Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00225 ATGTCAATTGCTTTGAGTTCAGTTTGCAAAGAGAAGGTAAACTGGGAAGGGCAACCAGGACATTGTTCTGGTGAACCAATCTTGATTTACCTCACTGTGGATGGTGCTGTGACCCCAATGCGTGTGTTGGAGTCTGATTCCATCGCTTCGGTGAAACTGAGGATTCAACAGTGCAAAGGCTTCGTGGTGAAGAAGCAGAAGCTGGTTTTCAGTGGCAGAGAGCTAGCTCGCAATGGCACCCTCATTAAGGAATATGGTGTCACTGATGGTAATGTTCTTCACTTGGTTCTTCGGCTCTCTGATCTTCTCTTCATTGTTGTGAGGACCGTCTCTGGGAAGGAGTTCGAGTTCCACATCGACAGACACCGAAATGTGGGGTATCTGAAGCAACGCATTAGAAAGAACAAAGGGGAATGTTTCATTGATCTTGAGGATGATGATCAAGAGTTTTTCTGCAATGATCAGAAGCTCGATGACGATAGTCTCTTCCATGACATATGCAAGAGTGGTGATGATGTGATTCATTTGATAATTAAGAAATCCGTTAAGGTTAGGACCACACCAATTCACAAGGACTTGAATCTCTCGGTGGTGGCACCAGGTGAAAGTGTGAAACATAAAAGGGACAAACATGTTCAGATAGCAAAGGTGCCACCTGATGTAGGTTTCTGGTTGGAGCCAATTATTGTGAATCCTAAGATCATTTTTTTTCCTTTCCTTTGGGACATGGTAAAGTCCACATTTGAAGGTTTGAAGAAAGGAAATCACCCCGTTAGGTCCTCTGAGGGCACTGGAGGGACATACTTGATGCAAGATTCAACAGGCCAGGAGCATGTTTCGGTTTTCAAGCCCATGGATGAGGAACCAATGGCTGTGAACAACCCAAAAGGTCTTCCGAATTCATCCAATGGTGAAGGTTTGAAAAGAGGGACAAAGGTTGGAGAAGGAGCCTTTAGGGAAGTTGCAGCTTATTTATTGGATCATCCCAAGAGTGGACCGCGTTTGGCGTCAGGTGAAGCTGTAGGATTCTCTGGTGTTCCCCCTACTGTTATGGTGCAGTGCTTGCACCAAGAATTTAACCACCCAAATGGGTTTGCTTCCTCCTCAAAACATGTTAAGATTGGGTCACTGCAGAAGTTCATTAGTAATGATGGTAATTGTGAGGACTATGGACCCTCGGCTTTCCCAGTGGAGGAGGTGCATAAGATTGCTGTACTTGATATAAGATTGGCTAATGCAGACAGGCATGCTGGGAATATATTGATCAAAAAGGAGGCAGATGGCCAGATAAAGCTCATTCCTATTGATCATGGCTATTGTCTACCAGATAAATTTGAAGATTGCACATTTGATTGGCTTTACTGGCCACAAGTACGTCAGCCTTACTCTCCTGAGACTGTGAATTATATAAATTCTCTGGATGCTGAAAAAGACTTGGAACTTTTGAAATGTTATGGATGGGATATTCCACTTGAGTGTGCAAGAACACTTCGCATTTCCACAATGTTGCTGAAGAAAGGGGTTGAAAGAGGCCTTACACCCTATGCAATTGGAAGCATTATGTGTCGGGAAAATTTGAACAAGGAATCTGTCATTGAAGAAATTATTGGGGAAGCCCAAGATTCCTTGCTTCCTGGCATGGAGGAATCAGCATTTCTTGAAGCCATCTCCCAAATCATGGATTACCACCTTGATAAGCTTGCAAACTAG 1710 0.438 MSIALSSVCKEKVNWEGQPGHCSGEPILIYLTVDGAVTPMRVLESDSIASVKLRIQQCKGFVVKKQKLVFSGRELARNGTLIKEYGVTDGNVLHLVLRLSDLLFIVVRTVSGKEFEFHIDRHRNVGYLKQRIRKNKGECFIDLEDDDQEFFCNDQKLDDDSLFHDICKSGDDVIHLIIKKSVKVRTTPIHKDLNLSVVAPGESVKHKRDKHVQIAKVPPDVGFWLEPIIVNPKIIFFPFLWDMVKSTFEGLKKGNHPVRSSEGTGGTYLMQDSTGQEHVSVFKPMDEEPMAVNNPKGLPNSSNGEGLKRGTKVGEGAFREVAAYLLDHPKSGPRLASGEAVGFSGVPPTVMVQCLHQEFNHPNGFASSSKHVKIGSLQKFISNDGNCEDYGPSAFPVEEVHKIAVLDIRLANADRHAGNILIKKEADGQIKLIPIDHGYCLPDKFEDCTFDWLYWPQVRQPYSPETVNYINSLDAEKDLELLKCYGWDIPLECARTLRISTMLLKKGVERGLTPYAIGSIMCRENLNKESVIEEIIGEAQDSLLPGMEESAFLEAISQIMDYHLDKLAN 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00225 569 SUPERFAMILY Protein kinase-like (PK-like) 409 567 IPR011009 -
Gma08g00225 569 Gene3D - 104 194 - -
Gma08g00225 569 ProSiteProfiles Ubiquitin domain profile. 103 180 IPR000626 GO:0005515
Gma08g00225 569 CDD Ubl_ubiquitin_like 105 177 - -
Gma08g00225 569 MobiDBLite consensus disorder prediction 288 307 - -
Gma08g00225 569 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 2 568 - -
Gma08g00225 569 SUPERFAMILY Ubiquitin-like 31 100 IPR029071 -
Gma08g00225 569 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 254 551 IPR000403 -
Gma08g00225 569 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 568 IPR044571 -
Gma08g00225 569 Pfam Phosphatidylinositol 3- and 4-kinase 263 516 IPR000403 -
Gma08g00225 569 ProSiteProfiles Ubiquitin domain profile. 29 98 IPR000626 GO:0005515
Gma08g00225 569 SUPERFAMILY Ubiquitin-like 99 180 IPR029071 -
Gma08g00225 569 Pfam Ubiquitin family 33 99 IPR000626 GO:0005515
Gma08g00225 569 Gene3D - 31 101 - -
Gma08g00225 569 SMART ubq_7 103 179 IPR000626 GO:0005515
Gma08g00225 569 SMART ubq_7 27 98 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00225 Gma-Chr8 1915950 1918371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00225 2 568 Acyl Lipid Metabolism Gene Families AT5G24240 56.894 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00225 - - gmx:100782882 1155.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00225 08 1915950 1918371 Gma08g00225 08 1915950 1918371 ECH
Gma08g00225 08 1915950 1918371 Gma07g00518 07 4971510 4974782 ECH
Gma08g00225 08 1915950 1918371 Gma03g02368 03 48816258 48818197 ECH
Gma08g00225 08 1915950 1918371 Gma19g02412 19 52623381 52626113 ECH
Gma08g00225 08 1915950 1918371 Gma16g00217 16 2355877 2359468 ECH
Gma05g02119 05 42399490 42401751 Gma08g00225 08 1915950 1918371 GST
Gma01g02264 01 57799813 57802839 Gma08g00225 08 1915950 1918371 PCT
Gma11g00150 11 1171052 1172487 Gma08g00225 08 1915950 1918371 PCT