Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0219 ATGGTGTTGCAGAAGAGTTTAGAATACAGATTTAATGGCTATCAGGTACCAGCCACTGCCCGACGAGCCCGGTCAACTACGAGGAGGGCTAAATTTCAAAGAACGGTGGAAGACAATCAAATGTGTGCATTTGACTTATTGGCCAGCATAGCTGGTAAGTTATTGCAAGAGAAACGGAATCCAACCATTATGACTATTGATACGTCATCAGAAAAGGATCAGAGTGGATCTGTTAAAGAGTGCCAGAATGCAAATAAACTGTTTAAAGCTGAGCTTTCTGATGAAGGAAGTTGTGACAACAAATGTTTCTCTCTTCTTTCGTCCCAAACAAACAATCCAAACTGTTATTTGAGTGAATTCCCAGATCCTGAAATTGATGTGTATCCGGGCATTGCTTCTATAGTAACAAGTTCTAATTCCTTAGAGAGGGTTGTTGCTGACAAATTGGTGGATGGCAAAAGCCAAGATGAAATGGAAAACATTACTAGCAATGCTAAATTAGATTCCCCTGGTTATGCAGAGGATAGTTGTTGCAAGTTAGATGGTGATACAAGTGAAGTAAAGGATGAGCTGCATAAGTTTGAGAACGTGCCAATTGAAAACCCTCCAGCGCTGATCAATTTAGATGGCATTGCTGAGTTGTCTGGGTACAATGATGGTATTCCCTGTAGTTCGTTCTCCAAAGGTTGTGGCAATGTACCTGTAGTTAGTAGAGATGATGACGAAAAAATTTCTGGGTGTTCTCACCCTAGTAGCAAAACAAAGTCCTTTAGGCCAATAATTAGTATAGGTGATAGAGTCAGGAAAACTTTGGCTTCTAAATATTCAAAAGTTGCTCAAGAATCAAAGGTTGATATACTTTCTAACAGTGATGGAGATTTTAAGCCAACTTGCCACAGTAAGAAGTATTGCTATAAACGCCAAAGATCTCAGATGAATATTCCTTTGAAGAAGAGAAAGCTTTTTAATTGTAGTTCTGTTTCAAATTCCGATGGATTTATCAGAAGTGGTGGCATTTATAATTCACCTGAGAGTGATATGAGTCACAATACTTCTTGTTCATCTCCTGGGAGGATGCGAAAAGACCGTGGAATAGAATCATTGGAGGCACATCAACACTCTGCATCACGATGTGGAGGTTCTCACGTGAAGCTTAGGATCAGGTCATTTAGAGTCCCAGAGCTTTTTATTGAGATTCCAGAAACTGCAACTATTGGCTCCTTGAAGAGGACAGTTATGGATGCAGTTACAGCTGTACTTGGAGGTGGGTTACGTGTTGGTGTCAGTCTCCGGGGGAAGAAAGTTAGAGATGACAGTAAAACTCTTATTCAAACTGGAATTTCTCTTGATAGCCATCTGGGTTCTTTGGGTTTCACCCTGGAACCTAAGTCTTCACCAAGCCTACTGCATTTATGTGCTGCACATTCCTCCCATGTTCCCAGTGCAGAGATACCTCAGTCTCCAATAAGGCCAGCTATAATTCATCAGAGGATTCAAGGCAGTTTAGACATGTTACCTGACCATCAAGTAACCAATTTGGGGAATTTTGTTGTAAATGACTATGATTCAACACCTTCTCCCATCAACACATCTGTTGAAAAAGGTAGGACAGATTACAAAGCACTGGATACTGTTCCTGAAATGGGTGAGGATGAATTAGCTATGGTACCTGTGCTCCAGAAGTCAAAGCGATCTGAAATTATGCAGCGCCGAATTCGTAGGCCTTTTTCTGTTGAAGAAGTGGAAACACTGGTTCACGCAGTTGAGAAGCTGGGAACTGGAAGGTGGCGTGATGTTAAAATTCGTGCTTTTGATAATGCTAAGCATCGGACATATGTGGATTTGAAGTTTGCAACTTGCATGTTTTCTTCTTCATCTTTCTACTTGTTATCGGCAAGTGGTTACTTGATTCATAAGCAAGCGGATAAATGGAAAACACTGGTGCACACGGCAAGAATATCCCCTCAGCAGAGAAGGGGAGAACCTGTTCCCCAACAACTTTTGAACAGGGTCCTAATTGCCCATGCATACTGGTCCCAGCACCATCAAGAAACTAGCAATGCCCTTTAA 2070 0.414 MVLQKSLEYRFNGYQVPATARRARSTTRRAKFQRTVEDNQMCAFDLLASIAGKLLQEKRNPTIMTIDTSSEKDQSGSVKECQNANKLFKAELSDEGSCDNKCFSLLSSQTNNPNCYLSEFPDPEIDVYPGIASIVTSSNSLERVVADKLVDGKSQDEMENITSNAKLDSPGYAEDSCCKLDGDTSEVKDELHKFENVPIENPPALINLDGIAELSGYNDGIPCSSFSKGCGNVPVVSRDDDEKISGCSHPSSKTKSFRPIISIGDRVRKTLASKYSKVAQESKVDILSNSDGDFKPTCHSKKYCYKRQRSQMNIPLKKRKLFNCSSVSNSDGFIRSGGIYNSPESDMSHNTSCSSPGRMRKDRGIESLEAHQHSASRCGGSHVKLRIRSFRVPELFIEIPETATIGSLKRTVMDAVTAVLGGGLRVGVSLRGKKVRDDSKTLIQTGISLDSHLGSLGFTLEPKSSPSLLHLCAAHSSHVPSAEIPQSPIRPAIIHQRIQGSLDMLPDHQVTNLGNFVVNDYDSTPSPINTSVEKGRTDYKALDTVPEMGEDELAMVPVLQKSKRSEIMQRRIRRPFSVEEVETLVHAVEKLGTGRWRDVKIRAFDNAKHRTYVDLKFATCMFSSSSFYLLSASGYLIHKQADKWKTLVHTARISPQQRRGEPVPQQLLNRVLIAHAYWSQHHQETSNAL 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0219 689 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 568 616 IPR017930 -
Lal2g0219 689 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 684 IPR031105 -
Lal2g0219 689 SUPERFAMILY Homeodomain-like 570 616 IPR009057 -
Lal2g0219 689 MobiDBLite consensus disorder prediction 339 359 - -
Lal2g0219 689 Gene3D - 639 688 - -
Lal2g0219 689 Gene3D - 561 617 - -
Lal2g0219 689 CDD SANT_TRF 574 649 - -
Lal2g0219 689 MobiDBLite consensus disorder prediction 339 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0219 Lal-Chr2 1279399 1285023 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0219 - - gmx:100797436 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0219 2 1279399 1285023 Lal2g0219 2 1279399 1285023 ECH
Lal2g0219 2 1279399 1285023 Lal6g0280 6 1840331 1845088 ECH
Lal2g0219 2 1279399 1285023 Lal18g1326 18 15728801 15733075 ECH
Lal2g0219 2 1279399 1285023 Lal22g0270 22 1722372 1727168 ECH
Lal2g0219 2 1279399 1285023 Lal5g1176 5 14519290 14524428 ECH
Lal2g0219 2 1279399 1285023 Lal3g0540 3 4001070 4006535 ECH
Lal2g1844 2 20775352 20780707 Lal2g0219 2 1279399 1285023 ECH