Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02264 ATGTCGGTTTCTGAGGTTGCTGTGAGACCGATTTTGAAAAAATCGGTGCATTGGCAAGGGCGTTGCTCTGGCGAATCTATCCGGATATATCTAACCGTAGACGGTGCGTTGAGACCAATGCGTGTATTGGAGTCTGACTCCATAGCTTCGGTGAAAATGAGGATTCAAGCATGCAAAGGAATCGCAGGGAAGAAGCACAAGCTGGTCTATGGTGGCAGAGAGCTTGCCCGCAAGGATGCACTCATCAAGGATTACGGTGTCACTGCTGGCAATGTTCTTCACTTGGTTCTCCGTCTCTCTGACATGATCTTCATTGTTGTGAGGACTGCCTGTGGGAAGGAGTTTGAGTTTCAGATTGATAGACATAGAAATGTGGGGTATCTTAAGCAACGCATCAAGAAGAAGAAGGGAGAAGGTTTCATTGACCTTGAGGGTGATCAAGAGCTTTTCTGTGGTGGGGAAGAGCTCCATGACCAGAGGCTCTTCCGTGATATATGCAACACTGATGATGCTGATGGTGTCATTCATTTGGTGGTTCGAAATTCAGCAAAGGTTAATGCCAAACCAGTTCACAAGGATTTGGAGCTTTCGGTTGTTGCTGATGGCTCTGCTGAGGGAGAGAAAGAGAATCAGGTGACACCAAAGATACCACCACCTGGTTTAGATTTCTGGTTGGAACCAGTTTTTGTAAATCCTAAGGTCAGTTTTTTTCCTTTTCTTTGGGACTTGATTGGCTCCACATTCGATGGTTTGAAGAAAGGGAATAACCCTATCAGATCCTCCGAGGGCACAGGTGGGACTTACTTCATGCAAGATTCAGCAGGTATGGAGTATGTTTCAGTTTTCAAGCCCATGGATGAGGAGCCAAATGCGGTTAATAACCCTCAAGGCCTACCGGTTTCCTCTAATGGCGAAGGTTTAAAAATAGGGACAAAGGTTGGAGAAGGAGCTATGAGAGAAGTTGCAGCATATATATTAGATCATCCAAAAGCTGGGCCACGGTTGGTGACAGGTGAAGCACTAGGCTTTGCTGGGGTTCCCCCAACTGTTATGGTCCAGTGCTTACACCAAGCCTTTAACCACCCAGATGGGTTTGATTACTCCTCAAAGCATTCCAAGGTGGGGTCCCTGCAGATGTTTATGAGCAATGATGGTAACTGTGAGGACCTTGGACCAGGGGCTTTTTCTGCGGAGGAGGTGCATAAGATCACCGTGCTTGATCTAAGAATGGCTAATGCAGATAGGCATGCTGGAAATATATTGTTCAGGAAAGAGGCAGGTGGTCACACTTTGCTCATTCCCATTGATCATGGCTACTGTCTTCCAGAGAAATTTGAGGATTGTACATTTGATTGGCTTTATTGGCCCCAAGCACGTCAGCCTTACTCCCCTGATACGGTTGATTATATCAAATCTCTGGATGCCGAGAAAGACATAGAGCTTCTGAAATATTTCGGGTGGGATGTCCCGGTTGAGTGTGCACGAACACTCCGAATCTCCACAATGTTATTGAAGAAAGGGGTTGAGAGAGGTCTCACTCCTTATGACATTGGAAGCATTATGTGTAGGGAAAATTTGAACAAAGAATCTGTCATCGAGGAGATTATTTGTGAAGCCCAAGAATCATTGCTACCTGGCATGGAGGAATCTGTGTTTCTTGAATCTGTCTCCCAGATCATGGATTCCCGCCTTGATAAGCTTTCAAAATAG 1710 0.4579 MSVSEVAVRPILKKSVHWQGRCSGESIRIYLTVDGALRPMRVLESDSIASVKMRIQACKGIAGKKHKLVYGGRELARKDALIKDYGVTAGNVLHLVLRLSDMIFIVVRTACGKEFEFQIDRHRNVGYLKQRIKKKKGEGFIDLEGDQELFCGGEELHDQRLFRDICNTDDADGVIHLVVRNSAKVNAKPVHKDLELSVVADGSAEGEKENQVTPKIPPPGLDFWLEPVFVNPKVSFFPFLWDLIGSTFDGLKKGNNPIRSSEGTGGTYFMQDSAGMEYVSVFKPMDEEPNAVNNPQGLPVSSNGEGLKIGTKVGEGAMREVAAYILDHPKAGPRLVTGEALGFAGVPPTVMVQCLHQAFNHPDGFDYSSKHSKVGSLQMFMSNDGNCEDLGPGAFSAEEVHKITVLDLRMANADRHAGNILFRKEAGGHTLLIPIDHGYCLPEKFEDCTFDWLYWPQARQPYSPDTVDYIKSLDAEKDIELLKYFGWDVPVECARTLRISTMLLKKGVERGLTPYDIGSIMCRENLNKESVIEEIICEAQESLLPGMEESVFLESVSQIMDSRLDKLSK 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02264 569 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 569 - -
Gma01g02264 569 Gene3D - 26 101 - -
Gma01g02264 569 CDD Ubl_ubiquitin_like 105 178 - -
Gma01g02264 569 Pfam Phosphatidylinositol 3- and 4-kinase 263 516 IPR000403 -
Gma01g02264 569 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 254 551 IPR000403 -
Gma01g02264 569 SMART ubq_7 103 180 IPR000626 GO:0005515
Gma01g02264 569 SMART ubq_7 27 98 IPR000626 GO:0005515
Gma01g02264 569 ProSiteProfiles Ubiquitin domain profile. 27 102 IPR000626 GO:0005515
Gma01g02264 569 SUPERFAMILY Protein kinase-like (PK-like) 410 567 IPR011009 -
Gma01g02264 569 SUPERFAMILY Ubiquitin-like 99 180 IPR029071 -
Gma01g02264 569 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 569 IPR044571 -
Gma01g02264 569 Pfam Ubiquitin family 105 181 IPR000626 GO:0005515
Gma01g02264 569 Pfam Ubiquitin family 39 99 IPR000626 GO:0005515
Gma01g02264 569 SUPERFAMILY Ubiquitin-like 32 100 IPR029071 -
Gma01g02264 569 Gene3D - 102 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02264 Gma-Chr1 57799813 57802839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02264 1 568 Acyl Lipid Metabolism Gene Families AT5G24240 55.536 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02264 - - gmx:100787492 1157.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02264 01 57799813 57802839 Gma01g02264 01 57799813 57802839 ECH
Gma01g02264 01 57799813 57802839 Gma07g00518 07 4971510 4974782 ECH
Gma01g02264 01 57799813 57802839 Gma03g02368 03 48816258 48818197 ECH
Gma01g02264 01 57799813 57802839 Gma19g02412 19 52623381 52626113 ECH
Gma01g02264 01 57799813 57802839 Gma16g00217 16 2355877 2359468 ECH
Gma01g02264 01 57799813 57802839 Gma11g00150 11 1171052 1172487 GST
Gma01g02264 01 57799813 57802839 Gma05g02119 05 42399490 42401751 PCT
Gma01g02264 01 57799813 57802839 Gma08g00225 08 1915950 1918371 PCT