Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0280 ATGGTGAAGAGGCTAGATTATGGACTCAGGGGCTTTCAGGTCCCCCCTACTGCTAGACGTCATAGATCTACAAGAAGGAGGGGTCCTTCCAAGAAATCAGCTGAGGATGGCCAAGCTTGTGCTTTTGAACTGCTGGCATCTTTAGCTGGCGAGCTGTTACAGGAGAGTGAAAGTTCTGCTTCTAGCAATGCATCTGAAGCAAATCACCACCCTTCCTTTAGCCACAGTGTTGTTGATAAGGAAAGGAAAGGTGAAGTTAGGCCATTAATGGCAAAAGGAACTCATAATGGAAGTTGTGCAGAGAGTATTATATTTACTGAGATGGAATCACAAAAGAGTAATCAGAAATGTCTTGAACATGCTGAAACTGATTGTATACTACAATGTTTTCCAGTTAATAATAATAGTAATTCAGAGTGTTGGGAGAAAGTTGAAGCTGGTTTGATGTCCAAAAATTGCAAATGGGGGAATAAGTTTGTGCATCATTCTAACAGATTAGTAGAAATACCTGAAGATGTTAGGGAGTCTTCTGATGCTAATGTAAAGAATGGATTTAGGCAGGAACAGGTGGTTAGCAATTCAGGCTTCAAGGGACTGCCTGTGGGTAACAAATTTTGTTTGAAAGACCCATTGGAATTGTGTGTTAACTCTCCTCCACTAATTAACTCAAACAGTAATGTTATATCTCCATTTTGTGGGGATCTGTTTCTCAATGCTTCAATTTCCAGGCATAGGAATAATAATAAGTTAGGCTTTAGAGATGATGACGAAAACTTTTTAAGGTGCAACAGAGTTTGCACCAAGTCAAAGGCTTTTATGCCTCCACAACGCGTTGCACGCCGAAGAATCAGGCAGCTGCTGACTTCCAAACGCTGGAAGGTAGCTCCGAAATTGAAGGATTATCAACATACTAGAACTGAATTTACAGATGAGGGAGTAAAACCCCTGTATCGTAAGAGGAAGAATTGTTATAGTTTTGAAAGATCTCGGCATGGCACTCTTTTCAAGAGGAGGAAATTCTTTGGCCGGAGTTCAGTGATAACTTCTGGTGGAGGATTCAGCTGTGATAGTGTATCTAATTCACCAGATAAAGGAATGGATGGAGACAGCTCTAATTCATCTGAAAAACTGCAAGCCTCTAAGGATTCTCATGTGAAATTTAGCATCAAGTCTTTCAGGATACCAGAACTTTATATTGAGGTCCCCAGAACTTCAACTGTTGGCTCATTAAAGAGGACAGTCAAGGAGGCAGTGATGGGAATGCTTAGAGGTGGAATGCATATTGGTGTTCTTCTTGAGGGGAAAAAGGTTAGAGGTAACAACAGGACTCTTCCGCAGACTGGTATATCTTGTGAAGAAAACCTGGATAAACTTGGTTTTGTGTTGGAGCCCAGTTCTCTGCTAGCTTCTCCAGCTGTTTGTGTTGGTGAGCTTTCTCAATGCAAAACACCTCAACCTACCAGGTCCCCAGAAGCTCATGTTCTAGATTCAGGGATTACTGATGCCTTACCAGATTCCTCCTTTCTGACAAACGCGAGCAACCTTGTTGAAAGTAATCACGAGTTGACATCTATCTCCACTGACACTATAGTTGACAAAATAACAACAGATGCCACAGCAATAGTTACTGTTCCAACTAGGAGCACAAAAGCATTAGCTGTGATTCCGGCTGGTCAGAAAACCAGGCAGTCTGAGCTTGTACAGCGTCGAACCAGGAGACCATTCTCTGTGTCTGAAGTAGAAGGACTTGTTGAGGCAGTTGAGGAACTTGGAACCGGAAGATGGCGTGATGTAAAGTTGCGAGCTTTTGAGAATGCAGACCATCGGACTTATGTAGACTTGAAGGATAAATGGAAAACATTAGTGCACACTGCGAAAATCGCCCCTCAACAGCGGAGAGGAGAGCCAGTCCCTCAGGAACTCTTAGACAGAGTTTTGGCTGCCCATGCTTACTGGTCTCACCACCAAGCCAAGCAGCATGGCATGCATCACCAAGCTAGAACCATGAAAGACACAGTATTGATGGCATCCAACCATATATGA 2043 0.4288 MVKRLDYGLRGFQVPPTARRHRSTRRRGPSKKSAEDGQACAFELLASLAGELLQESESSASSNASEANHHPSFSHSVVDKERKGEVRPLMAKGTHNGSCAESIIFTEMESQKSNQKCLEHAETDCILQCFPVNNNSNSECWEKVEAGLMSKNCKWGNKFVHHSNRLVEIPEDVRESSDANVKNGFRQEQVVSNSGFKGLPVGNKFCLKDPLELCVNSPPLINSNSNVISPFCGDLFLNASISRHRNNNKLGFRDDDENFLRCNRVCTKSKAFMPPQRVARRRIRQLLTSKRWKVAPKLKDYQHTRTEFTDEGVKPLYRKRKNCYSFERSRHGTLFKRRKFFGRSSVITSGGGFSCDSVSNSPDKGMDGDSSNSSEKLQASKDSHVKFSIKSFRIPELYIEVPRTSTVGSLKRTVKEAVMGMLRGGMHIGVLLEGKKVRGNNRTLPQTGISCEENLDKLGFVLEPSSLLASPAVCVGELSQCKTPQPTRSPEAHVLDSGITDALPDSSFLTNASNLVESNHELTSISTDTIVDKITTDATAIVTVPTRSTKALAVIPAGQKTRQSELVQRRTRRPFSVSEVEGLVEAVEELGTGRWRDVKLRAFENADHRTYVDLKDKWKTLVHTAKIAPQQRRGEPVPQELLDRVLAAHAYWSHHQAKQHGMHHQARTMKDTVLMASNHI 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0280 680 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 568 626 IPR017930 -
Lal6g0280 680 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 2 669 - -
Lal6g0280 680 MobiDBLite consensus disorder prediction 357 378 - -
Lal6g0280 680 MobiDBLite consensus disorder prediction 55 81 - -
Lal6g0280 680 SMART sant 571 624 IPR001005 -
Lal6g0280 680 ProSiteProfiles Myb-like domain profile. 567 622 IPR001005 -
Lal6g0280 680 PANTHER TELOMERIC REPEAT BINDING PROTEIN 2 669 IPR031105 -
Lal6g0280 680 CDD SANT_TRF 573 623 - -
Lal6g0280 680 MobiDBLite consensus disorder prediction 357 379 - -
Lal6g0280 680 Gene3D - 560 664 - -
Lal6g0280 680 MobiDBLite consensus disorder prediction 1 36 - -
Lal6g0280 680 SUPERFAMILY Homeodomain-like 573 653 IPR009057 -
Lal6g0280 680 MobiDBLite consensus disorder prediction 55 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0280 Lal-Chr6 1840331 1845088 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0280 - - lang:109356744 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0280 6 1840331 1845088 Lal18g1326 18 15728801 15733075 ECH
Lal2g1844 2 20775352 20780707 Lal6g0280 6 1840331 1845088 ECH
Lal2g0219 2 1279399 1285023 Lal6g0280 6 1840331 1845088 ECH
Lal6g0280 6 1840331 1845088 Lal6g0280 6 1840331 1845088 ECH