProfiles Myb-like domain profile. 477 532 IPR001005 -
Lal2g1844 574 CDD SANT_TRF 483 533 - -
Lal2g1844 574 SMART sant 481 534 IPR001005 -
Lal2g1844 574 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 574 IPR031105 -
Lal2g1844 574 SUPERFAMILY Homeodomain-like 483 564 IPR009057 -
Lal2g1844 574 Gene3D - 471 573 - -
Lal2g1844 574 SUPERFAMILY Ubiquitin-like 288 366 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1844 Lal-Chr2 20775352 20780707 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1844 - - gmx:100807254 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1844 2 20775352 20780707 Lal6g0280 6 1840331 1845088 ECH
Lal2g1844 2 20775352 20780707 Lal18g1326 18 15728801 15733075 ECH
Lal2g1844 2 20775352 20780707 Lal22g0270 22 1722372 1727168 ECH
Lal2g1844 2 20775352 20780707 Lal5g1176 5 14519290 14524428 ECH
Lal2g1844 2 20775352 20780707 Lal3g0540 3 4001070 4006535 ECH
Lal2g1844 2 20775352 20780707 Lal2g1844 2 20775352 20780707 ECH
Lal2g1844 2 20775352 20780707 Lal2g0219 2 1279399 1285023 ECH