Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02119 ATGTCAATTGCTTTGAGTTCAGTTTGCAAAGAAAAGGTACATTGGGAAGGGCAACCAGGACATTGTTCTGGCGAGCCAATCTTGATTTACCTCACAGTGGATGGTGCTGTGACCCCAATGCGTGTGTTGGAGTCTGATTCCATTGCTTCGGTGAAACTGAGGATTCAGCAGTGCAAAGGCTTCGTGGTGAAGAAGCAGAAGCTGGTTTTTAGTGGCAGAGAGCTAGCTCGCAATGGCACCCTCATCAAGGAGTATGGTGTCACCGATGGCAATGTTCTTCACTTGGTTCTTCGCCTCTCTGATCTTCTCTTCATTGTTGTGAGGACCGTTTCTGGGAAGGAGTTCGAGTTCCACATCGATAGACACCGGAATGTGGGGTATCTGAAGCAACGCATTAGAAAGAAGAAAGGGGAAGGTTTCATTGATCTTGAGGATGATCAAGAGCTTTTCTGCAATGATGAGAAGCTCGATGACCAGAGTCTCTTCCATGACATATGCAAGAGTGATGATGATGTGATTCATTTGATAATTAAGAAATCGGCTAAGGTTAGGACCACACCAATTCACAAGGATTTGAATCTCTCGGTGGAGGCACCAGCTAAGAGAGTAAAACATAAATGGGAAAAACATGTTCAGATAGCAAAGGTGCCACCTGATGTAGGTTTCTGGTTGGAGCCAATTATTGTGAACCCTAAGATCAATTTTTTTCCTTTCCTTTGGGACATGATAAACTCCACATTTGAAGGTTTGAAGAAAGGAAATCACCCTATTAGGTCCTCTGAGGGCACTGGAGGGACATACTTGATGCGAGATTCAACAGGTCAGGAGCATGTTTCGGTTTTCAAGCCCATGGATGAGGAACCAATGGCTGTGAATAACCCAAGAGGTCTTCCAAATTCATCTAATGGTGAAGGTTTGAAAAGAGGGACAAAGGTTGGAGAAGGAGCCTTGAGGGAAGTTGCAGCTTATTTATTGGATCATCCCAAGAGTGGACCGCGTTTGGCGTCCGGTGAAGCAGTGGGGTTCTCTGGTGTTCCCCCTTCTGTTATGGTGCAGTGCTTGCACCAAGAATTTAACCACCCAAATGGGTTTGCTTGCTCCTCAAAACATGTTAAGATTGGGTCACTGCAGAAGTTCATGAGTAATGATGGTAATTGTGAGGACTATGGACCCTCGGCATTCCCAGTGGAGGAGGTGCATAAGATTGCTGTGCTTGATATAAGATTGGCTAATGCAGACAGGCATGCTGGGAATATATTGATCAGAAAGGAGGCAGATGGCCAGATAAAGCTCATTCCTATTGATCATGGCTATTGTCTACCAGATAAATTTGAAGATTGCTCATTTGATTGGCTTTACTGGCCACAAGCACGTCAGCCTTACTCTCCTGAGACTGTGGATTACATCAATTCTCTGGATGCTGAAAAAGACTTGGAACTTTTGAAATGTTATGGATGGGATATTCCACTTGAGTGTGCTAGAACACTTCGCATTTCCACAATGCTACTAAAGAAAGGGGTTGAAAGAGGCCTTACTCCCTATGCAATTGGAAGCATTATGTGTCGGGAAAATTTGAACAAGGAATCTGTCATTGAAGAAATTATTGGGGAAGCCCAAGATTCCTTGCTTCCTGGCATGGAGGAATCGGCATTTCTTGAAGCCATCTCCCAAATCATGGATTACCACCTTGATAAGCTTGCAAACTAG 1707 0.4441 MSIALSSVCKEKVHWEGQPGHCSGEPILIYLTVDGAVTPMRVLESDSIASVKLRIQQCKGFVVKKQKLVFSGRELARNGTLIKEYGVTDGNVLHLVLRLSDLLFIVVRTVSGKEFEFHIDRHRNVGYLKQRIRKKKGEGFIDLEDDQELFCNDEKLDDQSLFHDICKSDDDVIHLIIKKSAKVRTTPIHKDLNLSVEAPAKRVKHKWEKHVQIAKVPPDVGFWLEPIIVNPKINFFPFLWDMINSTFEGLKKGNHPIRSSEGTGGTYLMRDSTGQEHVSVFKPMDEEPMAVNNPRGLPNSSNGEGLKRGTKVGEGALREVAAYLLDHPKSGPRLASGEAVGFSGVPPSVMVQCLHQEFNHPNGFACSSKHVKIGSLQKFMSNDGNCEDYGPSAFPVEEVHKIAVLDIRLANADRHAGNILIRKEADGQIKLIPIDHGYCLPDKFEDCSFDWLYWPQARQPYSPETVDYINSLDAEKDLELLKCYGWDIPLECARTLRISTMLLKKGVERGLTPYAIGSIMCRENLNKESVIEEIIGEAQDSLLPGMEESAFLEAISQIMDYHLDKLAN 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02119 568 SUPERFAMILY Ubiquitin-like 99 179 IPR029071 -
Gma05g02119 568 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 567 IPR044571 -
Gma05g02119 568 Pfam Phosphatidylinositol 3- and 4-kinase 262 515 IPR000403 -
Gma05g02119 568 Gene3D - 31 101 - -
Gma05g02119 568 SUPERFAMILY Ubiquitin-like 31 100 IPR029071 -
Gma05g02119 568 ProSiteProfiles Ubiquitin domain profile. 103 182 IPR000626 GO:0005515
Gma05g02119 568 SUPERFAMILY Protein kinase-like (PK-like) 408 566 IPR011009 -
Gma05g02119 568 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 2 567 - -
Gma05g02119 568 CDD Ubl_ubiquitin_like 105 176 - -
Gma05g02119 568 ProSiteProfiles Ubiquitin domain profile. 29 98 IPR000626 GO:0005515
Gma05g02119 568 Gene3D - 104 219 - -
Gma05g02119 568 Pfam Ubiquitin family 105 179 IPR000626 GO:0005515
Gma05g02119 568 Pfam Ubiquitin family 33 99 IPR000626 GO:0005515
Gma05g02119 568 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 253 550 IPR000403 -
Gma05g02119 568 SMART ubq_7 27 98 IPR000626 GO:0005515
Gma05g02119 568 SMART ubq_7 103 178 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02119 Gma-Chr5 42399490 42401751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02119 2 567 Acyl Lipid Metabolism Gene Families AT5G24240 57.168 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02119 - - gmx:100809172 1153.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02119 05 42399490 42401751 Gma05g02119 05 42399490 42401751 ECH
Gma05g02119 05 42399490 42401751 Gma07g00518 07 4971510 4974782 ECH
Gma05g02119 05 42399490 42401751 Gma03g02368 03 48816258 48818197 ECH
Gma05g02119 05 42399490 42401751 Gma19g02412 19 52623381 52626113 ECH
Gma05g02119 05 42399490 42401751 Gma16g00217 16 2355877 2359468 ECH
Gma05g02119 05 42399490 42401751 Gma08g00225 08 1915950 1918371 GST
Gma01g02264 01 57799813 57802839 Gma05g02119 05 42399490 42401751 PCT
Gma11g00150 11 1171052 1172487 Gma05g02119 05 42399490 42401751 PCT