Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00518 ATGTCATCTGCTGGTGTCACCACTCTTAGCCCTGTTCCCAGGGAGCTATTGTTGTCCCCAGATGGATACTATACCCCATTGCACTTGTCATTGGATCGAGAGTTTATTTTCATATATCTGTCCTATTTTGGATCTTTGACTCCAATGCGAGTTCTTCCCTGCGATACCATTGAGTCCGTGAAACTCAAAATCCAGAAGTCTGAGGGGCTTCCTTCATTGACAAACAAACAAAAGTTGGTCTGTGATGGGCGGGAACTAGCACGGAGCAATTCCCTGCTGAAAGAATATGGGGTTACGGAAGGAAATGTTTTGCATTTGGTGATTAGGCTGTCGGATCTCCAGACCATCAGTGTGAGAACTTCTTCCGGAAAGGACTTTACTTTTCAGGTGGAGAGATGCAGAGATGTCGGGTACATTAAGCAACAGATTGGGAAAAAGGAGAAGTGCTTTGCTGATCCTGAACAGCAGGAAGTTATGTGTAATGGCAAGCTGCTTGAGGATCAGATGCTTATTGATGATATCTGCAGTAAATATAACGATGCAGTGATTCATCTTTTTGTTAGAGTGAAATATGCAGAAGTTAGGACGGGACAAGATGAGTTGTCCGTCGTGGCAAAGGAGTTGAATGATACAAAAGATTATGAAACTAATTGTAGGAGAAAATATGATATTAGTAAAGAAGATACAAGAAGGGAGTATGGAGTCGTTGAGCCAATTATGCCAAGGAAGGCTCTTGATAGGGATCTTCTTTTGGAGCCGGTTATTGTTAACAAAAAAATTGAATTAGCTTCTGAGATTTGGAATATGATAAACTCTACATATGAAGGGCTAGACATTGGAAATTATCCAATCAGATCTGCAGAGGGTACAGGGGGTGCTTACTTTATGCTTGATTCAACCGGGCAAAAGTATATATCTGTTTTTAAGCCCATTGATGAAGAGCCAATGGCTGTGAATAACCCTAGGGGTTTACCTTTCTCAGAAGACGGTGAAGGCTTAAAGAAGGGAACAACAGTTGGTCAGGGAGCATTCAGGGAAGTTGCAGCTTATATTTTGGATCACCCAATGAGTGGTCGCCGATCATTATTTGGTGATGAGAAGGGTTTTGCCGGGGTTCCCCCGACAGTTATGGTTAAGTGCTTGCATAAAGGATTTAACCATCCCGGGGAGTTGACTACTAAGATTGGCTCCTTGCAAATGTTCATAGAGAATAATGGAAGCTGCGAGGATATGGGCCCTGGGGCTTTCCCAGTGAAGGAAGTGCATAAAATTTCAGTAGTGGACATGCGACTCGCAAACGCAGATAGACATGCTGGGAATATTTTGATCGGCAAAGTGGAGGAAAATGGCCAGGCTGTTTTGATTCCAATTGATCATGGATACTGCTTGCCCAAAAGTTTTGAGGATTGTACCTTCGAATGGCTTTATTGGCCTCAAGCTCGCCAGCCATACTCTCCAGAGATCATTGACTATATAAAGTCACTGGATGCTGATGAAGATATTGCCCTTTTGAAGTTTCATGGATGGAATCTGCCAGTTGAATGCGCGCGCACTCTTCAAATCTCAACCATGCTTCTGAAGAAAGGAGTGAAGAGAGGGATGACCCCCTTTGCCATTGGAAGCCTTATGTGCAGGGAATCCTTGAACAAGGAGTCTGTGATTGAGGGAATTGTAAAGGCAGCTCTGGATTCTGTTCTTCCTTGCACAAGTGAAGCCACATTTCTGGATACTGTTTCCGAAATCATGGACCAGCACCTTGATGAGATCACGGGTTCCATTTCTTAA 1785 0.4347 MSSAGVTTLSPVPRELLLSPDGYYTPLHLSLDREFIFIYLSYFGSLTPMRVLPCDTIESVKLKIQKSEGLPSLTNKQKLVCDGRELARSNSLLKEYGVTEGNVLHLVIRLSDLQTISVRTSSGKDFTFQVERCRDVGYIKQQIGKKEKCFADPEQQEVMCNGKLLEDQMLIDDICSKYNDAVIHLFVRVKYAEVRTGQDELSVVAKELNDTKDYETNCRRKYDISKEDTRREYGVVEPIMPRKALDRDLLLEPVIVNKKIELASEIWNMINSTYEGLDIGNYPIRSAEGTGGAYFMLDSTGQKYISVFKPIDEEPMAVNNPRGLPFSEDGEGLKKGTTVGQGAFREVAAYILDHPMSGRRSLFGDEKGFAGVPPTVMVKCLHKGFNHPGELTTKIGSLQMFIENNGSCEDMGPGAFPVKEVHKISVVDMRLANADRHAGNILIGKVEENGQAVLIPIDHGYCLPKSFEDCTFEWLYWPQARQPYSPEIIDYIKSLDADEDIALLKFHGWNLPVECARTLQISTMLLKKGVKRGMTPFAIGSLMCRESLNKESVIEGIVKAALDSVLPCTSEATFLDTVSEIMDQHLDEITGSIS 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00518 594 Gene3D - 40 111 - -
