Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1326 ATGAAATATTTAAAAGTGAAATATTTAATATTAAAAAATAAGCTAGTTGACGTCAATACGAATTCCCGGTTCATTGTTTTCGTCGCAAATGGTTTTACTCGTAAATTTCGTTCCTTGATCGCAATTAATCAGTGGCAAGGATCTGGCATACTAATGCTTCTGAGGCTAGATTATGGGTTCAGGGGCTTTCAGGTCCCCCCTACAGCTAGACGTCCTAGATCTACAAGAAGGAGGGGTCATTCTGAGAAATCATCCGAGGGTGGCCAAGCTTGTGCTTTTGAATTGCTGGCGTCTTTAGCTGGCAAGTTGTTACAGGAGAGTGAAAGTTCTGCTTCTAGCAATGCAATCGAAGGAAATCATCACCATGGCTTTAGCCACAGTGTTGTTGAGAAGGAAAGGCAAGATGAAGTTAGTCCATTAATTGCAAAAGGAGTCCATAATGGAAGTTGTGCAGAGAGTATTTTTACGACTGAGATGGAATCCAAAAAGAGTAGTCAGAAATGTTTTGAACATGCTGAGACTGATTGTGTTGTAGAATGTGTTTCAGTTAATAATAATTGTAATTCAGAGTGTAGGGAAAAGATTGAAGCTCATGTGAATTCCAAAAATTTAGGATGGGAGAATAAGTTTGTGCATAATTCTAATAGATTGGTAGAAATACCCGAAGATGTTAGGGAGTCTTGTGATGCTAATATAAAGAATGGATTTAGGCGGGAACCGGAGGCTAGCAATTCAGGCGTCAAGGAATTAACTTTGGATAATAAATTTAGTTTGAAAGACCCATTGGAATTGTGTATTAACTCTCCTGCACTAATTGACTCGAACAATGATGTTAGATCTCCATTTTGTGGGGAGTTGTTTCCCAAAGCTTCCCTTTCCAGGCATGGGAATAATAATAGGTTAGGTTTTAGAGATGATGACGAAAACTTTTTAAGGCGCAATAAAGTTCGCACCAAGTCAAAGGCTTTTAGGCCTCCACAACGCGTTGCATGCCGAAGAATCAGGCAGATGCTGACTTCCAAACACCGGAAGGTAGCTCCAAATTTGAAGGATTATGGGCATTCTAGAACTGATGGTGGAGTAAAGCCCCTGTACCGTAAGAGGAAGACTTGTTATAGTTTTGAAAGATCTCGGCATAGCTCTCTTTTCAAGAGGAGGAAATTCTTTGGCCGGAGTATAGTGATAACTTCTGATGGAGGAGTCAGCAGTGATAGTGTATCTAATTCACCAAATAAAGGAATGGATGGAGACAACTCTAACTCATCTGCAAAACTTTATGTATCTAAGGATTCTCATGTGAAATTTAGTATCAAGTCTTTCAGGATACCACGACTGTATGTCGAGGTCCCCAGAGCTGCAACCGTTGGTTCATTAAAGAGGACAGTCAAGGAGGCACTGATGGCAATGCTTGGAGGTGGAGTGCATGTCGGTGTTCTTCTTCATGGAAAAAAGGTTAGAGATGACAACAGAACTCTTCGGCAGACTGGTATATCCTGTGAACAAAGCCATGATAAACTTGGTTTTGTGTTGGAGCCCAGTTCTTCGCAAGCTTCTCCAGCTGTTTGTGTTGGTGAGCCTTCTCGATGCAAAACATCTCAACCTACCAGGTCACGAGAAGCTCATGTTCTAGATTCAGGGATTACTGATGCCTTACAAGACTCCTCCTTACTGACAAACACAGGCAACCTCGTTGAAAGTAATCATGATTCGACTTCTTTCTCGACTGACACTTTAGCTGACAAAATAACAACAGATGCCAGAGCGCTAGTTACTTTTCCAACTAGGAGCATAGAAGCATTAGCTGTGGTTCCTGCGGGTCAGAAAACCAGGCAGTCTGAGTTTGTACAGCGTCGAACCAGGAGACCATTCTCTGTGTCTGAAGTAGAAGCACTCGTTGAAGCAGTTGAGGAACTTGGAACCGGAAGGTGGCGTGATGTAAAGTTGCGAGCTTTTGAGAATGCAGACCACAGGACTTATGTTGACTTGAAGGATAAGTGGAAAACATTAGTGCACACTGCAAAAATCGGGCCGCAACAGCGGAGAGGAGAGCCAGTCCCTGAGGAGCTGTTGGACAGAGTTTTGGCTGCCCATGCTTACTGGTCTAACCACCAAGCCAAGGTCCCCAAGCTGGAACCATGA 