Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02368 ATGTCATCAGCTGGTGTCTCTACACTTACTGTGGTTCCCACTGAGCCATTGTTGTCACCAAAGGCATTCCCTTTTCCAATTCCATCACACTTGTCTTTGGAAGATAAATCCATTTTCATATACCTCTCCTTTTCGGGCTCATTGACTCCCATCCGTGTTATGGAGTGGGATACCATTGAATCTGTCAAATTCAAAATCCAAAGGTGTGAAAGCCTTCCATTTTTAACAAACAAGCAGAAGTTGGTTTATGCTGGCCGAGAGCTTGCGCGAAGTGATACGCCGCTCAAGGACTATGGAGTAACGGATGGAAATGTTTTGCATTTGGTAATCAAACTGTCAGATCTTCAGGTCATCAATGTGAAAACTTCTTGTGGGAAGGAGTTCACGTTTCAGGTCGAACGAGGCAGGGATGTCGGGTACATAAAGCAGCGGATCGCCAGAAGGGAGAAACAGTTTGATGATCCTGAGGAGCAGGAGCTTGTGTGCAATGGGGAAAGGCTTGAGGACCAGAGGCTTATTGATGATATCTGTTGCAAACATAATGATGCAGCAGTCCATCTGTTTGTGAGAAAAAAGCATGTTAAAGTTCAGAGGAGACCCCTTGAGTTGTCCATTGTAGCAAAAGATTTGATTGATAAGAAAAAAAATGATGTCAATGGAAATACTAATCGGAGAAGTTATGATGTTGGTAAAGAAGATACTATTAGGAAGTCTGATGTCATTCAAAGAGCTGTGCCGAGAAAGCCTCCTGGTAGAGATTTTATTTTGGAGCCAGTTATTATTAACCATAAAATTGAATTAGCTCCAGCTATTCGGAATATGGTGAACTCTACATATGAGGGACTTGGCAGTGGAAAATGTCCAATCAGATCTGCAGAGGGTACAGGAGGAGCTTACTTTATGCTTGATTCAGCAGAGCAAAAGTATGTGTCTGTTTTTAAGCCTATTGATGAAGAACCAATGGCTGTGAATAACCCTCGAGGTCTTCCTTTGTCATTAGATGGTGAAGGCTTAAAAAAGGGTACAAGAGTTGGTCAAGGAGCATTCAGGGAAGTAGCAGCCTATGTTCTAGACCATCCATTGAGTGGGTGCCAGCGCCACTCATTATTTGGTGATGGGAAGGGCTTTGCTGGTGTTCCCCCAACATTGATGGTTAAGTGCTTGCATAAAGCATTCAACTATCCCCGAGAATTGACTCCTAAGATTGGCTCCTTGCAAATGTTCACAGAAAATAGTGGAAGTTGTGAAGATATGGGCCCGGGGGCTTTCCCAGTAAAGGAGGTACATAAAATTACTGTTTTGGACATAAGACTGGCAAATGCAGATAGGCATGCTGGGAATATTTTGATCAGCAAAGAGGAGGACAACAACCAGTCTGTTCTGATTCCAATTGATCATGGATACTGCTTGCCCACAAGTTTTGAAGATTGCACCTTTGAATGGCTTTACTGGCCTCAAGCTCGCCAGCCATACTCCTCAGAAACTATTGACTACATAAAGTCACTGGATGCTGAAGAAGACATTGCCCTTTTGAAGTTTCATGGATGGGATCTGCCAGTTGAATGTGCCCGCACTCTTAGGATCTCAACCATGCTTTTGAAGAAAGGGGTAGAGAGAGGATTGACCCCTTTTGCCATTGGAAGCCTGATGTGCAGGGAATCCTTGAACAAGGAATCTGTGATAGAAGAAGTAGTACAAGCAGCACTGGATTCTGTTCTTCCTGGCACAAGTGAAGCTACATTGCTGGATTCTGTTTCCCAAATCCTGGACTTGCACCTCGATGAGATTGTCAGATCTCATTTATAA 1806 0.4324 MSSAGVSTLTVVPTEPLLSPKAFPFPIPSHLSLEDKSIFIYLSFSGSLTPIRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTPLKDYGVTDGNVLHLVIKLSDLQVINVKTSCGKEFTFQVERGRDVGYIKQRIARREKQFDDPEEQELVCNGERLEDQRLIDDICCKHNDAAVHLFVRKKHVKVQRRPLELSIVAKDLIDKKKNDVNGNTNRRSYDVGKEDTIRKSDVIQRAVPRKPPGRDFILEPVIINHKIELAPAIRNMVNSTYEGLGSGKCPIRSAEGTGGAYFMLDSAEQKYVSVFKPIDEEPMAVNNPRGLPLSLDGEGLKKGTRVGQGAFREVAAYVLDHPLSGCQRHSLFGDGKGFAGVPPTLMVKCLHKAFNYPRELTPKIGSLQMFTENSGSCEDMGPGAFPVKEVHKITVLDIRLANADRHAGNILISKEEDNNQSVLIPIDHGYCLPTSFEDCTFEWLYWPQARQPYSSETIDYIKSLDAEEDIALLKFHGWDLPVECARTLRISTMLLKKGVERGLTPFAIGSLMCRESLNKESVIEEVVQAALDSVLPGTSEATLLDSVSQILDLHLDEIVRSHL 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02368 601 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 599 IPR044571 -
