Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0270 ATGTATGTTCGTGCTATGATGGAGAGGCTAGATTATGGATTCAGGGGCTTTCAGGTCCCCCCGACAGCTAGGCGTCCTAGATCTACAAGACGGAGGGGTCCTTCCAAGAAATCAGCTGAGGTTGGCCAAGTTTGTGCCTTTGAACTGCTGGCAACTCTGGCTGGAAAGTTGTTACAGGACAGTGAAAGTTCTGCTTCTAGCAATGCATCTGAAGGAATGAATCACCCTGCCTTTAGCCAAAGTGTTGTTGAGAAGGAAAGGCAAGATGAAGTTAAACCGTTAAAGGCGAAGGGAATTCATAATGGAAGTTGTGCAGAGTGTACTGTTAAGACTGAGATGGAATCACAAAGGAGTATTCAGAAATGTCTTGAACATGCTGAGACTGATTGTATTCTAGAATGTGTTTCAGTTAATGATAATAGTTGTTCAGACTGTTGGGAAAAAGTTGAAGCTGAAGTGAAGTCCAAAAGGTTTAGATGGGAGAATAAGTTTGAGCATCATTCTAATAGATTAGTAGAAATACCCGAAGATGTTAGGGAGTCCTGTGATGGTGTTATAAAGAATGGATTTAGGCAGGAACAAGAGACTAGCAACTCAGGCTTCATGGCATCACCTTTGAATAATAATTTTATTTTTAAAGAACCTTTGGATTTGTGTATTAATTCACCTGCACTATTTGACTCGAACAGTAATATTAAATCTCCATTTTCTGGGGGATTGTTTCCCAGTGCTTCCTTTTCCAGGCATGGGAATGATAATAAGTTAGGTTTTAGAGATGATGACGAAAACTTTTTACGGTGGAACAGAGTTTGGACCAAGTCGAAAGCTTTTAAGCCTCCACAACGCTGCCGAAGAATTAGGAAGCTGGCGACTTCCAAGTGCTGGAAAGTAGCTCCAAACTTGAAGGACTGTAAACATTCTAGAACTGACGAGGGGGTAATACCCCCGTATCGTAAGAGGAAGACTTGTTATAGTTTTGTTAGATATCGGCATGGCTCTCTTTTCAAGAGAAGGAAATACTTTGGTTGGGGTTCAGTGATAACTTCTGATGGGGGATTCAGCAGTGATAGTGTATCTAATTCACCAGATAAAGGAATGGATGGAGACAACCTTAACTCATCTGCAAAATTGCATGTATCTAAAGATTCTCATGTGAAGTTTAGCATAAAGTCTTTCAGGATACCAGAACTTTATATTGAGGTGCCTAAAACTGCAACCGTTGGCTCATTAAAGAGGAAAGTCAAGGAGACAGTGATGGCAATGCTTGAAGGTGGACTGCATGTTGGTGTTCTTCTTCAGGGAAAAAAGGTTAGAGATGACAACAGAACTCTTCGGCAGAGTGGTATTTCTTGTGAAGAAAGTCTGGATAAACTCGGTTTCATGCTGGAGCCCAGTTCCATGCAAGATTCCCCATTAGTTTGTGTTGGTGATCCTTCTCCATGCAAAACTTCTCAGCCTGTCAGGTCCCCCGAAACTCCTGCATTAGATTCAGCGATTACCAATGCCTTACATGACTCCTTGCTGACAAATAATGTGAACCTTGTTGAAAGTAATCATGACTCAAATTCTTTCTCCACTGACCCTATAGCTGACAAAATAACAACAGATTCCAGAACGCTAGTTACTGTTCCAACTAGGAGCGCAGAAGCATTAGCTGTGGTTCCTGTGGGTCAGAAAACCAGACACTCTGAGCTTGTACAGCGTCGAACCAGGAGACCATTCTCTGTTTCTGAAGTAGAAGCACTTGTCGAAGCAGTTGAGGAACTTGGAACCGGAAGGTTTGATGTTTATCAGCTTCACATGTACATAGACAGGAAAACTTGGCTTTTGACAATGTTTTCATGGCGCAGGTGGCGTGATGTAAAGTTGCGAGCTTTTGAGAATGCAGACCATAGGACTTATGTTGACTTGAAGGATAAATGGAAAACATTAGTGCACACTGCAAAGATTTGTCCTCAACAGAGGAGAGGAGAGGCAGTCCCTCAGATTCTCTTGGACAGAGTTTTAGCTTCACATGCTTACTGGTCTCACCACCAAGCCAAACAGCATACCAAGCATCACCAAATTGTAACAATGAATGACACAGTGTTGATGGCATCCAACCACATGTGA 