2139 0.4273 MKYLKVKYLILKNKLVDVNTNSRFIVFVANGFTRKFRSLIAINQWQGSGILMLLRLDYGFRGFQVPPTARRPRSTRRRGHSEKSSEGGQACAFELLASLAGKLLQESESSASSNAIEGNHHHGFSHSVVEKERQDEVSPLIAKGVHNGSCAESIFTTEMESKKSSQKCFEHAETDCVVECVSVNNNCNSECREKIEAHVNSKNLGWENKFVHNSNRLVEIPEDVRESCDANIKNGFRREPEASNSGVKELTLDNKFSLKDPLELCINSPALIDSNNDVRSPFCGELFPKASLSRHGNNNRLGFRDDDENFLRRNKVRTKSKAFRPPQRVACRRIRQMLTSKHRKVAPNLKDYGHSRTDGGVKPLYRKRKTCYSFERSRHSSLFKRRKFFGRSIVITSDGGVSSDSVSNSPNKGMDGDNSNSSAKLYVSKDSHVKFSIKSFRIPRLYVEVPRAATVGSLKRTVKEALMAMLGGGVHVGVLLHGKKVRDDNRTLRQTGISCEQSHDKLGFVLEPSSSQASPAVCVGEPSRCKTSQPTRSREAHVLDSGITDALQDSSLLTNTGNLVESNHDSTSFSTDTLADKITTDARALVTFPTRSIEALAVVPAGQKTRQSEFVQRRTRRPFSVSEVEALVEAVEELGTGRWRDVKLRAFENADHRTYVDLKDKWKTLVHTAKIGPQQRRGEPVPEELLDRVLAAHAYWSNHQAKVPKLEP 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1326 712 Gene3D - 608 711 - -
Lal18g1326 712 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 616 674 IPR017930 -
Lal18g1326 712 SUPERFAMILY Homeodomain-like 621 701 IPR009057 -
Lal18g1326 712 SMART sant 619 672 IPR001005 -
Lal18g1326 712 MobiDBLite consensus disorder prediction 110 129 - -
Lal18g1326 712 MobiDBLite consensus disorder prediction 67 88 - -
Lal18g1326 712 ProSiteProfiles Myb-like domain profile. 615 670 IPR001005 -
Lal18g1326 712 PANTHER TELOMERIC REPEAT BINDING PROTEIN 54 706 IPR031105 -
Lal18g1326 712 MobiDBLite consensus disorder prediction 399 420 - -
Lal18g1326 712 CDD SANT_TRF 621 671 - -
Lal18g1326 712 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 54 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1326 Lal-Chr18 15728801 15733075 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1326 - - lang:109356744 965.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0280 6 1840331 1845088 Lal18g1326 18 15728801 15733075 ECH
Lal2g1844 2 20775352 20780707 Lal18g1326 18 15728801 15733075 ECH
Lal2g0219 2 1279399 1285023 Lal18g1326 18 15728801 15733075 ECH
Lal18g1326 18 15728801 15733075 Lal18g1326 18 15728801 15733075 ECH
Lal3g0540 3 4001070 4006535 Lal18g1326 18 15728801 15733075 LSH
Lal5g1176 5 14519290 14524428 Lal18g1326 18 15728801 15733075 LSH