Gma03g02368 601 Pfam Phosphatidylinositol 3- and 4-kinase 294 545 IPR000403 -
Gma03g02368 601 SUPERFAMILY Protein kinase-like (PK-like) 437 596 IPR011009 -
Gma03g02368 601 Gene3D - 118 204 - -
Gma03g02368 601 ProSiteProfiles Ubiquitin domain profile. 36 111 IPR000626 GO:0005515
Gma03g02368 601 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 599 - -
Gma03g02368 601 Gene3D - 32 117 - -
Gma03g02368 601 CDD Ubl_ubiquitin_like 118 188 - -
Gma03g02368 601 Pfam Ubiquitin family 118 191 IPR000626 GO:0005515
Gma03g02368 601 Pfam Ubiquitin family 40 112 IPR000626 GO:0005515
Gma03g02368 601 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 285 580 IPR000403 -
Gma03g02368 601 SUPERFAMILY Ubiquitin-like 111 192 IPR029071 -
Gma03g02368 601 ProSiteProfiles Ubiquitin domain profile. 118 175 IPR000626 GO:0005515
Gma03g02368 601 SMART ubq_7 38 111 IPR000626 GO:0005515
Gma03g02368 601 SMART ubq_7 116 190 IPR000626 GO:0005515
Gma03g02368 601 SUPERFAMILY Ubiquitin-like 43 113 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02368 Gma-Chr3 48816258 48818197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02368 35 595 Acyl Lipid Metabolism Gene Families AT5G24240 54.754 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02368 - - gmx:100817301 1208.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02368 03 48816258 48818197 Gma03g02368 03 48816258 48818197 ECH
Gma07g00518 07 4971510 4974782 Gma03g02368 03 48816258 48818197 ECH
Gma01g02264 01 57799813 57802839 Gma03g02368 03 48816258 48818197 ECH
Gma05g02119 05 42399490 42401751 Gma03g02368 03 48816258 48818197 ECH
Gma08g00225 08 1915950 1918371 Gma03g02368 03 48816258 48818197 ECH
Gma19g02412 19 52623381 52626113 Gma03g02368 03 48816258 48818197 GST
Gma03g02368 03 48816258 48818197 Gma07g00518 07 4971510 4974782 PCT
Gma03g02368 03 48816258 48818197 Gma16g00217 16 2355877 2359468 PCT
Gma07g00518 07 4971510 4974782 Gma03g02368 03 48816258 48818197 PCT
Gma16g00217 16 2355877 2359468 Gma03g02368 03 48816258 48818197 PCT