Gma07g00518 594 ProSiteProfiles Ubiquitin domain profile. 36 109 IPR000626 GO:0005515
Gma07g00518 594 CDD Ubl_ubiquitin_like 116 186 - -
Gma07g00518 594 SMART ubq_7 36 109 IPR000626 GO:0005515
Gma07g00518 594 SMART ubq_7 114 188 IPR000626 GO:0005515
Gma07g00518 594 SUPERFAMILY Ubiquitin-like 109 189 IPR029071 -
Gma07g00518 594 Pfam Ubiquitin family 116 189 IPR000626 GO:0005515
Gma07g00518 594 Pfam Ubiquitin family 47 110 IPR000626 GO:0005515
Gma07g00518 594 Gene3D - 114 190 - -
Gma07g00518 594 SUPERFAMILY Ubiquitin-like 29 110 IPR029071 -
Gma07g00518 594 Pfam Phosphatidylinositol 3- and 4-kinase 289 538 IPR000403 -
Gma07g00518 594 ProSiteProfiles Ubiquitin domain profile. 114 173 IPR000626 GO:0005515
Gma07g00518 594 SUPERFAMILY Protein kinase-like (PK-like) 424 590 IPR011009 -
Gma07g00518 594 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 593 IPR044571 -
Gma07g00518 594 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 280 573 IPR000403 -
Gma07g00518 594 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00518 Gma-Chr7 4971510 4974782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00518 1 588 Acyl Lipid Metabolism Gene Families AT5G24240 54.774 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00518 - - gmx:100792568 1197.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00518 07 4971510 4974782 Gma07g00518 07 4971510 4974782 ECH
Gma07g00518 07 4971510 4974782 Gma03g02368 03 48816258 48818197 ECH
Gma01g02264 01 57799813 57802839 Gma07g00518 07 4971510 4974782 ECH
Gma05g02119 05 42399490 42401751 Gma07g00518 07 4971510 4974782 ECH
Gma08g00225 08 1915950 1918371 Gma07g00518 07 4971510 4974782 ECH
Gma07g00518 07 4971510 4974782 Gma16g00217 16 2355877 2359468 GST
Gma19g02412 19 52623381 52626113 Gma07g00518 07 4971510 4974782 PCT
Gma03g02368 03 48816258 48818197 Gma07g00518 07 4971510 4974782 PCT
Gma07g00518 07 4971510 4974782 Gma19g02412 19 52623381 52626113 PCT
Gma07g00518 07 4971510 4974782 Gma03g02368 03 48816258 48818197 PCT