2112 0.4223 MYVRAMMERLDYGFRGFQVPPTARRPRSTRRRGPSKKSAEVGQVCAFELLATLAGKLLQDSESSASSNASEGMNHPAFSQSVVEKERQDEVKPLKAKGIHNGSCAECTVKTEMESQRSIQKCLEHAETDCILECVSVNDNSCSDCWEKVEAEVKSKRFRWENKFEHHSNRLVEIPEDVRESCDGVIKNGFRQEQETSNSGFMASPLNNNFIFKEPLDLCINSPALFDSNSNIKSPFSGGLFPSASFSRHGNDNKLGFRDDDENFLRWNRVWTKSKAFKPPQRCRRIRKLATSKCWKVAPNLKDCKHSRTDEGVIPPYRKRKTCYSFVRYRHGSLFKRRKYFGWGSVITSDGGFSSDSVSNSPDKGMDGDNLNSSAKLHVSKDSHVKFSIKSFRIPELYIEVPKTATVGSLKRKVKETVMAMLEGGLHVGVLLQGKKVRDDNRTLRQSGISCEESLDKLGFMLEPSSMQDSPLVCVGDPSPCKTSQPVRSPETPALDSAITNALHDSLLTNNVNLVESNHDSNSFSTDPIADKITTDSRTLVTVPTRSAEALAVVPVGQKTRHSELVQRRTRRPFSVSEVEALVEAVEELGTGRFDVYQLHMYIDRKTWLLTMFSWRRWRDVKLRAFENADHRTYVDLKDKWKTLVHTAKICPQQRRGEAVPQILLDRVLASHAYWSHHQAKQHTKHHQIVTMNDTVLMASNHM 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0270 703 SMART sant 570 647 IPR001005 -
Lal22g0270 703 MobiDBLite consensus disorder prediction 62 77 - -
Lal22g0270 703 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 7 601 - -
Lal22g0270 703 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 617 688 - -
Lal22g0270 703 PANTHER TELOMERIC REPEAT BINDING PROTEIN 7 601 IPR031105 -
Lal22g0270 703 PANTHER TELOMERIC REPEAT BINDING PROTEIN 617 688 IPR031105 -
Lal22g0270 703 SUPERFAMILY Homeodomain-like 572 676 IPR009057 -
Lal22g0270 703 Gene3D - 559 604 - -
Lal22g0270 703 Gene3D - 611 687 - -
Lal22g0270 703 ProSiteProfiles Myb-like domain profile. 566 645 IPR001005 -
Lal22g0270 703 SUPERFAMILY Ubiquitin-like 381 456 IPR029071 -
Lal22g0270 703 MobiDBLite consensus disorder prediction 17 39 - -
Lal22g0270 703 CDD SANT_TRF 572 646 - -
Lal22g0270 703 MobiDBLite consensus disorder prediction 62 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0270 Lal-Chr22 1722372 1727168 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0270 - - lang:109356744 1164.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0270 22 1722372 1727168 Lal5g1176 5 14519290 14524428 ECH
Lal2g1844 2 20775352 20780707 Lal22g0270 22 1722372 1727168 ECH
Lal2g0219 2 1279399 1285023 Lal22g0270 22 1722372 1727168 ECH
Lal22g0270 22 1722372 1727168 Lal22g0270 22 1722372 1727168 ECH