Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1714 ATGGAGAATCAGCATGGAACAAAGATTAATACTGAGAAATTCACTTGGATAATTGAAAGTTTCTCAAAGAACAACACCAAGAAACTTCAGTCCAAGTCTTTTGTTATTGGTGGTTGTAGATGGAGGATAGTTATGGAACCAATAGAAAAAGGTGTGGAACATTTATCATTGTGTTTGAAGATTTCAGGTCCTATACCAGAATTTGGATGCAGCAAATTTGCTTATTTGGAATTATCTCTTATTAACCAAATGGATAGTGAGAAATCAATTGTAAAAGAGACTCGATATAAGTTCGATTCAAGATATCGAATTTGGAGTTCATCATTCATACATCTCAGCGACTTTTATAATCCGAAACAAGGATATCTCATAAATGGTCATTGCATTATTGCAGCCAATGTTACTGTCTCAGATAATGCATTTGAAGTTACTACTAAATCTCAGGAAGATTTTGGAGTTGTGATTCCACCCTCAGAAGGGACAACTAGTCCTAAGCAAGTACATTTTGAAGAGACAAAAAGTCCTAAACCATCTTTGTACCCTTCTATATATGATGATGGACTTAAGGAAGTGCCCTTAATCCATCTAAGTGATGTCCTAGATATCAATAGTTTAGGACCAGAAGAAGCATATTTTTTCCCACTTTTAGAAGAGGCTTGTTTATGCCATCCTTCATTGATAGAAAGCCAGATGAAAAAAAGTTCTAAGTACATTCTATGGGCATTCACATCTTTGGGTCAAGTCCTACATTTCCTTAAGACAACGAAGGCGAAAAATATCGACGAGGAAGCGTGCGAAAACCTCGAATGTCTATGGGAAGAAGTTAAGTTGTTTGGTTTTGACTTAACTTGGCTAGAACCATATATTCTATCAGCATTGGATGTTAAAGCATACTTGGAAAAAGCTGAAAAAGTGAAAAATCTGAAAGAGGGTGTTGTTGATTTGGAGATTGAAGTGAGGAATCTAAGAACAAAACTAGCTTTTGCAGAAGTAGAAGTTGATATAGCAAGAAGGGACTTAGAAGAAATAGAAAAGGGTTTTGAAGAAAGGGACATTGATGCAGAACTTGGTTATGAGATATAA 1083 0.3555 MENQHGTKINTEKFTWIIESFSKNNTKKLQSKSFVIGGCRWRIVMEPIEKGVEHLSLCLKISGPIPEFGCSKFAYLELSLINQMDSEKSIVKETRYKFDSRYRIWSSSFIHLSDFYNPKQGYLINGHCIIAANVTVSDNAFEVTTKSQEDFGVVIPPSEGTTSPKQVHFEETKSPKPSLYPSIYDDGLKEVPLIHLSDVLDINSLGPEEAYFFPLLEEACLCHPSLIESQMKKSSKYILWAFTSLGQVLHFLKTTKAKNIDEEACENLECLWEEVKLFGFDLTWLEPYILSALDVKAYLEKAEKVKNLKEGVVDLEIEVRNLRTKLAFAEVEVDIARRDLEEIEKGFEERDIDAELGYEI 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1714 360 ProSiteProfiles MATH/TRAF domain profile. 11 134 IPR002083 GO:0005515
Lal1g1714 360 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 6 341 - -
Lal1g1714 360 Coils Coil 305 346 - -
Lal1g1714 360 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 6 341 - -
Lal1g1714 360 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 2 141 IPR008974 GO:0005515
Lal1g1714 360 CDD MATH 13 135 IPR002083 GO:0005515
Lal1g1714 360 SUPERFAMILY TRAF domain-like 11 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1714 Lal-Chr1 19575554 19577523 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1714 - - lang:109347098 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1714 1 19575554 19577523 Lal13g0880 13 6047863 6076984 ECH
Lal1g1714 1 19575554 19577523 Lal24g0695 24 5158719 5184887 ECH
Lal1g1714 1 19575554 19577523 Lal1g1714 1 19575554 19577523 ECH
Lal1g1714 1 19575554 19577523 Lal18g1444 18 16489215 16503167 ECH
Lal1g1714 1 19575554 19577523 Lal6g0181 6 1248885 1263611 ECH
Lal1g1714 1 19575554 19577523 Lal20g0218 20 1529160 1531923 LSH
Lal13g1253 13 10934455 10936525 Lal1g1714 1 19575554 19577523 PCT